RNA–Protein interactions for RNA: ENST00000587361.1

YIF1B-208, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, human

TSL 3

Gene YIF1B, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YIF1B-208	ENST00000587361	EDC4	Q6P2E9	1401 aa	Known RBP	32.31	■■■□□ 2.76
YIF1B-208	ENST00000587361	NINL	Q9Y2I6	1382 aa		32.31	■■■□□ 2.76
YIF1B-208	ENST00000587361	SOX12	O15370	315 aa		32.29	■■■□□ 2.76
YIF1B-208	ENST00000587361	AXIN2	Q9Y2T1	843 aa		32.29	■■■□□ 2.76
YIF1B-208	ENST00000587361	ABCC6	O95255	1503 aa		32.29	■■■□□ 2.76
YIF1B-208	ENST00000587361	RGPD5	Q99666	1765 aa		32.29	■■■□□ 2.76
YIF1B-208	ENST00000587361	WDR17	Q8IZU2	1322 aa		32.28	■■■□□ 2.76
YIF1B-208	ENST00000587361	CLSPN	Q9HAW4	1339 aa		32.28	■■■□□ 2.76
YIF1B-208	ENST00000587361	DISP2	A7MBM2	1401 aa		32.28	■■■□□ 2.76
YIF1B-208	ENST00000587361		A0A1W2PP64	1363 aa		32.28	■■■□□ 2.76
YIF1B-208	ENST00000587361	TOM1L2	Q6ZVM7	507 aa		32.27	■■■□□ 2.76
YIF1B-208	ENST00000587361	NME9	Q86XW9	330 aa		32.26	■■■□□ 2.75
YIF1B-208	ENST00000587361	TIMELESS	Q9UNS1	1208 aa		32.26	■■■□□ 2.75
YIF1B-208	ENST00000587361	USP47	Q96K76	1375 aa		32.25	■■■□□ 2.75
YIF1B-208	ENST00000587361	WNK3	Q9BYP7	1800 aa		32.23	■■■□□ 2.75
YIF1B-208	ENST00000587361	TRIM37	O94972	964 aa		32.22	■■■□□ 2.75
YIF1B-208	ENST00000587361	EN1	Q05925	392 aa	Predicted RBP	32.22	■■■□□ 2.75
YIF1B-208	ENST00000587361	LRRC37A3	O60309	1634 aa		32.21	■■■□□ 2.75
YIF1B-208	ENST00000587361	C11orf95	C9JLR9	678 aa	Predicted RBP	32.2	■■■□□ 2.75
YIF1B-208	ENST00000587361	PCGF6	Q9BYE7	350 aa		32.2	■■■□□ 2.75
YIF1B-208	ENST00000587361	LTN1	O94822	1766 aa		32.19	■■■□□ 2.74
YIF1B-208	ENST00000587361	CSB-PGBD3	P0DP91	1061 aa		32.18	■■■□□ 2.74
YIF1B-208	ENST00000587361	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.18	■■■□□ 2.74
YIF1B-208	ENST00000587361	OVOS2	A0A0J9YW53	1432 aa		32.17	■■■□□ 2.74
YIF1B-208	ENST00000587361	OVOS2	Q6IE36	1432 aa		32.17	■■■□□ 2.74
YIF1B-208	ENST00000587361	TMF1	P82094	1093 aa		32.17	■■■□□ 2.74
YIF1B-208	ENST00000587361	CARD10	Q9BWT7	1032 aa		32.17	■■■□□ 2.74
YIF1B-208	ENST00000587361	DDB1	Q16531	1140 aa		32.16	■■■□□ 2.74
YIF1B-208	ENST00000587361	SRCAP	Q6ZRS2	3230 aa		32.15	■■■□□ 2.74
YIF1B-208	ENST00000587361	OVOS2	A0A0G2JMS6	1433 aa		32.15	■■■□□ 2.74
YIF1B-208	ENST00000587361	PEAK1	Q9H792	1746 aa		32.14	■■■□□ 2.74
YIF1B-208	ENST00000587361	PARD3	Q8TEW0	1356 aa		32.14	■■■□□ 2.74
YIF1B-208	ENST00000587361	APBA3	O96018	575 aa		32.13	■■■□□ 2.73
YIF1B-208	ENST00000587361	ANKRD36B	Q8N2N9	1353 aa		32.13	■■■□□ 2.73
YIF1B-208	ENST00000587361	CCDC7	Q96M83	1385 aa		32.13	■■■□□ 2.73
YIF1B-208	ENST00000587361	CAMKK2	Q96RR4	588 aa		32.12	■■■□□ 2.73
YIF1B-208	ENST00000587361	EZH2	Q15910	746 aa	Known RBP	32.11	■■■□□ 2.73
YIF1B-208	ENST00000587361	ERBB3	P21860	1342 aa		32.1	■■■□□ 2.73
YIF1B-208	ENST00000587361	CDCA8	Q53HL2	280 aa		32.1	■■■□□ 2.73
YIF1B-208	ENST00000587361	SBF2	Q86WG5	1849 aa		32.07	■■■□□ 2.73
YIF1B-208	ENST00000587361	COG3	Q96JB2	828 aa		32.06	■■■□□ 2.72
YIF1B-208	ENST00000587361	RREB1	Q92766	1687 aa		32.05	■■■□□ 2.72
YIF1B-208	ENST00000587361	BCL9	O00512	1426 aa		32.04	■■■□□ 2.72
YIF1B-208	ENST00000587361	PSD	A5PKW4	1024 aa	Predicted RBP	32.04	■■■□□ 2.72
YIF1B-208	ENST00000587361	LRP5	O75197	1615 aa		32.02	■■■□□ 2.72
YIF1B-208	ENST00000587361	MARCH10	Q8NA82	808 aa	Predicted RBP	32.02	■■■□□ 2.72
YIF1B-208	ENST00000587361	ANKRD24	Q8TF21	1146 aa		32.02	■■■□□ 2.72
YIF1B-208	ENST00000587361	NLRP2	Q9NX02	1062 aa		32.02	■■■□□ 2.72
YIF1B-208	ENST00000587361	EXOC5	O00471	708 aa		32.01	■■■□□ 2.71
YIF1B-208	ENST00000587361	TNS2	Q63HR2	1409 aa		32	■■■□□ 2.71
YIF1B-208	ENST00000587361	IP6K1	Q92551	441 aa		32	■■■□□ 2.71
YIF1B-208	ENST00000587361	NUP188	Q5SRE5	1749 aa		32	■■■□□ 2.71
YIF1B-208	ENST00000587361	RGPD3	A6NKT7	1758 aa	Predicted RBP	31.99	■■■□□ 2.71
YIF1B-208	ENST00000587361	RGPD4	Q7Z3J3	1758 aa		31.99	■■■□□ 2.71
YIF1B-208	ENST00000587361	FAM208A	Q9UK61	1670 aa	Known RBP	31.99	■■■□□ 2.71
YIF1B-208	ENST00000587361	R3HDM1	Q15032	1099 aa	Known RBP	31.98	■■■□□ 2.71
YIF1B-208	ENST00000587361	BCL11B	Q9C0K0	894 aa	Predicted RBP	31.97	■■■□□ 2.71
YIF1B-208	ENST00000587361	MYOM1	P52179	1685 aa		31.96	■■■□□ 2.71
YIF1B-208	ENST00000587361	FYB1	O15117	783 aa		31.95	■■■□□ 2.71
YIF1B-208	ENST00000587361	IL2RB	P14784	551 aa		31.95	■■■□□ 2.71
YIF1B-208	ENST00000587361	CCER1	Q8TC90	406 aa	Predicted RBP	31.95	■■■□□ 2.71
YIF1B-208	ENST00000587361	MAP3K19	Q56UN5	1328 aa		31.95	■■■□□ 2.7
YIF1B-208	ENST00000587361	KIF20B	Q96Q89	1820 aa		31.93	■■■□□ 2.7
YIF1B-208	ENST00000587361	PLSCR1	O15162	318 aa		31.93	■■■□□ 2.7
YIF1B-208	ENST00000587361	HOXC9	P31274	260 aa		31.91	■■■□□ 2.7
YIF1B-208	ENST00000587361	AMPH	P49418	695 aa		31.91	■■■□□ 2.7
YIF1B-208	ENST00000587361	GGNBP2	Q9H3C7	697 aa		31.91	■■■□□ 2.7
YIF1B-208	ENST00000587361	RTL1	A6NKG5	1358 aa		31.91	■■■□□ 2.7
YIF1B-208	ENST00000587361	NBPF14	Q5TI25	921 aa		31.9	■■■□□ 2.7
YIF1B-208	ENST00000587361	FBLN1	P23142	703 aa		31.88	■■■□□ 2.69
YIF1B-208	ENST00000587361	PTF1A	Q7RTS3	328 aa		31.88	■■■□□ 2.69
YIF1B-208	ENST00000587361	LTV1	Q96GA3	475 aa	Predicted RBP	31.87	■■■□□ 2.69
YIF1B-208	ENST00000587361	NHS	Q6T4R5	1651 aa		31.84	■■■□□ 2.69
YIF1B-208	ENST00000587361	CARD14	Q9BXL6	1004 aa		31.84	■■■□□ 2.69
YIF1B-208	ENST00000587361	NSD3	Q9BZ95	1437 aa		31.83	■■■□□ 2.69
YIF1B-208	ENST00000587361	RRS1	Q15050	365 aa	Known RBP	31.83	■■■□□ 2.69
YIF1B-208	ENST00000587361	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.81	■■■□□ 2.68	6e-7	■■■■■ 39.6
YIF1B-208	ENST00000587361	RGPD2	P0DJD1	1756 aa		31.81	■■■□□ 2.68
YIF1B-208	ENST00000587361	KIF24	Q5T7B8	1368 aa		31.79	■■■□□ 2.68
YIF1B-208	ENST00000587361	KAT6B	Q8WYB5	2073 aa		31.77	■■■□□ 2.68
YIF1B-208	ENST00000587361	SMG6	Q86US8	1419 aa	Known RBP	31.77	■■■□□ 2.68
YIF1B-208	ENST00000587361	KCNQ2	O43526	872 aa		31.77	■■■□□ 2.68
YIF1B-208	ENST00000587361	HSPA5	P11021	654 aa	Known RBP	31.75	■■■□□ 2.67
YIF1B-208	ENST00000587361	PROM2	Q8N271	834 aa		31.75	■■■□□ 2.67
YIF1B-208	ENST00000587361	ACSBG1	Q96GR2	724 aa		31.75	■■■□□ 2.67
YIF1B-208	ENST00000587361	FLT4	P35916	1363 aa		31.75	■■■□□ 2.67
YIF1B-208	ENST00000587361	INSR	P06213	1382 aa		31.74	■■■□□ 2.67
YIF1B-208	ENST00000587361	CGNL1	Q0VF96	1302 aa		31.73	■■■□□ 2.67
YIF1B-208	ENST00000587361	BTAF1	O14981	1849 aa		31.72	■■■□□ 2.67
YIF1B-208	ENST00000587361	TXNRD1	Q16881	649 aa		31.72	■■■□□ 2.67
YIF1B-208	ENST00000587361	POLR3GL	Q9BT43	218 aa		31.72	■■■□□ 2.67
YIF1B-208	ENST00000587361	NBPF6	Q5VWK0	638 aa		31.71	■■■□□ 2.67
YIF1B-208	ENST00000587361	DDX54	Q8TDD1	881 aa	Known RBP	31.71	■■■□□ 2.67
YIF1B-208	ENST00000587361	NBPF4	Q96M43	638 aa		31.71	■■■□□ 2.67
YIF1B-208	ENST00000587361	MEGF6	O75095	1541 aa		31.7	■■■□□ 2.67
YIF1B-208	ENST00000587361	HSP90AB2P	Q58FF8	381 aa		31.7	■■■□□ 2.67
YIF1B-208	ENST00000587361	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.7	■■■□□ 2.67
YIF1B-208	ENST00000587361	SHANK3	Q9BYB0	1731 aa		31.69	■■■□□ 2.66
YIF1B-208	ENST00000587361	ANKRD26	Q9UPS8	1709 aa		31.68	■■■□□ 2.66
YIF1B-208	ENST00000587361	ZCRB1	Q8TBF4	217 aa	Known RBP	31.67	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms