RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 CDCA7Q9BWT1 371 aaPredicted RBP27.14■■□□□ 1.94
PTBP1-215ENST00000589883 DDB1Q16531 1140 aa27.13■■□□□ 1.93
PTBP1-215ENST00000589883 WDR17Q8IZU2 1322 aa27.13■■□□□ 1.93
PTBP1-215ENST00000589883 AKAP12Q02952 1782 aa27.12■■□□□ 1.93
PTBP1-215ENST00000589883 SBNO2Q9Y2G9 1366 aa27.12■■□□□ 1.93
PTBP1-215ENST00000589883 ARHGEF25Q86VW2 580 aa27.12■■□□□ 1.93
PTBP1-215ENST00000589883 OVOS2A0A0G2JMS6 1433 aa27.12■■□□□ 1.93
PTBP1-215ENST00000589883 OVOS2A0A0J9YW53 1432 aa27.12■■□□□ 1.93
PTBP1-215ENST00000589883 CPSF1Q10570 1443 aaKnown RBP27.12■■□□□ 1.93
PTBP1-215ENST00000589883 OVOS2Q6IE36 1432 aa27.12■■□□□ 1.93
PTBP1-215ENST00000589883 KTN1Q86UP2 1357 aaKnown RBP27.11■■□□□ 1.93
PTBP1-215ENST00000589883 EIF4G2P78344 907 aaKnown RBP eCLIP27.11■■□□□ 1.93
PTBP1-215ENST00000589883 HSPA5P11021 654 aaKnown RBP27.1■■□□□ 1.93
PTBP1-215ENST00000589883 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
PTBP1-215ENST00000589883 TESK2Q96S53 571 aa27.1■■□□□ 1.93
PTBP1-215ENST00000589883 CSB-PGBD3P0DP91 1061 aa27.09■■□□□ 1.93
PTBP1-215ENST00000589883 COL18A1P39060 1754 aa27.09■■□□□ 1.93
PTBP1-215ENST00000589883 AXIN2Q9Y2T1 843 aa27.08■■□□□ 1.93
PTBP1-215ENST00000589883 SOX12O15370 315 aa27.07■■□□□ 1.92
PTBP1-215ENST00000589883 RREB1Q92766 1687 aa27.07■■□□□ 1.92
PTBP1-215ENST00000589883 CARD10Q9BWT7 1032 aa27.06■■□□□ 1.92
PTBP1-215ENST00000589883 LRRC37A3O60309 1634 aa27.04■■□□□ 1.92
PTBP1-215ENST00000589883 HDGFL2Q7Z4V5 671 aaPredicted RBP27.03■■□□□ 1.92
PTBP1-215ENST00000589883 NUP188Q5SRE5 1749 aa27.02■■□□□ 1.92
PTBP1-215ENST00000589883 ABCC6O95255 1503 aa27.02■■□□□ 1.92
PTBP1-215ENST00000589883 PLSCR1O15162 318 aa27.02■■□□□ 1.92
PTBP1-215ENST00000589883 TMC1Q8TDI8 760 aa27.02■■□□□ 1.92
PTBP1-215ENST00000589883 MON2Q7Z3U7 1717 aa27.02■■□□□ 1.92
PTBP1-215ENST00000589883 PEAK1Q9H792 1746 aa27.02■■□□□ 1.92
PTBP1-215ENST00000589883 CCDC7Q96M83 1385 aa27.01■■□□□ 1.91
PTBP1-215ENST00000589883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.01■■□□□ 1.91
PTBP1-215ENST00000589883 BCL11BQ9C0K0 894 aaPredicted RBP27.01■■□□□ 1.91
PTBP1-215ENST00000589883 USP31Q70CQ4 1352 aa27■■□□□ 1.91
PTBP1-215ENST00000589883 TMF1P82094 1093 aa27■■□□□ 1.91
PTBP1-215ENST00000589883 NFAT5O94916 1531 aa27■■□□□ 1.91
PTBP1-215ENST00000589883 WNK3Q9BYP7 1800 aa27■■□□□ 1.91
PTBP1-215ENST00000589883 EXOC5O00471 708 aa26.99■■□□□ 1.91
PTBP1-215ENST00000589883 RGPD5Q99666 1765 aa26.99■■□□□ 1.91
PTBP1-215ENST00000589883 BCL9O00512 1426 aa26.99■■□□□ 1.91
PTBP1-215ENST00000589883 SBF2Q86WG5 1849 aa26.98■■□□□ 1.91
PTBP1-215ENST00000589883 SLC24A1O60721 1099 aa26.98■■□□□ 1.91
PTBP1-215ENST00000589883 PUS7Q96PZ0 661 aaKnown RBP26.98■■□□□ 1.91
PTBP1-215ENST00000589883 TERF2IPQ9NYB0 399 aa26.98■■□□□ 1.91
PTBP1-215ENST00000589883 RGPD3A6NKT7 1758 aaPredicted RBP26.98■■□□□ 1.91
PTBP1-215ENST00000589883 RGPD4Q7Z3J3 1758 aa26.98■■□□□ 1.91
PTBP1-215ENST00000589883 MARCH10Q8NA82 808 aaPredicted RBP26.96■■□□□ 1.91
PTBP1-215ENST00000589883 SPON1Q9HCB6 807 aa26.94■■□□□ 1.9
PTBP1-215ENST00000589883 EDC4Q6P2E9 1401 aaKnown RBP26.93■■□□□ 1.9
PTBP1-215ENST00000589883 NME9Q86XW9 330 aa26.93■■□□□ 1.9
PTBP1-215ENST00000589883 SLC12A5Q9H2X9 1139 aa26.93■■□□□ 1.9
PTBP1-215ENST00000589883 USP54Q70EL1 1684 aa26.92■■□□□ 1.9
PTBP1-215ENST00000589883 CD163L1Q9NR16 1453 aa26.92■■□□□ 1.9
PTBP1-215ENST00000589883 PPP1R1BQ9UD71 204 aaPredicted RBP26.91■■□□□ 1.9
PTBP1-215ENST00000589883 ERBB3P21860 1342 aa26.9■■□□□ 1.9
PTBP1-215ENST00000589883 KCNQ2O43526 872 aa26.9■■□□□ 1.9
PTBP1-215ENST00000589883 POLR3GLQ9BT43 218 aa26.9■■□□□ 1.9
PTBP1-215ENST00000589883 NLRP2Q9NX02 1062 aa26.9■■□□□ 1.9
PTBP1-215ENST00000589883 NINLQ9Y2I6 1382 aa26.89■■□□□ 1.9
PTBP1-215ENST00000589883 TNS2Q63HR2 1409 aa26.89■■□□□ 1.89
PTBP1-215ENST00000589883 CDCA8Q53HL2 280 aa26.88■■□□□ 1.89
PTBP1-215ENST00000589883 A0A1W2PP64 1363 aa26.86■■□□□ 1.89
PTBP1-215ENST00000589883 IL2RBP14784 551 aa26.86■■□□□ 1.89
PTBP1-215ENST00000589883 LTN1O94822 1766 aa26.86■■□□□ 1.89
PTBP1-215ENST00000589883 DCAF8L1A6NGE4 600 aa26.84■■□□□ 1.89
PTBP1-215ENST00000589883 PTF1AQ7RTS3 328 aa26.84■■□□□ 1.89
PTBP1-215ENST00000589883 ANKRD24Q8TF21 1146 aa26.84■■□□□ 1.89
PTBP1-215ENST00000589883 TXNRD1Q16881 649 aa26.82■■□□□ 1.88
PTBP1-215ENST00000589883 STK32BQ9NY57 414 aa26.82■■□□□ 1.88
PTBP1-215ENST00000589883 PROM2Q8N271 834 aa26.81■■□□□ 1.88
PTBP1-215ENST00000589883 ANO8Q9HCE9 1232 aaPredicted RBP26.81■■□□□ 1.88
PTBP1-215ENST00000589883 IP6K1Q92551 441 aa26.79■■□□□ 1.88
PTBP1-215ENST00000589883 COG3Q96JB2 828 aa26.79■■□□□ 1.88
PTBP1-215ENST00000589883 KIF7Q2M1P5 1343 aa26.77■■□□□ 1.88
PTBP1-215ENST00000589883 NHSQ6T4R5 1651 aa26.76■■□□□ 1.87
PTBP1-215ENST00000589883 KAT6BQ8WYB5 2073 aa26.75■■□□□ 1.87
PTBP1-215ENST00000589883 ACSBG1Q96GR2 724 aa26.75■■□□□ 1.87
PTBP1-215ENST00000589883 SLC15A2Q16348 729 aa26.74■■□□□ 1.87
PTBP1-215ENST00000589883 CASZ1Q86V15 1759 aa26.74■■□□□ 1.87
PTBP1-215ENST00000589883 FAM208AQ9UK61 1670 aaKnown RBP26.73■■□□□ 1.87
PTBP1-215ENST00000589883 AMPHP49418 695 aa26.72■■□□□ 1.87
PTBP1-215ENST00000589883 ANKRD36BQ8N2N9 1353 aa26.71■■□□□ 1.87
PTBP1-215ENST00000589883 MYOM1P52179 1685 aa26.71■■□□□ 1.87
PTBP1-215ENST00000589883 LTV1Q96GA3 475 aaPredicted RBP26.71■■□□□ 1.87
PTBP1-215ENST00000589883 WASHC2AQ641Q2 1341 aa26.7■■□□□ 1.87
PTBP1-215ENST00000589883 ZBTB7AO95365 584 aa26.7■■□□□ 1.86
PTBP1-215ENST00000589883 MAP3K19Q56UN5 1328 aa26.68■■□□□ 1.86
PTBP1-215ENST00000589883 HOXC9P31274 260 aa26.67■■□□□ 1.86
PTBP1-215ENST00000589883 DDX54Q8TDD1 881 aaKnown RBP26.67■■□□□ 1.86
PTBP1-215ENST00000589883 MTFR1LQ9H019 292 aa26.67■■□□□ 1.86
PTBP1-215ENST00000589883 YY1P25490 414 aa26.66■■□□□ 1.86
PTBP1-215ENST00000589883 PDGFDQ9GZP0 370 aaPredicted RBP26.66■■□□□ 1.86
PTBP1-215ENST00000589883 BTAF1O14981 1849 aa26.65■■□□□ 1.86
PTBP1-215ENST00000589883 ATF5Q9Y2D1 282 aaPredicted RBP26.65■■□□□ 1.86
PTBP1-215ENST00000589883 RTL1A6NKG5 1358 aa26.64■■□□□ 1.86
PTBP1-215ENST00000589883 PTGER2P43116 358 aa26.62■■□□□ 1.85
PTBP1-215ENST00000589883 SLC27A3Q5K4L6 730 aa26.62■■□□□ 1.85
PTBP1-215ENST00000589883 PANK3Q9H999 370 aa26.62■■□□□ 1.85
PTBP1-215ENST00000589883 CARD14Q9BXL6 1004 aa26.61■■□□□ 1.85
PTBP1-215ENST00000589883 SMG6Q86US8 1419 aaKnown RBP26.6■■□□□ 1.85
PTBP1-215ENST00000589883 FYB1O15117 783 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms