RNA–Protein interactions for RNA: ENST00000588564.1

RUNDC3A-204, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-204ENST00000588564 TNNT2P45379 298 aaPredicted RBP18.9■□□□□ 0.62
RUNDC3A-204ENST00000588564 USP21Q9UK80 565 aa18.9■□□□□ 0.62
RUNDC3A-204ENST00000588564 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
RUNDC3A-204ENST00000588564 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
RUNDC3A-204ENST00000588564 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
RUNDC3A-204ENST00000588564 ABCC6O95255 1503 aa18.88■□□□□ 0.61
RUNDC3A-204ENST00000588564 ZNF772Q68DY9 489 aaPredicted RBP18.87■□□□□ 0.61
RUNDC3A-204ENST00000588564 IP6K1Q92551 441 aa18.87■□□□□ 0.61
RUNDC3A-204ENST00000588564 EMILIN1Q9Y6C2 1016 aa18.87■□□□□ 0.61
RUNDC3A-204ENST00000588564 HOXC9P31274 260 aa18.86■□□□□ 0.61
RUNDC3A-204ENST00000588564 POTEAQ6S8J7 498 aa18.86■□□□□ 0.61
RUNDC3A-204ENST00000588564 COL5A2P05997 1499 aaPredicted RBP18.85■□□□□ 0.61
RUNDC3A-204ENST00000588564 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
RUNDC3A-204ENST00000588564 ATRNO75882 1429 aa18.84■□□□□ 0.61
RUNDC3A-204ENST00000588564 AMPHP49418 695 aa18.84■□□□□ 0.61
RUNDC3A-204ENST00000588564 STRN4Q9NRL3 753 aa18.83■□□□□ 0.6
RUNDC3A-204ENST00000588564 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.6
RUNDC3A-204ENST00000588564 BLMP54132 1417 aaPredicted RBP18.83■□□□□ 0.6
RUNDC3A-204ENST00000588564 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
RUNDC3A-204ENST00000588564 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
RUNDC3A-204ENST00000588564 KIF24Q5T7B8 1368 aa18.82■□□□□ 0.6
RUNDC3A-204ENST00000588564 EVA1CP58658 441 aa18.82■□□□□ 0.6
RUNDC3A-204ENST00000588564 VPS72Q15906 364 aa18.82■□□□□ 0.6
RUNDC3A-204ENST00000588564 HSP90AB2PQ58FF8 381 aa18.82■□□□□ 0.6
RUNDC3A-204ENST00000588564 LARP1Q6PKG0 1096 aaKnown RBP18.82■□□□□ 0.6
RUNDC3A-204ENST00000588564 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
RUNDC3A-204ENST00000588564 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
RUNDC3A-204ENST00000588564 RGPD2P0DJD1 1756 aa18.81■□□□□ 0.6
RUNDC3A-204ENST00000588564 FLT4P35916 1363 aa18.81■□□□□ 0.6
RUNDC3A-204ENST00000588564 ANKRD24Q8TF21 1146 aa18.8■□□□□ 0.6
RUNDC3A-204ENST00000588564 GLI3P10071 1580 aa18.8■□□□□ 0.6
RUNDC3A-204ENST00000588564 INSRP06213 1382 aa18.8■□□□□ 0.6
RUNDC3A-204ENST00000588564 ERBB3P21860 1342 aa18.79■□□□□ 0.6
RUNDC3A-204ENST00000588564 WDR17Q8IZU2 1322 aa18.79■□□□□ 0.6
RUNDC3A-204ENST00000588564 PPP2R1AP30153 589 aa18.79■□□□□ 0.6
RUNDC3A-204ENST00000588564 MTHFSP49914 203 aa18.79■□□□□ 0.6
RUNDC3A-204ENST00000588564 GJD4Q96KN9 370 aaPredicted RBP18.79■□□□□ 0.6
RUNDC3A-204ENST00000588564 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
RUNDC3A-204ENST00000588564 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
RUNDC3A-204ENST00000588564 LTV1Q96GA3 475 aaPredicted RBP18.78■□□□□ 0.6
RUNDC3A-204ENST00000588564 SPATA31A1Q5TZJ5 1347 aa18.77■□□□□ 0.6
RUNDC3A-204ENST00000588564 CRB1P82279 1406 aa18.76■□□□□ 0.59
RUNDC3A-204ENST00000588564 CCDC9Q9Y3X0 531 aaKnown RBP18.76■□□□□ 0.59
RUNDC3A-204ENST00000588564 CDK12Q9NYV4 1490 aaPredicted RBP18.76■□□□□ 0.59
RUNDC3A-204ENST00000588564 FAM208AQ9UK61 1670 aaKnown RBP18.76■□□□□ 0.59
RUNDC3A-204ENST00000588564 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
RUNDC3A-204ENST00000588564 RXRBP28702 533 aa18.75■□□□□ 0.59
RUNDC3A-204ENST00000588564 RBM6P78332 1123 aaKnown RBP18.75■□□□□ 0.59
RUNDC3A-204ENST00000588564 RALBP1Q15311 655 aa18.75■□□□□ 0.59
RUNDC3A-204ENST00000588564 TOM1L2Q6ZVM7 507 aa18.75■□□□□ 0.59
RUNDC3A-204ENST00000588564 PRKRIP1Q9H875 184 aaPredicted RBP18.75■□□□□ 0.59
RUNDC3A-204ENST00000588564 CARD10Q9BWT7 1032 aa18.74■□□□□ 0.59
RUNDC3A-204ENST00000588564 EIF4A2Q14240 407 aaKnown RBP18.73■□□□□ 0.59
RUNDC3A-204ENST00000588564 NBPF6Q5VWK0 638 aa18.73■□□□□ 0.59
RUNDC3A-204ENST00000588564 NBPF4Q96M43 638 aa18.73■□□□□ 0.59
RUNDC3A-204ENST00000588564 USP35Q9P2H5 1018 aa18.73■□□□□ 0.59
RUNDC3A-204ENST00000588564 ONECUT3O60422 494 aaPredicted RBP18.72■□□□□ 0.59
RUNDC3A-204ENST00000588564 NLRP2Q9NX02 1062 aa18.72■□□□□ 0.59
RUNDC3A-204ENST00000588564 WNK3Q9BYP7 1800 aa18.72■□□□□ 0.59
RUNDC3A-204ENST00000588564 COL3A1P02461 1466 aaPredicted RBP18.71■□□□□ 0.59
RUNDC3A-204ENST00000588564 IL13P35225 146 aa18.71■□□□□ 0.59
RUNDC3A-204ENST00000588564 TCP11L2Q8N4U5 519 aa18.71■□□□□ 0.59
RUNDC3A-204ENST00000588564 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
RUNDC3A-204ENST00000588564 BARGINQ6ZT62 677 aa18.7■□□□□ 0.58
RUNDC3A-204ENST00000588564 EYA1Q99502 592 aa18.7■□□□□ 0.58
RUNDC3A-204ENST00000588564 THRAP3Q9Y2W1 955 aaKnown RBP18.7■□□□□ 0.58
RUNDC3A-204ENST00000588564 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
RUNDC3A-204ENST00000588564 THSD7AQ9UPZ6 1657 aa18.69■□□□□ 0.58
RUNDC3A-204ENST00000588564 MYBBP1AQ9BQG0 1328 aaKnown RBP18.69■□□□□ 0.58
RUNDC3A-204ENST00000588564 BRWD3Q6RI45 1802 aa18.68■□□□□ 0.58
RUNDC3A-204ENST00000588564 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
RUNDC3A-204ENST00000588564 RGS12O14924 1447 aa18.67■□□□□ 0.58
RUNDC3A-204ENST00000588564 NCAPD2Q15021 1401 aa18.67■□□□□ 0.58
RUNDC3A-204ENST00000588564 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
RUNDC3A-204ENST00000588564 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
RUNDC3A-204ENST00000588564 ILDR2Q71H61 639 aa18.66■□□□□ 0.58
RUNDC3A-204ENST00000588564 ANP32CO43423 234 aa18.65■□□□□ 0.58
RUNDC3A-204ENST00000588564 SEPT12Q8IYM1 358 aa18.65■□□□□ 0.58
RUNDC3A-204ENST00000588564 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
RUNDC3A-204ENST00000588564 PARP4Q9UKK3 1724 aaKnown RBP18.65■□□□□ 0.58
RUNDC3A-204ENST00000588564 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
RUNDC3A-204ENST00000588564 IL2RBP14784 551 aa18.62■□□□□ 0.57
RUNDC3A-204ENST00000588564 LRRC37A3O60309 1634 aa18.62■□□□□ 0.57
RUNDC3A-204ENST00000588564 MEGF6O75095 1541 aa18.61■□□□□ 0.57
RUNDC3A-204ENST00000588564 CCDC184Q52MB2 194 aa18.6■□□□□ 0.57
RUNDC3A-204ENST00000588564 AEBP1Q8IUX7 1158 aa18.6■□□□□ 0.57
RUNDC3A-204ENST00000588564 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
RUNDC3A-204ENST00000588564 A0A0G2JS52 829 aa18.59■□□□□ 0.57
RUNDC3A-204ENST00000588564 MYT1Q01538 1121 aa18.59■□□□□ 0.57
RUNDC3A-204ENST00000588564 SULT6B1Q6IMI4 303 aa18.59■□□□□ 0.57
RUNDC3A-204ENST00000588564 SHANK3Q9BYB0 1731 aa18.59■□□□□ 0.57
RUNDC3A-204ENST00000588564 KDRP35968 1356 aa18.58■□□□□ 0.57
RUNDC3A-204ENST00000588564 U2SURPO15042 1029 aaKnown RBP18.58■□□□□ 0.56
RUNDC3A-204ENST00000588564 DIEXFQ68CQ4 756 aaKnown RBP18.58■□□□□ 0.56
RUNDC3A-204ENST00000588564 EXOC5O00471 708 aa18.57■□□□□ 0.56
RUNDC3A-204ENST00000588564 HMOX1P09601 288 aa18.57■□□□□ 0.56
RUNDC3A-204ENST00000588564 DDB1Q16531 1140 aa18.57■□□□□ 0.56
RUNDC3A-204ENST00000588564 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
RUNDC3A-204ENST00000588564 OVOS2A0A0G2JMS6 1433 aa18.57■□□□□ 0.56
RUNDC3A-204ENST00000588564 TATP17735 454 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms