RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
VAT1-206ENST00000589709 CDCA7Q9BWT1 371 aaPredicted RBP17.28■□□□□ 0.36
VAT1-206ENST00000589709 SLC12A5Q9H2X9 1139 aa17.28■□□□□ 0.36
VAT1-206ENST00000589709 CD163L1Q9NR16 1453 aa17.28■□□□□ 0.36
VAT1-206ENST00000589709 TNS1Q9HBL0 1735 aaKnown RBP17.27■□□□□ 0.36
VAT1-206ENST00000589709 TESK2Q96S53 571 aa17.27■□□□□ 0.36
VAT1-206ENST00000589709 CARD10Q9BWT7 1032 aa17.27■□□□□ 0.36
VAT1-206ENST00000589709 TERF2IPQ9NYB0 399 aa17.27■□□□□ 0.36
VAT1-206ENST00000589709 PARP4Q9UKK3 1724 aaKnown RBP17.27■□□□□ 0.35
VAT1-206ENST00000589709 DDB1Q16531 1140 aa17.26■□□□□ 0.35
VAT1-206ENST00000589709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
VAT1-206ENST00000589709 MON2Q7Z3U7 1717 aa17.26■□□□□ 0.35
VAT1-206ENST00000589709 NFAT5O94916 1531 aa17.26■□□□□ 0.35
VAT1-206ENST00000589709 ST20-MTHFSA0A0A6YYL1 179 aa17.25■□□□□ 0.35
VAT1-206ENST00000589709 PSDA5PKW4 1024 aaPredicted RBP17.25■□□□□ 0.35
VAT1-206ENST00000589709 SOX12O15370 315 aa17.25■□□□□ 0.35
VAT1-206ENST00000589709 NME9Q86XW9 330 aa17.25■□□□□ 0.35
VAT1-206ENST00000589709 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
VAT1-206ENST00000589709 ABCC6O95255 1503 aa17.24■□□□□ 0.35
VAT1-206ENST00000589709 CSB-PGBD3P0DP91 1061 aa17.23■□□□□ 0.35
VAT1-206ENST00000589709 NINLQ9Y2I6 1382 aa17.23■□□□□ 0.35
VAT1-206ENST00000589709 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
VAT1-206ENST00000589709 OVOS2A0A0J9YW53 1432 aa17.22■□□□□ 0.35
VAT1-206ENST00000589709 OVOS2Q6IE36 1432 aa17.22■□□□□ 0.35
VAT1-206ENST00000589709 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
VAT1-206ENST00000589709 USP54Q70EL1 1684 aa17.21■□□□□ 0.35
VAT1-206ENST00000589709 A0A1W2PP64 1363 aa17.21■□□□□ 0.35
VAT1-206ENST00000589709 CCDC7Q96M83 1385 aa17.21■□□□□ 0.35
VAT1-206ENST00000589709 BCL9O00512 1426 aa17.21■□□□□ 0.34
VAT1-206ENST00000589709 LRP5O75197 1615 aa17.2■□□□□ 0.34
VAT1-206ENST00000589709 PEAK1Q9H792 1746 aa17.19■□□□□ 0.34
VAT1-206ENST00000589709 PLSCR1O15162 318 aa17.19■□□□□ 0.34
VAT1-206ENST00000589709 MARCH10Q8NA82 808 aaPredicted RBP17.19■□□□□ 0.34
VAT1-206ENST00000589709 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
VAT1-206ENST00000589709 EXOC5O00471 708 aa17.18■□□□□ 0.34
VAT1-206ENST00000589709 NBPF14Q5TI25 921 aa17.18■□□□□ 0.34
VAT1-206ENST00000589709 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
VAT1-206ENST00000589709 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
VAT1-206ENST00000589709 ERBB3P21860 1342 aa17.18■□□□□ 0.34
VAT1-206ENST00000589709 RGPD5Q99666 1765 aa17.17■□□□□ 0.34
VAT1-206ENST00000589709 TMF1P82094 1093 aa17.15■□□□□ 0.34
VAT1-206ENST00000589709 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
VAT1-206ENST00000589709 RREB1Q92766 1687 aa17.15■□□□□ 0.34
VAT1-206ENST00000589709 USP47Q96K76 1375 aa17.15■□□□□ 0.34
VAT1-206ENST00000589709 WNK3Q9BYP7 1800 aa17.14■□□□□ 0.34
VAT1-206ENST00000589709 ANKRD24Q8TF21 1146 aa17.14■□□□□ 0.33
VAT1-206ENST00000589709 IP6K1Q92551 441 aa17.14■□□□□ 0.33
VAT1-206ENST00000589709 CLSPNQ9HAW4 1339 aa17.14■□□□□ 0.33
VAT1-206ENST00000589709 COG3Q96JB2 828 aa17.13■□□□□ 0.33
VAT1-206ENST00000589709 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
VAT1-206ENST00000589709 SBF2Q86WG5 1849 aa17.12■□□□□ 0.33
VAT1-206ENST00000589709 IL2RBP14784 551 aa17.12■□□□□ 0.33
VAT1-206ENST00000589709 CDCA8Q53HL2 280 aa17.12■□□□□ 0.33
VAT1-206ENST00000589709 PTF1AQ7RTS3 328 aa17.12■□□□□ 0.33
VAT1-206ENST00000589709 TNS2Q63HR2 1409 aa17.12■□□□□ 0.33
VAT1-206ENST00000589709 NUP188Q5SRE5 1749 aa17.11■□□□□ 0.33
VAT1-206ENST00000589709 RGPD3A6NKT7 1758 aaPredicted RBP17.1■□□□□ 0.33
VAT1-206ENST00000589709 LTN1O94822 1766 aa17.1■□□□□ 0.33
VAT1-206ENST00000589709 RGPD4Q7Z3J3 1758 aa17.1■□□□□ 0.33
VAT1-206ENST00000589709 PROM2Q8N271 834 aa17.09■□□□□ 0.33
VAT1-206ENST00000589709 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.32
VAT1-206ENST00000589709 FYB1O15117 783 aa17.08■□□□□ 0.32
VAT1-206ENST00000589709 HOXC9P31274 260 aa17.06■□□□□ 0.32
VAT1-206ENST00000589709 AMPHP49418 695 aa17.06■□□□□ 0.32
VAT1-206ENST00000589709 KCNQ2O43526 872 aa17.05■□□□□ 0.32
VAT1-206ENST00000589709 TXNRD1Q16881 649 aa17.05■□□□□ 0.32
VAT1-206ENST00000589709 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
VAT1-206ENST00000589709 FBLN1P23142 703 aa17.04■□□□□ 0.32
VAT1-206ENST00000589709 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
VAT1-206ENST00000589709 GGNBP2Q9H3C7 697 aa17.04■□□□□ 0.32
VAT1-206ENST00000589709 SPON1Q9HCB6 807 aa17.04■□□□□ 0.32
VAT1-206ENST00000589709 RTL1A6NKG5 1358 aa17.03■□□□□ 0.32
VAT1-206ENST00000589709 ANO8Q9HCE9 1232 aaPredicted RBP17.03■□□□□ 0.32
VAT1-206ENST00000589709 FAM208AQ9UK61 1670 aaKnown RBP17.01■□□□□ 0.31
VAT1-206ENST00000589709 ACSBG1Q96GR2 724 aa17.01■□□□□ 0.31
VAT1-206ENST00000589709 RRS1Q15050 365 aaKnown RBP17■□□□□ 0.31
VAT1-206ENST00000589709 CARD14Q9BXL6 1004 aa17■□□□□ 0.31
VAT1-206ENST00000589709 STK32BQ9NY57 414 aa17■□□□□ 0.31
VAT1-206ENST00000589709 NHSQ6T4R5 1651 aa17■□□□□ 0.31
VAT1-206ENST00000589709 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
VAT1-206ENST00000589709 SLC15A2Q16348 729 aa16.99■□□□□ 0.31
VAT1-206ENST00000589709 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
VAT1-206ENST00000589709 NBPF6Q5VWK0 638 aa16.98■□□□□ 0.31
VAT1-206ENST00000589709 NBPF4Q96M43 638 aa16.98■□□□□ 0.31
VAT1-206ENST00000589709 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
VAT1-206ENST00000589709 ZCRB1Q8TBF4 217 aaKnown RBP16.97■□□□□ 0.31
VAT1-206ENST00000589709 INSRP06213 1382 aa16.97■□□□□ 0.31
VAT1-206ENST00000589709 HSP90AB2PQ58FF8 381 aa16.96■□□□□ 0.31
VAT1-206ENST00000589709 PDGFDQ9GZP0 370 aaPredicted RBP16.96■□□□□ 0.31
VAT1-206ENST00000589709 PPP1R1BQ9UD71 204 aaPredicted RBP16.96■□□□□ 0.31
VAT1-206ENST00000589709 FLT4P35916 1363 aa16.95■□□□□ 0.3
VAT1-206ENST00000589709 SMG6Q86US8 1419 aaKnown RBP16.95■□□□□ 0.3
VAT1-206ENST00000589709 NSD3Q9BZ95 1437 aa16.95■□□□□ 0.3
VAT1-206ENST00000589709 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
VAT1-206ENST00000589709 MEGF6O75095 1541 aa16.94■□□□□ 0.3
VAT1-206ENST00000589709 PRIM1P49642 420 aaKnown RBP16.93■□□□□ 0.3
VAT1-206ENST00000589709 SLC27A3Q5K4L6 730 aa16.93■□□□□ 0.3
VAT1-206ENST00000589709 RAPGEF4Q8WZA2 1011 aa16.93■□□□□ 0.3
VAT1-206ENST00000589709 BTAF1O14981 1849 aa16.93■□□□□ 0.3
VAT1-206ENST00000589709 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms