RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 MARF1Q9Y4F3 1742 aaKnown RBP11.71□□□□□ -0.54
KDM4B-207ENST00000588961 PHRF1Q9P1Y6 1649 aaKnown RBP11.71□□□□□ -0.54
KDM4B-207ENST00000588961 KIAA0232Q92628 1395 aa11.7□□□□□ -0.54
KDM4B-207ENST00000588961 NPC1L1Q9UHC9 1359 aa11.7□□□□□ -0.54
KDM4B-207ENST00000588961 MYBBP1AQ9BQG0 1328 aaKnown RBP11.7□□□□□ -0.54
KDM4B-207ENST00000588961 ZNF772Q68DY9 489 aaPredicted RBP11.7□□□□□ -0.54
KDM4B-207ENST00000588961 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
KDM4B-207ENST00000588961 GGNBP2Q9H3C7 697 aa11.7□□□□□ -0.54
KDM4B-207ENST00000588961 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
KDM4B-207ENST00000588961 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
KDM4B-207ENST00000588961 USP31Q70CQ4 1352 aa11.69□□□□□ -0.54
KDM4B-207ENST00000588961 FYB1O15117 783 aa11.69□□□□□ -0.54
KDM4B-207ENST00000588961 NEFLP07196 543 aa11.69□□□□□ -0.54
KDM4B-207ENST00000588961 MKRN4PQ13434 485 aaPredicted RBP11.69□□□□□ -0.54
KDM4B-207ENST00000588961 QTRT2Q9H974 415 aaKnown RBP11.69□□□□□ -0.54
KDM4B-207ENST00000588961 HNRNPUQ00839 825 aaKnown RBP eCLIP11.68□□□□□ -0.54
KDM4B-207ENST00000588961 ILDR2Q71H61 639 aa11.68□□□□□ -0.54
KDM4B-207ENST00000588961 KCNH5Q8NCM2 988 aa11.68□□□□□ -0.54
KDM4B-207ENST00000588961 COG3Q96JB2 828 aa11.68□□□□□ -0.54
KDM4B-207ENST00000588961 BTG4Q9NY30 223 aa11.68□□□□□ -0.54
KDM4B-207ENST00000588961 SUPT16HQ9Y5B9 1047 aaKnown RBP11.68□□□□□ -0.54
KDM4B-207ENST00000588961 SLIT3O75094 1523 aa11.68□□□□□ -0.54
KDM4B-207ENST00000588961 FBLN1P23142 703 aa11.67□□□□□ -0.54
KDM4B-207ENST00000588961 UNC5CLQ8IV45 518 aa11.67□□□□□ -0.54
KDM4B-207ENST00000588961 PNISRQ8TF01 805 aaKnown RBP11.67□□□□□ -0.54
KDM4B-207ENST00000588961 BCL9LQ86UU0 1499 aa11.67□□□□□ -0.54
KDM4B-207ENST00000588961 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
KDM4B-207ENST00000588961 SLIT2O94813 1529 aa11.66□□□□□ -0.54
KDM4B-207ENST00000588961 OVOS2A0A0J9YW53 1432 aa11.66□□□□□ -0.54
KDM4B-207ENST00000588961 OVOS2Q6IE36 1432 aa11.66□□□□□ -0.54
KDM4B-207ENST00000588961 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.54
KDM4B-207ENST00000588961 COL14A1Q05707 1796 aaKnown RBP11.65□□□□□ -0.54
KDM4B-207ENST00000588961 ARHGEF25Q86VW2 580 aa11.65□□□□□ -0.54
KDM4B-207ENST00000588961 STRN4Q9NRL3 753 aa11.65□□□□□ -0.54
KDM4B-207ENST00000588961 TRPC5Q9UL62 973 aaPredicted RBP11.65□□□□□ -0.54
KDM4B-207ENST00000588961 CCDC9Q9Y3X0 531 aaKnown RBP11.65□□□□□ -0.54
KDM4B-207ENST00000588961 CPDO75976 1380 aa11.65□□□□□ -0.55
KDM4B-207ENST00000588961 RXRBP28702 533 aa11.64□□□□□ -0.55
KDM4B-207ENST00000588961 EVA1CP58658 441 aa11.64□□□□□ -0.55
KDM4B-207ENST00000588961 PDE3BQ13370 1112 aa11.64□□□□□ -0.55
KDM4B-207ENST00000588961 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
KDM4B-207ENST00000588961 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
KDM4B-207ENST00000588961 NFAT5O94916 1531 aa11.64□□□□□ -0.55
KDM4B-207ENST00000588961 CGNL1Q0VF96 1302 aa11.63□□□□□ -0.55
KDM4B-207ENST00000588961 KIF20BQ96Q89 1820 aa11.63□□□□□ -0.55
KDM4B-207ENST00000588961 ATRNO75882 1429 aa11.63□□□□□ -0.55
KDM4B-207ENST00000588961 USP54Q70EL1 1684 aa11.63□□□□□ -0.55
KDM4B-207ENST00000588961 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
KDM4B-207ENST00000588961 KNSTRNQ9Y448 316 aa11.63□□□□□ -0.55
KDM4B-207ENST00000588961 CAMTA1Q9Y6Y1 1673 aa11.62□□□□□ -0.55
KDM4B-207ENST00000588961 TNNT2P45379 298 aaPredicted RBP11.62□□□□□ -0.55
KDM4B-207ENST00000588961 RBM6P78332 1123 aaKnown RBP11.62□□□□□ -0.55
KDM4B-207ENST00000588961 RRS1Q15050 365 aaKnown RBP11.62□□□□□ -0.55
KDM4B-207ENST00000588961 VPS72Q15906 364 aa11.62□□□□□ -0.55
KDM4B-207ENST00000588961 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
KDM4B-207ENST00000588961 NWD2Q9ULI1 1742 aa11.62□□□□□ -0.55
KDM4B-207ENST00000588961 AATKQ6ZMQ8 1374 aa11.62□□□□□ -0.55
KDM4B-207ENST00000588961 NRAPQ86VF7 1730 aa11.61□□□□□ -0.55
KDM4B-207ENST00000588961 CCDC184Q52MB2 194 aa11.61□□□□□ -0.55
KDM4B-207ENST00000588961 LARP1Q6PKG0 1096 aaKnown RBP11.61□□□□□ -0.55
KDM4B-207ENST00000588961 FAM9BQ8IZU0 186 aa11.61□□□□□ -0.55
KDM4B-207ENST00000588961 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
KDM4B-207ENST00000588961 COL18A1P39060 1754 aa11.6□□□□□ -0.55
KDM4B-207ENST00000588961 LMO7Q8WWI1 1683 aa11.6□□□□□ -0.55
KDM4B-207ENST00000588961 NGEFQ8N5V2 710 aa11.6□□□□□ -0.55
KDM4B-207ENST00000588961 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
KDM4B-207ENST00000588961 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
KDM4B-207ENST00000588961 AMPHP49418 695 aa11.59□□□□□ -0.55
KDM4B-207ENST00000588961 AMER1Q5JTC6 1135 aaPredicted RBP11.59□□□□□ -0.55
KDM4B-207ENST00000588961 CC2D1BQ5T0F9 858 aaKnown RBP11.59□□□□□ -0.55
KDM4B-207ENST00000588961 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
KDM4B-207ENST00000588961 SMG6Q86US8 1419 aaKnown RBP11.59□□□□□ -0.55
KDM4B-207ENST00000588961 LTN1O94822 1766 aa11.59□□□□□ -0.55
KDM4B-207ENST00000588961 RGPD5Q99666 1765 aa11.59□□□□□ -0.55
KDM4B-207ENST00000588961 GLI3P10071 1580 aa11.58□□□□□ -0.55
KDM4B-207ENST00000588961 COL5A2P05997 1499 aaPredicted RBP11.58□□□□□ -0.56
KDM4B-207ENST00000588961 CSB-PGBD3P0DP91 1061 aa11.58□□□□□ -0.56
KDM4B-207ENST00000588961 IP6K1Q92551 441 aa11.58□□□□□ -0.56
KDM4B-207ENST00000588961 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
KDM4B-207ENST00000588961 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
KDM4B-207ENST00000588961 SPATA31A5Q5VU36 1347 aa11.58□□□□□ -0.56
KDM4B-207ENST00000588961 SPATA31A7Q8IWB4 1347 aa11.58□□□□□ -0.56
KDM4B-207ENST00000588961 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
KDM4B-207ENST00000588961 HOXC9P31274 260 aa11.57□□□□□ -0.56
KDM4B-207ENST00000588961 FAM98CQ17RN3 349 aaKnown RBP11.57□□□□□ -0.56
KDM4B-207ENST00000588961 TOM1L2Q6ZVM7 507 aa11.57□□□□□ -0.56
KDM4B-207ENST00000588961 SPATA31A1Q5TZJ5 1347 aa11.57□□□□□ -0.56
KDM4B-207ENST00000588961 A0A0G2JS52 829 aa11.56□□□□□ -0.56
KDM4B-207ENST00000588961 RGS12O14924 1447 aa11.56□□□□□ -0.56
KDM4B-207ENST00000588961 MYT1Q01538 1121 aa11.56□□□□□ -0.56
KDM4B-207ENST00000588961 ANKRD24Q8TF21 1146 aa11.56□□□□□ -0.56
KDM4B-207ENST00000588961 WDR17Q8IZU2 1322 aa11.56□□□□□ -0.56
KDM4B-207ENST00000588961 NSD2O96028 1365 aa11.55□□□□□ -0.56
KDM4B-207ENST00000588961 ANKRD26Q9UPS8 1709 aa11.55□□□□□ -0.56
KDM4B-207ENST00000588961 FKBP8Q14318 412 aa11.55□□□□□ -0.56
KDM4B-207ENST00000588961 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
KDM4B-207ENST00000588961 SEPT12Q8IYM1 358 aa11.55□□□□□ -0.56
KDM4B-207ENST00000588961 POLKQ9UBT6 870 aa11.55□□□□□ -0.56
KDM4B-207ENST00000588961 NUDCQ9Y266 331 aa11.55□□□□□ -0.56
KDM4B-207ENST00000588961 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms