RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 OVOS2Q6IE36 1432 aa21.29■■□□□ 1
ERCC1-209ENST00000589214 MYOM1P52179 1685 aa21.28■■□□□ 1
ERCC1-209ENST00000589214 ARHGEF25Q86VW2 580 aa21.28■■□□□ 1
ERCC1-209ENST00000589214 CCDC125Q86Z20 511 aa21.28■■□□□ 1
ERCC1-209ENST00000589214 WNK3Q9BYP7 1800 aa21.27■■□□□ 1
ERCC1-209ENST00000589214 ANKRD36BQ8N2N9 1353 aa21.27■■□□□ 1
ERCC1-209ENST00000589214 FAM182BQ5T319 152 aa21.27■■□□□ 1
ERCC1-209ENST00000589214 TCP11L2Q8N4U5 519 aa21.27■■□□□ 1
ERCC1-209ENST00000589214 ABCC6O95255 1503 aa21.27■■□□□ 1
ERCC1-209ENST00000589214 BARGINQ6ZT62 677 aa21.26■□□□□ 0.99
ERCC1-209ENST00000589214 PARP4Q9UKK3 1724 aaKnown RBP21.26■□□□□ 0.99
ERCC1-209ENST00000589214 RGPD1P0DJD0 1748 aa21.25■□□□□ 0.99
ERCC1-209ENST00000589214 AXIN2Q9Y2T1 843 aa21.25■□□□□ 0.99
ERCC1-209ENST00000589214 SF3B2Q13435 895 aaKnown RBP21.24■□□□□ 0.99
ERCC1-209ENST00000589214 LRRC37A3O60309 1634 aa21.24■□□□□ 0.99
ERCC1-209ENST00000589214 WDR17Q8IZU2 1322 aa21.24■□□□□ 0.99
ERCC1-209ENST00000589214 CDCA8Q53HL2 280 aa21.23■□□□□ 0.99
ERCC1-209ENST00000589214 TOM1L2Q6ZVM7 507 aa21.23■□□□□ 0.99
ERCC1-209ENST00000589214 THRAP3Q9Y2W1 955 aaKnown RBP21.23■□□□□ 0.99
ERCC1-209ENST00000589214 TNS1Q9HBL0 1735 aaKnown RBP21.22■□□□□ 0.99
ERCC1-209ENST00000589214 KIF20BQ96Q89 1820 aa21.21■□□□□ 0.99
ERCC1-209ENST00000589214 CSB-PGBD3P0DP91 1061 aa21.21■□□□□ 0.99
ERCC1-209ENST00000589214 HSPA5P11021 654 aaKnown RBP21.21■□□□□ 0.99
ERCC1-209ENST00000589214 DEFB132Q7Z7B7 95 aa21.21■□□□□ 0.99
ERCC1-209ENST00000589214 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.98
ERCC1-209ENST00000589214 PDE3BQ13370 1112 aa21.19■□□□□ 0.98
ERCC1-209ENST00000589214 COG3Q96JB2 828 aa21.17■□□□□ 0.98
ERCC1-209ENST00000589214 ERBB3P21860 1342 aa21.15■□□□□ 0.98
ERCC1-209ENST00000589214 BAG6P46379 1132 aa21.15■□□□□ 0.98
ERCC1-209ENST00000589214 FAM196AQ6ZSG2 479 aa21.15■□□□□ 0.98
ERCC1-209ENST00000589214 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
ERCC1-209ENST00000589214 NSD3Q9BZ95 1437 aa21.14■□□□□ 0.98
ERCC1-209ENST00000589214 CARD10Q9BWT7 1032 aa21.14■□□□□ 0.97
ERCC1-209ENST00000589214 DISP2A7MBM2 1401 aa21.13■□□□□ 0.97
ERCC1-209ENST00000589214 CCDC7Q96M83 1385 aa21.13■□□□□ 0.97
ERCC1-209ENST00000589214 PEAK1Q9H792 1746 aa21.13■□□□□ 0.97
ERCC1-209ENST00000589214 GGNBP2Q9H3C7 697 aa21.13■□□□□ 0.97
ERCC1-209ENST00000589214 FAM208AQ9UK61 1670 aaKnown RBP21.12■□□□□ 0.97
ERCC1-209ENST00000589214 TRIM37O94972 964 aa21.12■□□□□ 0.97
ERCC1-209ENST00000589214 DDB1Q16531 1140 aa21.12■□□□□ 0.97
ERCC1-209ENST00000589214 ANKRD24Q8TF21 1146 aa21.12■□□□□ 0.97
ERCC1-209ENST00000589214 OVOS2A0A0G2JMS6 1433 aa21.12■□□□□ 0.97
ERCC1-209ENST00000589214 MAP3K19Q56UN5 1328 aa21.11■□□□□ 0.97
ERCC1-209ENST00000589214 FYB1O15117 783 aa21.11■□□□□ 0.97
ERCC1-209ENST00000589214 FBLN1P23142 703 aa21.1■□□□□ 0.97
ERCC1-209ENST00000589214 NLRP2Q9NX02 1062 aa21.1■□□□□ 0.97
ERCC1-209ENST00000589214 EN1Q05925 392 aaPredicted RBP21.09■□□□□ 0.97
ERCC1-209ENST00000589214 CDCA7Q9BWT1 371 aaPredicted RBP21.09■□□□□ 0.97
ERCC1-209ENST00000589214 CARD14Q9BXL6 1004 aa21.09■□□□□ 0.97
ERCC1-209ENST00000589214 TNS2Q63HR2 1409 aa21.08■□□□□ 0.97
ERCC1-209ENST00000589214 IP6K1Q92551 441 aa21.08■□□□□ 0.97
ERCC1-209ENST00000589214 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
ERCC1-209ENST00000589214 AMPHP49418 695 aa21.07■□□□□ 0.96
ERCC1-209ENST00000589214 LTV1Q96GA3 475 aaPredicted RBP21.07■□□□□ 0.96
ERCC1-209ENST00000589214 RTL1A6NKG5 1358 aa21.07■□□□□ 0.96
ERCC1-209ENST00000589214 SBF2Q86WG5 1849 aa21.06■□□□□ 0.96
ERCC1-209ENST00000589214 HOXC9P31274 260 aa21.06■□□□□ 0.96
ERCC1-209ENST00000589214 RRS1Q15050 365 aaKnown RBP21.06■□□□□ 0.96
ERCC1-209ENST00000589214 RGPD2P0DJD1 1756 aa21.05■□□□□ 0.96
ERCC1-209ENST00000589214 APBA3O96018 575 aa21.04■□□□□ 0.96
ERCC1-209ENST00000589214 RREB1Q92766 1687 aa21.04■□□□□ 0.96
ERCC1-209ENST00000589214 EZH2Q15910 746 aaKnown RBP21.03■□□□□ 0.96
ERCC1-209ENST00000589214 MARCH10Q8NA82 808 aaPredicted RBP21.03■□□□□ 0.96
ERCC1-209ENST00000589214 ANKRD26Q9UPS8 1709 aa21.03■□□□□ 0.96
ERCC1-209ENST00000589214 EXOC5O00471 708 aa21.01■□□□□ 0.95
ERCC1-209ENST00000589214 IL2RBP14784 551 aa21.01■□□□□ 0.95
ERCC1-209ENST00000589214 CGNL1Q0VF96 1302 aa21.01■□□□□ 0.95
ERCC1-209ENST00000589214 NUP188Q5SRE5 1749 aa21.01■□□□□ 0.95
ERCC1-209ENST00000589214 PARD3Q8TEW0 1356 aa20.99■□□□□ 0.95
ERCC1-209ENST00000589214 SMG6Q86US8 1419 aaKnown RBP20.99■□□□□ 0.95
ERCC1-209ENST00000589214 CAMKK2Q96RR4 588 aa20.99■□□□□ 0.95
ERCC1-209ENST00000589214 FLT4P35916 1363 aa20.98■□□□□ 0.95
ERCC1-209ENST00000589214 RGPD3A6NKT7 1758 aaPredicted RBP20.98■□□□□ 0.95
ERCC1-209ENST00000589214 RGPD4Q7Z3J3 1758 aa20.98■□□□□ 0.95
ERCC1-209ENST00000589214 BCL9O00512 1426 aa20.98■□□□□ 0.95
ERCC1-209ENST00000589214 NHSQ6T4R5 1651 aa20.97■□□□□ 0.95
ERCC1-209ENST00000589214 PSDA5PKW4 1024 aaPredicted RBP20.97■□□□□ 0.95
ERCC1-209ENST00000589214 EMILIN1Q9Y6C2 1016 aa20.96■□□□□ 0.95
ERCC1-209ENST00000589214 INSRP06213 1382 aa20.96■□□□□ 0.95
ERCC1-209ENST00000589214 MEGF6O75095 1541 aa20.95■□□□□ 0.94
ERCC1-209ENST00000589214 PTF1AQ7RTS3 328 aa20.95■□□□□ 0.94
ERCC1-209ENST00000589214 PANK3Q9H999 370 aa20.95■□□□□ 0.94
ERCC1-209ENST00000589214 KIF24Q5T7B8 1368 aa20.95■□□□□ 0.94
ERCC1-209ENST00000589214 HSP90AB2PQ58FF8 381 aa20.94■□□□□ 0.94
ERCC1-209ENST00000589214 SHANK3Q9BYB0 1731 aa20.94■□□□□ 0.94
ERCC1-209ENST00000589214 KIF7Q2M1P5 1343 aa20.94■□□□□ 0.94
ERCC1-209ENST00000589214 USHBP1Q8N6Y0 703 aa20.93■□□□□ 0.94
ERCC1-209ENST00000589214 BCL11BQ9C0K0 894 aaPredicted RBP20.93■□□□□ 0.94
ERCC1-209ENST00000589214 MAP2P11137 1827 aaKnown RBP20.92■□□□□ 0.94
ERCC1-209ENST00000589214 PPM1GO15355 546 aaPredicted RBP20.92■□□□□ 0.94
ERCC1-209ENST00000589214 R3HDM1Q15032 1099 aaKnown RBP20.91■□□□□ 0.94
ERCC1-209ENST00000589214 NBPF6Q5VWK0 638 aa20.91■□□□□ 0.94
ERCC1-209ENST00000589214 NBPF4Q96M43 638 aa20.91■□□□□ 0.94
ERCC1-209ENST00000589214 TNNT2P45379 298 aaPredicted RBP20.9■□□□□ 0.94
ERCC1-209ENST00000589214 ACSBG1Q96GR2 724 aa20.9■□□□□ 0.94
ERCC1-209ENST00000589214 DOT1LQ8TEK3 1739 aa20.9■□□□□ 0.94
ERCC1-209ENST00000589214 NSD2O96028 1365 aa20.89■□□□□ 0.93
ERCC1-209ENST00000589214 LRP5O75197 1615 aa20.89■□□□□ 0.93
ERCC1-209ENST00000589214 BTAF1O14981 1849 aa20.88■□□□□ 0.93
ERCC1-209ENST00000589214 KCNQ2O43526 872 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 433.7 ms