RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 TERF2IPQ9NYB0 399 aa27.07■■□□□ 1.92
CCDC130-209ENST00000588809 USP35Q9P2H5 1018 aa27.07■■□□□ 1.92
CCDC130-209ENST00000588809 PCGF6Q9BYE7 350 aa27.06■■□□□ 1.92
CCDC130-209ENST00000588809 LRRC37A3O60309 1634 aa27.05■■□□□ 1.92
CCDC130-209ENST00000588809 SF3B2Q13435 895 aaKnown RBP27.05■■□□□ 1.92
CCDC130-209ENST00000588809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.04■■□□□ 1.92
CCDC130-209ENST00000588809 AXIN2Q9Y2T1 843 aa27.03■■□□□ 1.92
CCDC130-209ENST00000588809 OVOS2A0A0J9YW53 1432 aa27.02■■□□□ 1.92
CCDC130-209ENST00000588809 OVOS2Q6IE36 1432 aa27.02■■□□□ 1.92
CCDC130-209ENST00000588809 ZBTB7CA1YPR0 619 aa27.02■■□□□ 1.92
CCDC130-209ENST00000588809 FAM182BQ5T319 152 aa27.02■■□□□ 1.92
CCDC130-209ENST00000588809 DEFB132Q7Z7B7 95 aa27.02■■□□□ 1.92
CCDC130-209ENST00000588809 NME9Q86XW9 330 aa27.02■■□□□ 1.92
CCDC130-209ENST00000588809 PEAK1Q9H792 1746 aa27.02■■□□□ 1.92
CCDC130-209ENST00000588809 WDR17Q8IZU2 1322 aa27.01■■□□□ 1.91
CCDC130-209ENST00000588809 ZRANB1Q9UGI0 708 aa27.01■■□□□ 1.91
CCDC130-209ENST00000588809 SBF2Q86WG5 1849 aa27.01■■□□□ 1.91
CCDC130-209ENST00000588809 DISP2A7MBM2 1401 aa27■■□□□ 1.91
CCDC130-209ENST00000588809 MYOM1P52179 1685 aa27■■□□□ 1.91
CCDC130-209ENST00000588809 SOX12O15370 315 aa26.98■■□□□ 1.91
CCDC130-209ENST00000588809 FAM196AQ6ZSG2 479 aa26.98■■□□□ 1.91
CCDC130-209ENST00000588809 ANKRD36BQ8N2N9 1353 aa26.97■■□□□ 1.91
CCDC130-209ENST00000588809 TMF1P82094 1093 aa26.97■■□□□ 1.91
CCDC130-209ENST00000588809 BAG6P46379 1132 aa26.96■■□□□ 1.91
CCDC130-209ENST00000588809 KIF20BQ96Q89 1820 aa26.95■■□□□ 1.91
CCDC130-209ENST00000588809 PDE3BQ13370 1112 aa26.95■■□□□ 1.9
CCDC130-209ENST00000588809 TOM1L2Q6ZVM7 507 aa26.95■■□□□ 1.9
CCDC130-209ENST00000588809 FAM208AQ9UK61 1670 aaKnown RBP26.95■■□□□ 1.9
CCDC130-209ENST00000588809 RREB1Q92766 1687 aa26.92■■□□□ 1.9
CCDC130-209ENST00000588809 CARD10Q9BWT7 1032 aa26.92■■□□□ 1.9
CCDC130-209ENST00000588809 RGPD3A6NKT7 1758 aaPredicted RBP26.9■■□□□ 1.9
CCDC130-209ENST00000588809 RGPD4Q7Z3J3 1758 aa26.9■■□□□ 1.9
CCDC130-209ENST00000588809 CDCA8Q53HL2 280 aa26.9■■□□□ 1.9
CCDC130-209ENST00000588809 CDCA7Q9BWT1 371 aaPredicted RBP26.89■■□□□ 1.9
CCDC130-209ENST00000588809 OVOS2A0A0G2JMS6 1433 aa26.89■■□□□ 1.89
CCDC130-209ENST00000588809 ERBB3P21860 1342 aa26.89■■□□□ 1.89
CCDC130-209ENST00000588809 CCDC7Q96M83 1385 aa26.88■■□□□ 1.89
CCDC130-209ENST00000588809 C11orf95C9JLR9 678 aaPredicted RBP26.88■■□□□ 1.89
CCDC130-209ENST00000588809 TRIM37O94972 964 aa26.88■■□□□ 1.89
CCDC130-209ENST00000588809 CSB-PGBD3P0DP91 1061 aa26.86■■□□□ 1.89
CCDC130-209ENST00000588809 EN1Q05925 392 aaPredicted RBP26.86■■□□□ 1.89
CCDC130-209ENST00000588809 DDB1Q16531 1140 aa26.86■■□□□ 1.89
CCDC130-209ENST00000588809 NUP188Q5SRE5 1749 aa26.86■■□□□ 1.89
CCDC130-209ENST00000588809 CCER1Q8TC90 406 aaPredicted RBP26.86■■□□□ 1.89
CCDC130-209ENST00000588809 PARD3Q8TEW0 1356 aa26.85■■□□□ 1.89
CCDC130-209ENST00000588809 BCL9O00512 1426 aa26.83■■□□□ 1.89
CCDC130-209ENST00000588809 COG3Q96JB2 828 aa26.83■■□□□ 1.89
CCDC130-209ENST00000588809 RGPD2P0DJD1 1756 aa26.83■■□□□ 1.89
CCDC130-209ENST00000588809 CAMKK2Q96RR4 588 aa26.81■■□□□ 1.88
CCDC130-209ENST00000588809 TNS2Q63HR2 1409 aa26.81■■□□□ 1.88
CCDC130-209ENST00000588809 LRP5O75197 1615 aa26.8■■□□□ 1.88
CCDC130-209ENST00000588809 IP6K1Q92551 441 aa26.8■■□□□ 1.88
CCDC130-209ENST00000588809 FYB1O15117 783 aa26.79■■□□□ 1.88
CCDC130-209ENST00000588809 APBA3O96018 575 aa26.79■■□□□ 1.88
CCDC130-209ENST00000588809 ANKRD24Q8TF21 1146 aa26.79■■□□□ 1.88
CCDC130-209ENST00000588809 EZH2Q15910 746 aaKnown RBP26.78■■□□□ 1.88
CCDC130-209ENST00000588809 MAP3K19Q56UN5 1328 aa26.77■■□□□ 1.88
CCDC130-209ENST00000588809 MARCH10Q8NA82 808 aaPredicted RBP26.77■■□□□ 1.88
CCDC130-209ENST00000588809 ANKRD26Q9UPS8 1709 aa26.76■■□□□ 1.87
CCDC130-209ENST00000588809 NHSQ6T4R5 1651 aa26.76■■□□□ 1.87
CCDC130-209ENST00000588809 RTL1A6NKG5 1358 aa26.75■■□□□ 1.87
CCDC130-209ENST00000588809 NLRP2Q9NX02 1062 aa26.75■■□□□ 1.87
CCDC130-209ENST00000588809 EXOC5O00471 708 aa26.73■■□□□ 1.87
CCDC130-209ENST00000588809 CARD14Q9BXL6 1004 aa26.73■■□□□ 1.87
CCDC130-209ENST00000588809 GGNBP2Q9H3C7 697 aa26.73■■□□□ 1.87
CCDC130-209ENST00000588809 NSD3Q9BZ95 1437 aa26.73■■□□□ 1.87
CCDC130-209ENST00000588809 HOXC9P31274 260 aa26.72■■□□□ 1.87
CCDC130-209ENST00000588809 KAT6BQ8WYB5 2073 aa26.72■■□□□ 1.87
CCDC130-209ENST00000588809 MAP2P11137 1827 aaKnown RBP26.72■■□□□ 1.87
CCDC130-209ENST00000588809 SHANK3Q9BYB0 1731 aa26.71■■□□□ 1.87
CCDC130-209ENST00000588809 IL2RBP14784 551 aa26.71■■□□□ 1.87
CCDC130-209ENST00000588809 FBLN1P23142 703 aa26.71■■□□□ 1.87
CCDC130-209ENST00000588809 EIF4G2P78344 907 aaKnown RBP eCLIP26.71■■□□□ 1.87
CCDC130-209ENST00000588809 BCL11BQ9C0K0 894 aaPredicted RBP26.7■■□□□ 1.86
CCDC130-209ENST00000588809 PSDA5PKW4 1024 aaPredicted RBP26.68■■□□□ 1.86
CCDC130-209ENST00000588809 AMPHP49418 695 aa26.68■■□□□ 1.86
CCDC130-209ENST00000588809 KIF24Q5T7B8 1368 aa26.68■■□□□ 1.86
CCDC130-209ENST00000588809 PLSCR1O15162 318 aa26.67■■□□□ 1.86
CCDC130-209ENST00000588809 HSPA5P11021 654 aaKnown RBP26.67■■□□□ 1.86
CCDC130-209ENST00000588809 BTAF1O14981 1849 aa26.67■■□□□ 1.86
CCDC130-209ENST00000588809 RRS1Q15050 365 aaKnown RBP26.65■■□□□ 1.86
CCDC130-209ENST00000588809 PTF1AQ7RTS3 328 aa26.65■■□□□ 1.86
CCDC130-209ENST00000588809 R3HDM1Q15032 1099 aaKnown RBP26.64■■□□□ 1.86
CCDC130-209ENST00000588809 LTV1Q96GA3 475 aaPredicted RBP26.64■■□□□ 1.86
CCDC130-209ENST00000588809 FLT4P35916 1363 aa26.62■■□□□ 1.85
CCDC130-209ENST00000588809 INSRP06213 1382 aa26.61■■□□□ 1.85
CCDC130-209ENST00000588809 SMG6Q86US8 1419 aaKnown RBP26.61■■□□□ 1.85
CCDC130-209ENST00000588809 CGNL1Q0VF96 1302 aa26.61■■□□□ 1.85
CCDC130-209ENST00000588809 DOT1LQ8TEK3 1739 aa26.59■■□□□ 1.85
CCDC130-209ENST00000588809 MEGF6O75095 1541 aa26.59■■□□□ 1.85
CCDC130-209ENST00000588809 NBPF14Q5TI25 921 aa26.57■■□□□ 1.84
CCDC130-209ENST00000588809 CASZ1Q86V15 1759 aa26.56■■□□□ 1.84
CCDC130-209ENST00000588809 KCNQ2O43526 872 aa26.55■■□□□ 1.84
CCDC130-209ENST00000588809 HSP90AB2PQ58FF8 381 aa26.55■■□□□ 1.84
CCDC130-209ENST00000588809 NBPF6Q5VWK0 638 aa26.55■■□□□ 1.84
CCDC130-209ENST00000588809 NBPF4Q96M43 638 aa26.55■■□□□ 1.84
CCDC130-209ENST00000588809 PKD1L3Q7Z443 1732 aa26.54■■□□□ 1.84
CCDC130-209ENST00000588809 PROM2Q8N271 834 aa26.54■■□□□ 1.84
CCDC130-209ENST00000588809 POLR3GLQ9BT43 218 aa26.54■■□□□ 1.84
CCDC130-209ENST00000588809 PAPPAQ13219 1627 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms