RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 C11orf95C9JLR9 678 aaPredicted RBP25.46■■□□□ 1.67
DDX39A-212ENST00000590260 CDCA8Q53HL2 280 aa25.46■■□□□ 1.67
DDX39A-212ENST00000590260 CARD14Q9BXL6 1004 aa25.46■■□□□ 1.67
DDX39A-212ENST00000590260 ABCC6O95255 1503 aa25.43■■□□□ 1.66
DDX39A-212ENST00000590260 KIF20BQ96Q89 1820 aa25.42■■□□□ 1.66
DDX39A-212ENST00000590260 FYB1O15117 783 aa25.42■■□□□ 1.66
DDX39A-212ENST00000590260 EVA1CP58658 441 aa25.42■■□□□ 1.66
DDX39A-212ENST00000590260 CRB1P82279 1406 aa25.41■■□□□ 1.66
DDX39A-212ENST00000590260 FBLN1P23142 703 aa25.41■■□□□ 1.66
DDX39A-212ENST00000590260 USP35Q9P2H5 1018 aa25.4■■□□□ 1.66
DDX39A-212ENST00000590260 NSD3Q9BZ95 1437 aa25.38■■□□□ 1.65
DDX39A-212ENST00000590260 WNK3Q9BYP7 1800 aa25.38■■□□□ 1.65
DDX39A-212ENST00000590260 BARGINQ6ZT62 677 aa25.38■■□□□ 1.65
DDX39A-212ENST00000590260 KRT27Q7Z3Y8 459 aa25.38■■□□□ 1.65
DDX39A-212ENST00000590260 WDR17Q8IZU2 1322 aa25.37■■□□□ 1.65
DDX39A-212ENST00000590260 GGNBP2Q9H3C7 697 aa25.37■■□□□ 1.65
DDX39A-212ENST00000590260 PARP4Q9UKK3 1724 aaKnown RBP25.37■■□□□ 1.65
DDX39A-212ENST00000590260 A0A0G2JS52 829 aa25.35■■□□□ 1.65
DDX39A-212ENST00000590260 MYT1Q01538 1121 aa25.35■■□□□ 1.65
DDX39A-212ENST00000590260 FAM182BQ5T319 152 aa25.35■■□□□ 1.65
DDX39A-212ENST00000590260 TCP11L2Q8N4U5 519 aa25.35■■□□□ 1.65
DDX39A-212ENST00000590260 COG3Q96JB2 828 aa25.35■■□□□ 1.65
DDX39A-212ENST00000590260 POLR3GLQ9BT43 218 aa25.33■■□□□ 1.65
DDX39A-212ENST00000590260 LRRC37A3O60309 1634 aa25.33■■□□□ 1.65
DDX39A-212ENST00000590260 THRAP3Q9Y2W1 955 aaKnown RBP25.32■■□□□ 1.64
DDX39A-212ENST00000590260 MAP3K19Q56UN5 1328 aa25.32■■□□□ 1.64
DDX39A-212ENST00000590260 TOM1L2Q6ZVM7 507 aa25.31■■□□□ 1.64
DDX39A-212ENST00000590260 PEAK1Q9H792 1746 aa25.31■■□□□ 1.64
DDX39A-212ENST00000590260 ERBB3P21860 1342 aa25.31■■□□□ 1.64
DDX39A-212ENST00000590260 DISP2A7MBM2 1401 aa25.3■■□□□ 1.64
DDX39A-212ENST00000590260 KIF7Q2M1P5 1343 aa25.29■■□□□ 1.64
DDX39A-212ENST00000590260 IP6K1Q92551 441 aa25.28■■□□□ 1.64
DDX39A-212ENST00000590260 CARD10Q9BWT7 1032 aa25.28■■□□□ 1.64
DDX39A-212ENST00000590260 BLMP54132 1417 aaPredicted RBP25.28■■□□□ 1.64
DDX39A-212ENST00000590260 ANKRD26Q9UPS8 1709 aa25.26■■□□□ 1.63
DDX39A-212ENST00000590260 RRS1Q15050 365 aaKnown RBP25.26■■□□□ 1.63
DDX39A-212ENST00000590260 ANKRD24Q8TF21 1146 aa25.26■■□□□ 1.63
DDX39A-212ENST00000590260 TNS1Q9HBL0 1735 aaKnown RBP25.26■■□□□ 1.63
DDX39A-212ENST00000590260 HOXC9P31274 260 aa25.25■■□□□ 1.63
DDX39A-212ENST00000590260 PANK3Q9H999 370 aa25.25■■□□□ 1.63
DDX39A-212ENST00000590260 RGPD2P0DJD1 1756 aa25.25■■□□□ 1.63
DDX39A-212ENST00000590260 CSB-PGBD3P0DP91 1061 aa25.24■■□□□ 1.63
DDX39A-212ENST00000590260 FAM208AQ9UK61 1670 aaKnown RBP25.23■■□□□ 1.63
DDX39A-212ENST00000590260 CCDC125Q86Z20 511 aa25.22■■□□□ 1.63
DDX39A-212ENST00000590260 CCDC7Q96M83 1385 aa25.21■■□□□ 1.63
DDX39A-212ENST00000590260 RGPD1P0DJD0 1748 aa25.21■■□□□ 1.63
DDX39A-212ENST00000590260 RTL1A6NKG5 1358 aa25.2■■□□□ 1.63
DDX39A-212ENST00000590260 CGNL1Q0VF96 1302 aa25.2■■□□□ 1.62
DDX39A-212ENST00000590260 DEFB132Q7Z7B7 95 aa25.2■■□□□ 1.62
DDX39A-212ENST00000590260 AMPHP49418 695 aa25.18■■□□□ 1.62
DDX39A-212ENST00000590260 NLRP2Q9NX02 1062 aa25.18■■□□□ 1.62
DDX39A-212ENST00000590260 EMILIN1Q9Y6C2 1016 aa25.18■■□□□ 1.62
DDX39A-212ENST00000590260 PDE3BQ13370 1112 aa25.17■■□□□ 1.62
DDX39A-212ENST00000590260 LTV1Q96GA3 475 aaPredicted RBP25.17■■□□□ 1.62
DDX39A-212ENST00000590260 WASHC2AQ641Q2 1341 aa25.16■■□□□ 1.62
DDX39A-212ENST00000590260 MAP2P11137 1827 aaKnown RBP25.16■■□□□ 1.62
DDX39A-212ENST00000590260 SBF2Q86WG5 1849 aa25.15■■□□□ 1.62
DDX39A-212ENST00000590260 DDB1Q16531 1140 aa25.15■■□□□ 1.62
DDX39A-212ENST00000590260 HSP90AB2PQ58FF8 381 aa25.15■■□□□ 1.62
DDX39A-212ENST00000590260 FAM196AQ6ZSG2 479 aa25.15■■□□□ 1.62
DDX39A-212ENST00000590260 MARCH10Q8NA82 808 aaPredicted RBP25.15■■□□□ 1.62
DDX39A-212ENST00000590260 TNS2Q63HR2 1409 aa25.13■■□□□ 1.61
DDX39A-212ENST00000590260 CDCA7Q9BWT1 371 aaPredicted RBP25.13■■□□□ 1.61
DDX39A-212ENST00000590260 INSRP06213 1382 aa25.13■■□□□ 1.61
DDX39A-212ENST00000590260 FLT4P35916 1363 aa25.13■■□□□ 1.61
DDX39A-212ENST00000590260 TRIM37O94972 964 aa25.12■■□□□ 1.61
DDX39A-212ENST00000590260 KIF24Q5T7B8 1368 aa25.12■■□□□ 1.61
DDX39A-212ENST00000590260 OVOS2A0A0G2JMS6 1433 aa25.12■■□□□ 1.61
DDX39A-212ENST00000590260 POLKQ9UBT6 870 aa25.11■■□□□ 1.61
DDX39A-212ENST00000590260 SHANK3Q9BYB0 1731 aa25.1■■□□□ 1.61
DDX39A-212ENST00000590260 PER1O15534 1290 aaPredicted RBP25.1■■□□□ 1.61
DDX39A-212ENST00000590260 NBPF6Q5VWK0 638 aa25.1■■□□□ 1.61
DDX39A-212ENST00000590260 NBPF4Q96M43 638 aa25.1■■□□□ 1.61
DDX39A-212ENST00000590260 IL2RBP14784 551 aa25.09■■□□□ 1.61
DDX39A-212ENST00000590260 AMER1Q5JTC6 1135 aaPredicted RBP25.09■■□□□ 1.61
DDX39A-212ENST00000590260 PTF1AQ7RTS3 328 aa25.09■■□□□ 1.61
DDX39A-212ENST00000590260 NSD2O96028 1365 aa25.08■■□□□ 1.61
DDX39A-212ENST00000590260 MEGF6O75095 1541 aa25.08■■□□□ 1.61
DDX39A-212ENST00000590260 BCL9O00512 1426 aa25.08■■□□□ 1.61
DDX39A-212ENST00000590260 EN1Q05925 392 aaPredicted RBP25.07■■□□□ 1.6
DDX39A-212ENST00000590260 SMG6Q86US8 1419 aaKnown RBP25.06■■□□□ 1.6
DDX39A-212ENST00000590260 EXOC5O00471 708 aa25.06■■□□□ 1.6
DDX39A-212ENST00000590260 TNNT2P45379 298 aaPredicted RBP25.06■■□□□ 1.6
DDX39A-212ENST00000590260 SF3B2Q13435 895 aaKnown RBP25.06■■□□□ 1.6
DDX39A-212ENST00000590260 USHBP1Q8N6Y0 703 aa25.06■■□□□ 1.6
DDX39A-212ENST00000590260 NCAPD2Q15021 1401 aa25.05■■□□□ 1.6
DDX39A-212ENST00000590260 RREB1Q92766 1687 aa25.04■■□□□ 1.6
DDX39A-212ENST00000590260 BAG6P46379 1132 aa25.03■■□□□ 1.6
DDX39A-212ENST00000590260 KNSTRNQ9Y448 316 aa25.03■■□□□ 1.6
DDX39A-212ENST00000590260 PPM1GO15355 546 aaPredicted RBP25.02■■□□□ 1.6
DDX39A-212ENST00000590260 CAMKK2Q96RR4 588 aa25.02■■□□□ 1.6
DDX39A-212ENST00000590260 EZH2Q15910 746 aaKnown RBP25.01■■□□□ 1.59
DDX39A-212ENST00000590260 APBA3O96018 575 aa25■■□□□ 1.59
DDX39A-212ENST00000590260 NHSQ6T4R5 1651 aa25■■□□□ 1.59
DDX39A-212ENST00000590260 MORC1Q86VD1 984 aa24.99■■□□□ 1.59
DDX39A-212ENST00000590260 NUP188Q5SRE5 1749 aa24.98■■□□□ 1.59
DDX39A-212ENST00000590260 RGPD3A6NKT7 1758 aaPredicted RBP24.96■■□□□ 1.59
DDX39A-212ENST00000590260 RGPD4Q7Z3J3 1758 aa24.96■■□□□ 1.59
DDX39A-212ENST00000590260 KCNQ2O43526 872 aa24.96■■□□□ 1.59
DDX39A-212ENST00000590260 EIF4A2Q14240 407 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms