RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 ALKQ9UM73 1620 aa8.57□□□□□ -1.04
LINC01539-202ENST00000589293 MINK1Q8N4C8 1332 aaPredicted RBP8.56□□□□□ -1.04
LINC01539-202ENST00000589293 ARHGAP33O14559 1287 aa8.56□□□□□ -1.04
LINC01539-202ENST00000589293 TRIM66O15016 1216 aa8.56□□□□□ -1.04
LINC01539-202ENST00000589293 MEX3CQ5U5Q3 659 aaKnown RBP8.56□□□□□ -1.04
LINC01539-202ENST00000589293 RBM27Q9P2N5 1060 aaKnown RBP8.56□□□□□ -1.04
LINC01539-202ENST00000589293 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
LINC01539-202ENST00000589293 KDM5AP29375 1690 aaKnown RBP8.56□□□□□ -1.04
LINC01539-202ENST00000589293 ADGRB3O60242 1522 aa8.55□□□□□ -1.04
LINC01539-202ENST00000589293 LMTK2Q8IWU2 1503 aa8.55□□□□□ -1.04
LINC01539-202ENST00000589293 POTEMA6NI47 508 aa8.55□□□□□ -1.04
LINC01539-202ENST00000589293 KRI1Q8N9T8 703 aaKnown RBP8.55□□□□□ -1.04
LINC01539-202ENST00000589293 AK7Q96M32 723 aa8.55□□□□□ -1.04
LINC01539-202ENST00000589293 SLAIN2Q9P270 581 aa8.55□□□□□ -1.04
LINC01539-202ENST00000589293 NKTRP30414 1462 aaKnown RBP8.55□□□□□ -1.04
LINC01539-202ENST00000589293 ANKRD50Q9ULJ7 1429 aa8.54□□□□□ -1.04
LINC01539-202ENST00000589293 RPRD2Q5VT52 1461 aaKnown RBP8.54□□□□□ -1.04
LINC01539-202ENST00000589293 ATF3P18847 181 aa8.54□□□□□ -1.04
LINC01539-202ENST00000589293 BRPF1P55201 1214 aaPredicted RBP8.54□□□□□ -1.04
LINC01539-202ENST00000589293 ROBO1Q9Y6N7 1651 aa8.53□□□□□ -1.04
LINC01539-202ENST00000589293 JCADQ9P266 1359 aa8.53□□□□□ -1.04
LINC01539-202ENST00000589293 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
LINC01539-202ENST00000589293 POTEGQ6S5H5 508 aa8.53□□□□□ -1.04
LINC01539-202ENST00000589293 KRTAP3-3Q9BYR6 98 aa8.53□□□□□ -1.04
LINC01539-202ENST00000589293 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
LINC01539-202ENST00000589293 NOS1P29475 1434 aa8.53□□□□□ -1.04
LINC01539-202ENST00000589293 RIMS2Q9UQ26 1411 aa8.53□□□□□ -1.04
LINC01539-202ENST00000589293 PLEKHG1Q9ULL1 1385 aa8.52□□□□□ -1.05
LINC01539-202ENST00000589293 PBX2P40425 430 aa8.52□□□□□ -1.05
LINC01539-202ENST00000589293 NLRP7Q8WX94 980 aa8.52□□□□□ -1.05
LINC01539-202ENST00000589293 PLSCR2Q9NRY7 297 aa8.52□□□□□ -1.05
LINC01539-202ENST00000589293 ADGRL2O95490 1459 aa8.51□□□□□ -1.05
LINC01539-202ENST00000589293 ZNF772Q68DY9 489 aaPredicted RBP8.51□□□□□ -1.05
LINC01539-202ENST00000589293 POTEAQ6S8J7 498 aa8.51□□□□□ -1.05
LINC01539-202ENST00000589293 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
LINC01539-202ENST00000589293 PXYLP1Q8TE99 480 aa8.51□□□□□ -1.05
LINC01539-202ENST00000589293 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
LINC01539-202ENST00000589293 RGS17Q9UGC6 210 aaPredicted RBP8.51□□□□□ -1.05
LINC01539-202ENST00000589293 TBX22Q9Y458 520 aa8.51□□□□□ -1.05
LINC01539-202ENST00000589293 XIRP1Q702N8 1843 aaKnown RBP8.51□□□□□ -1.05
LINC01539-202ENST00000589293 TET3O43151 1660 aa8.5□□□□□ -1.05
LINC01539-202ENST00000589293 PHLPP1O60346 1717 aa8.5□□□□□ -1.05
LINC01539-202ENST00000589293 ZNF326Q5BKZ1 582 aaKnown RBP8.5□□□□□ -1.05
LINC01539-202ENST00000589293 NUTM2DQ5VT03 806 aaPredicted RBP8.5□□□□□ -1.05
LINC01539-202ENST00000589293 EYA1Q99502 592 aa8.5□□□□□ -1.05
LINC01539-202ENST00000589293 SLC4A5Q9BY07 1137 aa8.5□□□□□ -1.05
LINC01539-202ENST00000589293 C19orf44Q9H6X5 657 aa8.5□□□□□ -1.05
LINC01539-202ENST00000589293 GPBP1L1Q9HC44 474 aaPredicted RBP8.5□□□□□ -1.05
LINC01539-202ENST00000589293 PCDH10Q9P2E7 1040 aa8.5□□□□□ -1.05
LINC01539-202ENST00000589293 VPS9D1Q9Y2B5 631 aa8.5□□□□□ -1.05
LINC01539-202ENST00000589293 NCOA3Q9Y6Q9 1424 aa8.5□□□□□ -1.05
LINC01539-202ENST00000589293 SPATA31A6Q5VVP1 1343 aa8.5□□□□□ -1.05
LINC01539-202ENST00000589293 NWD1Q149M9 1564 aa8.49□□□□□ -1.05
LINC01539-202ENST00000589293 SMAPO00193 183 aa8.49□□□□□ -1.05
LINC01539-202ENST00000589293 ITGAEP38570 1179 aa8.49□□□□□ -1.05
LINC01539-202ENST00000589293 PDE4DQ08499 809 aa8.49□□□□□ -1.05
LINC01539-202ENST00000589293 AMHR2Q16671 573 aa8.49□□□□□ -1.05
LINC01539-202ENST00000589293 PIK3R4Q99570 1358 aa8.48□□□□□ -1.05
LINC01539-202ENST00000589293 LSM11P83369 360 aaKnown RBP eCLIP8.48□□□□□ -1.05
LINC01539-202ENST00000589293 NUDT18Q6ZVK8 323 aa8.48□□□□□ -1.05
LINC01539-202ENST00000589293 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
LINC01539-202ENST00000589293 TMUB1Q9BVT8 246 aa8.48□□□□□ -1.05
LINC01539-202ENST00000589293 KIAA1468Q9P260 1216 aa8.48□□□□□ -1.05
LINC01539-202ENST00000589293 NUP155O75694 1391 aa8.48□□□□□ -1.05
LINC01539-202ENST00000589293 ZFYVE9O95405 1425 aa8.47□□□□□ -1.05
LINC01539-202ENST00000589293 GCC2Q8IWJ2 1684 aa8.47□□□□□ -1.05
LINC01539-202ENST00000589293 NUTM2BA6NNL0 878 aaPredicted RBP8.47□□□□□ -1.05
LINC01539-202ENST00000589293 NUTM2EB1AL46 878 aaPredicted RBP8.47□□□□□ -1.05
LINC01539-202ENST00000589293 BHMG1C9JSJ3 638 aaPredicted RBP8.47□□□□□ -1.05
LINC01539-202ENST00000589293 NUTM2AQ8IVF1 878 aaPredicted RBP8.47□□□□□ -1.05
LINC01539-202ENST00000589293 TATDN2Q93075 761 aa8.47□□□□□ -1.05
LINC01539-202ENST00000589293 AMOTL2Q9Y2J4 779 aa8.47□□□□□ -1.05
LINC01539-202ENST00000589293 DIP2AQ14689 1571 aa8.47□□□□□ -1.05
LINC01539-202ENST00000589293 HRO43593 1189 aa8.46□□□□□ -1.06
LINC01539-202ENST00000589293 ONECUT3O60422 494 aaPredicted RBP8.46□□□□□ -1.06
LINC01539-202ENST00000589293 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
LINC01539-202ENST00000589293 RABGEF1Q9UJ41 708 aa8.46□□□□□ -1.06
LINC01539-202ENST00000589293 TMEM131LA2VDJ0 1609 aa8.46□□□□□ -1.06
LINC01539-202ENST00000589293 CHD2O14647 1828 aaKnown RBP8.45□□□□□ -1.06
LINC01539-202ENST00000589293 TRPM2O94759 1503 aa8.45□□□□□ -1.06
LINC01539-202ENST00000589293 RXRBP28702 533 aa8.45□□□□□ -1.06
LINC01539-202ENST00000589293 ADGRD1Q6QNK2 874 aa8.45□□□□□ -1.06
LINC01539-202ENST00000589293 SEPT9Q9UHD8 586 aaPredicted RBP8.45□□□□□ -1.06
LINC01539-202ENST00000589293 PNMA3Q9UL41 463 aa8.45□□□□□ -1.06
LINC01539-202ENST00000589293 ROCK1Q13464 1354 aa8.45□□□□□ -1.06
LINC01539-202ENST00000589293 OATP04181 439 aa8.44□□□□□ -1.06
LINC01539-202ENST00000589293 NEUROD2Q15784 382 aa8.44□□□□□ -1.06
LINC01539-202ENST00000589293 LRRC59Q96AG4 307 aaKnown RBP8.44□□□□□ -1.06
LINC01539-202ENST00000589293 UNC13BO14795 1591 aa8.44□□□□□ -1.06
LINC01539-202ENST00000589293 MYO5BQ9ULV0 1848 aa8.43□□□□□ -1.06
LINC01539-202ENST00000589293 RCCD1A6NED2 376 aa8.43□□□□□ -1.06
LINC01539-202ENST00000589293 NBPF26B4DH59 902 aa8.43□□□□□ -1.06
LINC01539-202ENST00000589293 TK2O00142 265 aa8.43□□□□□ -1.06
LINC01539-202ENST00000589293 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
LINC01539-202ENST00000589293 PACS2Q86VP3 889 aa8.43□□□□□ -1.06
LINC01539-202ENST00000589293 BRINP3Q76B58 766 aa8.42□□□□□ -1.06
LINC01539-202ENST00000589293 CDAN1Q8IWY9 1227 aa8.42□□□□□ -1.06
LINC01539-202ENST00000589293 KDM4CQ9H3R0 1056 aa8.42□□□□□ -1.06
LINC01539-202ENST00000589293 DCCP43146 1447 aa8.42□□□□□ -1.06
LINC01539-202ENST00000589293 ADAMTS13Q76LX8 1427 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms