RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 BLMP54132 1417 aaPredicted RBP16.35■□□□□ 0.21
APOC1-206ENST00000590334 PPP2R1AP30153 589 aa16.34■□□□□ 0.21
APOC1-206ENST00000590334 IP6K1Q92551 441 aa16.34■□□□□ 0.21
APOC1-206ENST00000590334 FLT4P35916 1363 aa16.34■□□□□ 0.21
APOC1-206ENST00000590334 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.21
APOC1-206ENST00000590334 CHRNA2Q15822 529 aa16.33■□□□□ 0.2
APOC1-206ENST00000590334 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
APOC1-206ENST00000590334 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
APOC1-206ENST00000590334 INSRP06213 1382 aa16.33■□□□□ 0.2
APOC1-206ENST00000590334 ANP32CO43423 234 aa16.32■□□□□ 0.2
APOC1-206ENST00000590334 COL5A2P05997 1499 aaPredicted RBP16.32■□□□□ 0.2
APOC1-206ENST00000590334 HOXC9P31274 260 aa16.32■□□□□ 0.2
APOC1-206ENST00000590334 FNBP4Q8N3X1 1017 aaPredicted RBP16.32■□□□□ 0.2
APOC1-206ENST00000590334 MYBBP1AQ9BQG0 1328 aaKnown RBP16.32■□□□□ 0.2
APOC1-206ENST00000590334 RGPD1P0DJD0 1748 aa16.31■□□□□ 0.2
APOC1-206ENST00000590334 COL3A1P02461 1466 aaPredicted RBP16.31■□□□□ 0.2
APOC1-206ENST00000590334 AMPHP49418 695 aa16.31■□□□□ 0.2
APOC1-206ENST00000590334 MTHFSP49914 203 aa16.31■□□□□ 0.2
APOC1-206ENST00000590334 MEX3CQ5U5Q3 659 aaKnown RBP16.31■□□□□ 0.2
APOC1-206ENST00000590334 C8orf37Q96NL8 207 aa16.31■□□□□ 0.2
APOC1-206ENST00000590334 AXIN2Q9Y2T1 843 aa16.31■□□□□ 0.2
APOC1-206ENST00000590334 BCL9LQ86UU0 1499 aa16.3■□□□□ 0.2
APOC1-206ENST00000590334 NGLY1Q96IV0 654 aa16.3■□□□□ 0.2
APOC1-206ENST00000590334 BTG4Q9NY30 223 aa16.29■□□□□ 0.2
APOC1-206ENST00000590334 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
APOC1-206ENST00000590334 ZBTB7CA1YPR0 619 aa16.28■□□□□ 0.2
APOC1-206ENST00000590334 HSP90AB2PQ58FF8 381 aa16.28■□□□□ 0.2
APOC1-206ENST00000590334 ERBB3P21860 1342 aa16.27■□□□□ 0.2
APOC1-206ENST00000590334 AFF2P51816 1311 aa16.27■□□□□ 0.2
APOC1-206ENST00000590334 PPM1GO15355 546 aaPredicted RBP16.27■□□□□ 0.2
APOC1-206ENST00000590334 WDR17Q8IZU2 1322 aa16.25■□□□□ 0.19
APOC1-206ENST00000590334 UNC5CLQ8IV45 518 aa16.25■□□□□ 0.19
APOC1-206ENST00000590334 ANKRD24Q8TF21 1146 aa16.25■□□□□ 0.19
APOC1-206ENST00000590334 CFAP53Q96M91 514 aa16.24■□□□□ 0.19
APOC1-206ENST00000590334 USP21Q9UK80 565 aa16.24■□□□□ 0.19
APOC1-206ENST00000590334 ATRNO75882 1429 aa16.24■□□□□ 0.19
APOC1-206ENST00000590334 CRB1P82279 1406 aa16.24■□□□□ 0.19
APOC1-206ENST00000590334 NCAPD2Q15021 1401 aa16.24■□□□□ 0.19
APOC1-206ENST00000590334 EIF4A2Q14240 407 aaKnown RBP16.23■□□□□ 0.19
APOC1-206ENST00000590334 IL13P35225 146 aa16.22■□□□□ 0.19
APOC1-206ENST00000590334 EVA1CP58658 441 aa16.22■□□□□ 0.19
APOC1-206ENST00000590334 VPS72Q15906 364 aa16.22■□□□□ 0.19
APOC1-206ENST00000590334 GLI3P10071 1580 aa16.21■□□□□ 0.19
APOC1-206ENST00000590334 DIAPH1O60610 1272 aaKnown RBP16.21■□□□□ 0.19
APOC1-206ENST00000590334 ZNF772Q68DY9 489 aaPredicted RBP16.21■□□□□ 0.19
APOC1-206ENST00000590334 LARP1Q6PKG0 1096 aaKnown RBP16.21■□□□□ 0.19
APOC1-206ENST00000590334 STRN4Q9NRL3 753 aa16.21■□□□□ 0.19
APOC1-206ENST00000590334 PARP4Q9UKK3 1724 aaKnown RBP16.21■□□□□ 0.19
APOC1-206ENST00000590334 CARD10Q9BWT7 1032 aa16.2■□□□□ 0.18
APOC1-206ENST00000590334 SPATA31A5Q5VU36 1347 aa16.19■□□□□ 0.18
APOC1-206ENST00000590334 SPATA31A7Q8IWB4 1347 aa16.19■□□□□ 0.18
APOC1-206ENST00000590334 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
APOC1-206ENST00000590334 LTV1Q96GA3 475 aaPredicted RBP16.19■□□□□ 0.18
APOC1-206ENST00000590334 RGS17Q9UGC6 210 aaPredicted RBP16.19■□□□□ 0.18
APOC1-206ENST00000590334 TRPC5Q9UL62 973 aaPredicted RBP16.19■□□□□ 0.18
APOC1-206ENST00000590334 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
APOC1-206ENST00000590334 CSB-PGBD3P0DP91 1061 aa16.18■□□□□ 0.18
APOC1-206ENST00000590334 NBPF6Q5VWK0 638 aa16.18■□□□□ 0.18
APOC1-206ENST00000590334 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
APOC1-206ENST00000590334 NBPF4Q96M43 638 aa16.18■□□□□ 0.18
APOC1-206ENST00000590334 EYA1Q99502 592 aa16.18■□□□□ 0.18
APOC1-206ENST00000590334 THSD7AQ9UPZ6 1657 aa16.18■□□□□ 0.18
APOC1-206ENST00000590334 KDRP35968 1356 aa16.17■□□□□ 0.18
APOC1-206ENST00000590334 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
APOC1-206ENST00000590334 MIER1Q8N108 512 aa16.17■□□□□ 0.18
APOC1-206ENST00000590334 QTRT2Q9H974 415 aaKnown RBP16.17■□□□□ 0.18
APOC1-206ENST00000590334 THRAP3Q9Y2W1 955 aaKnown RBP16.17■□□□□ 0.18
APOC1-206ENST00000590334 PKD1L3Q7Z443 1732 aa16.16■□□□□ 0.18
APOC1-206ENST00000590334 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
APOC1-206ENST00000590334 GJD4Q96KN9 370 aaPredicted RBP16.16■□□□□ 0.18
APOC1-206ENST00000590334 NLRP2Q9NX02 1062 aa16.16■□□□□ 0.18
APOC1-206ENST00000590334 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
APOC1-206ENST00000590334 SHANK3Q9BYB0 1731 aa16.16■□□□□ 0.18
APOC1-206ENST00000590334 PLEKHG2Q9H7P9 1386 aa16.15■□□□□ 0.18
APOC1-206ENST00000590334 DISP2A7MBM2 1401 aa16.15■□□□□ 0.18
APOC1-206ENST00000590334 PHF23Q9BUL5 403 aaPredicted RBP16.15■□□□□ 0.18
APOC1-206ENST00000590334 BARGINQ6ZT62 677 aa16.14■□□□□ 0.17
APOC1-206ENST00000590334 TCP11L2Q8N4U5 519 aa16.14■□□□□ 0.17
APOC1-206ENST00000590334 LRRC37A3O60309 1634 aa16.14■□□□□ 0.17
APOC1-206ENST00000590334 BRWD3Q6RI45 1802 aa16.13■□□□□ 0.17
APOC1-206ENST00000590334 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
APOC1-206ENST00000590334 ONECUT3O60422 494 aaPredicted RBP16.12■□□□□ 0.17
APOC1-206ENST00000590334 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
APOC1-206ENST00000590334 MEGF6O75095 1541 aa16.11■□□□□ 0.17
APOC1-206ENST00000590334 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
APOC1-206ENST00000590334 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
APOC1-206ENST00000590334 SULT6B1Q6IMI4 303 aa16.11■□□□□ 0.17
APOC1-206ENST00000590334 POTEAQ6S8J7 498 aa16.11■□□□□ 0.17
APOC1-206ENST00000590334 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
APOC1-206ENST00000590334 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
APOC1-206ENST00000590334 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
APOC1-206ENST00000590334 OVOS2A0A0G2JMS6 1433 aa16.11■□□□□ 0.17
APOC1-206ENST00000590334 AEBP1Q8IUX7 1158 aa16.1■□□□□ 0.17
APOC1-206ENST00000590334 CDCA7Q9BWT1 371 aaPredicted RBP16.1■□□□□ 0.17
APOC1-206ENST00000590334 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
APOC1-206ENST00000590334 FCHSD2O94868 740 aa16.09■□□□□ 0.17
APOC1-206ENST00000590334 U2AF1L5P0DN76 240 aaPredicted RBP16.09■□□□□ 0.17
APOC1-206ENST00000590334 IL2RBP14784 551 aa16.09■□□□□ 0.17
APOC1-206ENST00000590334 U2AF1Q01081 240 aaKnown RBP eCLIP16.09■□□□□ 0.17
APOC1-206ENST00000590334 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms