RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 AXIN2Q9Y2T1 843 aa23.99■■□□□ 1.43
LINC01842-201ENST00000588275 RGPD5Q99666 1765 aa23.98■■□□□ 1.43
LINC01842-201ENST00000588275 CSB-PGBD3P0DP91 1061 aa23.98■■□□□ 1.43
LINC01842-201ENST00000588275 KCNH5Q8NCM2 988 aa23.98■■□□□ 1.43
LINC01842-201ENST00000588275 WDR17Q8IZU2 1322 aa23.98■■□□□ 1.43
LINC01842-201ENST00000588275 KTN1Q86UP2 1357 aaKnown RBP23.98■■□□□ 1.43
LINC01842-201ENST00000588275 TTC21AQ8NDW8 1320 aa23.97■■□□□ 1.43
LINC01842-201ENST00000588275 PEAK1Q9H792 1746 aa23.97■■□□□ 1.43
LINC01842-201ENST00000588275 C11orf95C9JLR9 678 aaPredicted RBP23.96■■□□□ 1.43
LINC01842-201ENST00000588275 ARHGEF25Q86VW2 580 aa23.95■■□□□ 1.42
LINC01842-201ENST00000588275 SBF2Q86WG5 1849 aa23.94■■□□□ 1.42
LINC01842-201ENST00000588275 MON2Q7Z3U7 1717 aa23.94■■□□□ 1.42
LINC01842-201ENST00000588275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.93■■□□□ 1.42
LINC01842-201ENST00000588275 CARD11Q9BXL7 1154 aa23.92■■□□□ 1.42
LINC01842-201ENST00000588275 NFAT5O94916 1531 aa23.92■■□□□ 1.42
LINC01842-201ENST00000588275 TMC1Q8TDI8 760 aa23.9■■□□□ 1.42
LINC01842-201ENST00000588275 CDCA7Q9BWT1 371 aaPredicted RBP23.9■■□□□ 1.42
LINC01842-201ENST00000588275 CARD10Q9BWT7 1032 aa23.89■■□□□ 1.41
LINC01842-201ENST00000588275 RGPD3A6NKT7 1758 aaPredicted RBP23.88■■□□□ 1.41
LINC01842-201ENST00000588275 RGPD4Q7Z3J3 1758 aa23.88■■□□□ 1.41
LINC01842-201ENST00000588275 PTF1AQ7RTS3 328 aa23.88■■□□□ 1.41
LINC01842-201ENST00000588275 MARCH10Q8NA82 808 aaPredicted RBP23.88■■□□□ 1.41
LINC01842-201ENST00000588275 SBNO2Q9Y2G9 1366 aa23.88■■□□□ 1.41
LINC01842-201ENST00000588275 TONSLQ96HA7 1378 aa23.87■■□□□ 1.41
LINC01842-201ENST00000588275 NME9Q86XW9 330 aa23.86■■□□□ 1.41
LINC01842-201ENST00000588275 BCL11BQ9C0K0 894 aaPredicted RBP23.86■■□□□ 1.41
LINC01842-201ENST00000588275 PPP1R1BQ9UD71 204 aaPredicted RBP23.85■■□□□ 1.41
LINC01842-201ENST00000588275 LTN1O94822 1766 aa23.84■■□□□ 1.41
LINC01842-201ENST00000588275 CD163L1Q9NR16 1453 aa23.84■■□□□ 1.41
LINC01842-201ENST00000588275 CCDC7Q96M83 1385 aa23.84■■□□□ 1.41
LINC01842-201ENST00000588275 PLSCR1O15162 318 aa23.84■■□□□ 1.41
LINC01842-201ENST00000588275 HDGFL2Q7Z4V5 671 aaPredicted RBP23.84■■□□□ 1.41
LINC01842-201ENST00000588275 ABCC6O95255 1503 aa23.84■■□□□ 1.41
LINC01842-201ENST00000588275 EXOC5O00471 708 aa23.83■■□□□ 1.41
LINC01842-201ENST00000588275 SPON1Q9HCB6 807 aa23.83■■□□□ 1.41
LINC01842-201ENST00000588275 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
LINC01842-201ENST00000588275 ANO8Q9HCE9 1232 aaPredicted RBP23.82■■□□□ 1.4
LINC01842-201ENST00000588275 USP54Q70EL1 1684 aa23.82■■□□□ 1.4
LINC01842-201ENST00000588275 KCNQ2O43526 872 aa23.81■■□□□ 1.4
LINC01842-201ENST00000588275 SLC12A5Q9H2X9 1139 aa23.81■■□□□ 1.4
LINC01842-201ENST00000588275 NLRP2Q9NX02 1062 aa23.81■■□□□ 1.4
LINC01842-201ENST00000588275 TNS2Q63HR2 1409 aa23.81■■□□□ 1.4
LINC01842-201ENST00000588275 BCL9O00512 1426 aa23.79■■□□□ 1.4
LINC01842-201ENST00000588275 ERBB3P21860 1342 aa23.79■■□□□ 1.4
LINC01842-201ENST00000588275 EDC4Q6P2E9 1401 aaKnown RBP23.78■■□□□ 1.4
LINC01842-201ENST00000588275 TERF2IPQ9NYB0 399 aa23.78■■□□□ 1.4
LINC01842-201ENST00000588275 A0A1W2PP64 1363 aa23.78■■□□□ 1.4
LINC01842-201ENST00000588275 PROM2Q8N271 834 aa23.76■■□□□ 1.39
LINC01842-201ENST00000588275 ACSBG1Q96GR2 724 aa23.76■■□□□ 1.39
LINC01842-201ENST00000588275 CASZ1Q86V15 1759 aa23.75■■□□□ 1.39
LINC01842-201ENST00000588275 ANKRD24Q8TF21 1146 aa23.75■■□□□ 1.39
LINC01842-201ENST00000588275 NHSQ6T4R5 1651 aa23.74■■□□□ 1.39
LINC01842-201ENST00000588275 TXNRD1Q16881 649 aa23.74■■□□□ 1.39
LINC01842-201ENST00000588275 IL2RBP14784 551 aa23.73■■□□□ 1.39
LINC01842-201ENST00000588275 PDGFDQ9GZP0 370 aaPredicted RBP23.73■■□□□ 1.39
LINC01842-201ENST00000588275 STK32BQ9NY57 414 aa23.73■■□□□ 1.39
LINC01842-201ENST00000588275 ZBTB7AO95365 584 aa23.72■■□□□ 1.39
LINC01842-201ENST00000588275 NINLQ9Y2I6 1382 aa23.7■■□□□ 1.38
LINC01842-201ENST00000588275 LTV1Q96GA3 475 aaPredicted RBP23.7■■□□□ 1.38
LINC01842-201ENST00000588275 KAT6BQ8WYB5 2073 aa23.7■■□□□ 1.38
LINC01842-201ENST00000588275 ST20-MTHFSA0A0A6YYL1 179 aa23.69■■□□□ 1.38
LINC01842-201ENST00000588275 DCAF8L1A6NGE4 600 aa23.69■■□□□ 1.38
LINC01842-201ENST00000588275 SLC15A2Q16348 729 aa23.67■■□□□ 1.38
LINC01842-201ENST00000588275 PUS7Q96PZ0 661 aaKnown RBP23.67■■□□□ 1.38
LINC01842-201ENST00000588275 ATF5Q9Y2D1 282 aaPredicted RBP23.67■■□□□ 1.38
LINC01842-201ENST00000588275 BTAF1O14981 1849 aa23.66■■□□□ 1.38
LINC01842-201ENST00000588275 YY1P25490 414 aa23.66■■□□□ 1.38
LINC01842-201ENST00000588275 MYOM1P52179 1685 aa23.66■■□□□ 1.38
LINC01842-201ENST00000588275 FAM208AQ9UK61 1670 aaKnown RBP23.65■■□□□ 1.38
LINC01842-201ENST00000588275 IP6K1Q92551 441 aa23.65■■□□□ 1.38
LINC01842-201ENST00000588275 COG3Q96JB2 828 aa23.65■■□□□ 1.38
LINC01842-201ENST00000588275 TESK2Q96S53 571 aa23.65■■□□□ 1.38
LINC01842-201ENST00000588275 DDX54Q8TDD1 881 aaKnown RBP23.62■■□□□ 1.37
LINC01842-201ENST00000588275 FBLN1P23142 703 aa23.61■■□□□ 1.37
LINC01842-201ENST00000588275 AMPHP49418 695 aa23.61■■□□□ 1.37
LINC01842-201ENST00000588275 MAP3K19Q56UN5 1328 aa23.6■■□□□ 1.37
LINC01842-201ENST00000588275 PTGER2P43116 358 aa23.6■■□□□ 1.37
LINC01842-201ENST00000588275 HOXC9P31274 260 aa23.59■■□□□ 1.37
LINC01842-201ENST00000588275 PAPPAQ13219 1627 aa23.59■■□□□ 1.37
LINC01842-201ENST00000588275 RGPD2P0DJD1 1756 aa23.58■■□□□ 1.37
LINC01842-201ENST00000588275 ANKRD36BQ8N2N9 1353 aa23.58■■□□□ 1.37
LINC01842-201ENST00000588275 SLC24A1O60721 1099 aa23.58■■□□□ 1.37
LINC01842-201ENST00000588275 MTFR1LQ9H019 292 aa23.58■■□□□ 1.37
LINC01842-201ENST00000588275 SYTL4Q96C24 671 aaPredicted RBP23.57■■□□□ 1.36
LINC01842-201ENST00000588275 USP47Q96K76 1375 aa23.55■■□□□ 1.36
LINC01842-201ENST00000588275 TMF1P82094 1093 aa23.55■■□□□ 1.36
LINC01842-201ENST00000588275 ZNF827Q17R98 1081 aa23.55■■□□□ 1.36
LINC01842-201ENST00000588275 DOT1LQ8TEK3 1739 aa23.55■■□□□ 1.36
LINC01842-201ENST00000588275 RRS1Q15050 365 aaKnown RBP23.54■■□□□ 1.36
LINC01842-201ENST00000588275 FHDC1Q9C0D6 1143 aaPredicted RBP23.54■■□□□ 1.36
LINC01842-201ENST00000588275 GGNBP2Q9H3C7 697 aa23.54■■□□□ 1.36
LINC01842-201ENST00000588275 LRRC4BQ9NT99 713 aa23.54■■□□□ 1.36
LINC01842-201ENST00000588275 MEGF6O75095 1541 aa23.52■■□□□ 1.36
LINC01842-201ENST00000588275 RTL1A6NKG5 1358 aa23.52■■□□□ 1.36
LINC01842-201ENST00000588275 SHANK3Q9BYB0 1731 aa23.51■■□□□ 1.35
LINC01842-201ENST00000588275 KIF20BQ96Q89 1820 aa23.5■■□□□ 1.35
LINC01842-201ENST00000588275 PRIM1P49642 420 aaKnown RBP23.5■■□□□ 1.35
LINC01842-201ENST00000588275 TRIM26Q12899 539 aaPredicted RBP23.5■■□□□ 1.35
LINC01842-201ENST00000588275 USHBP1Q8N6Y0 703 aa23.5■■□□□ 1.35
LINC01842-201ENST00000588275 ZCRB1Q8TBF4 217 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms