RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 NEUROD1Q13562 356 aa11.47□□□□□ -0.57
CAPNS1-203ENST00000586963 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
CAPNS1-203ENST00000586963 RREB1Q92766 1687 aa11.46□□□□□ -0.58
CAPNS1-203ENST00000586963 TRPM1Q7Z4N2 1603 aa11.46□□□□□ -0.58
CAPNS1-203ENST00000586963 KTN1Q86UP2 1357 aaKnown RBP11.45□□□□□ -0.58
CAPNS1-203ENST00000586963 SBNO2Q9Y2G9 1366 aa11.45□□□□□ -0.58
CAPNS1-203ENST00000586963 KCNQ2O43526 872 aa11.45□□□□□ -0.58
CAPNS1-203ENST00000586963 MARCH10Q8NA82 808 aaPredicted RBP11.45□□□□□ -0.58
CAPNS1-203ENST00000586963 SPON1Q9HCB6 807 aa11.45□□□□□ -0.58
CAPNS1-203ENST00000586963 COL18A1P39060 1754 aa11.45□□□□□ -0.58
CAPNS1-203ENST00000586963 PIK3C2AO00443 1686 aa11.45□□□□□ -0.58
CAPNS1-203ENST00000586963 EXOC5O00471 708 aa11.44□□□□□ -0.58
CAPNS1-203ENST00000586963 CSB-PGBD3P0DP91 1061 aa11.44□□□□□ -0.58
CAPNS1-203ENST00000586963 NUP188Q5SRE5 1749 aa11.43□□□□□ -0.58
CAPNS1-203ENST00000586963 PEAK1Q9H792 1746 aa11.43□□□□□ -0.58
CAPNS1-203ENST00000586963 USP31Q70CQ4 1352 aa11.43□□□□□ -0.58
CAPNS1-203ENST00000586963 CCDC7Q96M83 1385 aa11.43□□□□□ -0.58
CAPNS1-203ENST00000586963 SOX12O15370 315 aa11.43□□□□□ -0.58
CAPNS1-203ENST00000586963 PTF1AQ7RTS3 328 aa11.42□□□□□ -0.58
CAPNS1-203ENST00000586963 PROM2Q8N271 834 aa11.42□□□□□ -0.58
CAPNS1-203ENST00000586963 CARD11Q9BXL7 1154 aa11.42□□□□□ -0.58
CAPNS1-203ENST00000586963 LRRC37A3O60309 1634 aa11.42□□□□□ -0.58
CAPNS1-203ENST00000586963 NFAT5O94916 1531 aa11.41□□□□□ -0.58
CAPNS1-203ENST00000586963 ABCC6O95255 1503 aa11.41□□□□□ -0.58
CAPNS1-203ENST00000586963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.41□□□□□ -0.58
CAPNS1-203ENST00000586963 PUS7Q96PZ0 661 aaKnown RBP11.41□□□□□ -0.58
CAPNS1-203ENST00000586963 ANO8Q9HCE9 1232 aaPredicted RBP11.41□□□□□ -0.58
CAPNS1-203ENST00000586963 PPP1R1BQ9UD71 204 aaPredicted RBP11.41□□□□□ -0.58
CAPNS1-203ENST00000586963 HDGFL2Q7Z4V5 671 aaPredicted RBP11.4□□□□□ -0.58
CAPNS1-203ENST00000586963 RGPD3A6NKT7 1758 aaPredicted RBP11.4□□□□□ -0.58
CAPNS1-203ENST00000586963 AKAP12Q02952 1782 aa11.4□□□□□ -0.58
CAPNS1-203ENST00000586963 RGPD4Q7Z3J3 1758 aa11.4□□□□□ -0.58
CAPNS1-203ENST00000586963 ERBB3P21860 1342 aa11.39□□□□□ -0.59
CAPNS1-203ENST00000586963 TXNRD1Q16881 649 aa11.39□□□□□ -0.59
CAPNS1-203ENST00000586963 NME9Q86XW9 330 aa11.39□□□□□ -0.59
CAPNS1-203ENST00000586963 TMC1Q8TDI8 760 aa11.39□□□□□ -0.59
CAPNS1-203ENST00000586963 SLC12A5Q9H2X9 1139 aa11.39□□□□□ -0.59
CAPNS1-203ENST00000586963 NINLQ9Y2I6 1382 aa11.39□□□□□ -0.59
CAPNS1-203ENST00000586963 CD163L1Q9NR16 1453 aa11.38□□□□□ -0.59
CAPNS1-203ENST00000586963 TNS2Q63HR2 1409 aa11.38□□□□□ -0.59
CAPNS1-203ENST00000586963 SBF2Q86WG5 1849 aa11.38□□□□□ -0.59
CAPNS1-203ENST00000586963 DCAF8L1A6NGE4 600 aa11.38□□□□□ -0.59
CAPNS1-203ENST00000586963 NLRP2Q9NX02 1062 aa11.38□□□□□ -0.59
CAPNS1-203ENST00000586963 TERF2IPQ9NYB0 399 aa11.38□□□□□ -0.59
CAPNS1-203ENST00000586963 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
CAPNS1-203ENST00000586963 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
CAPNS1-203ENST00000586963 IL2RBP14784 551 aa11.37□□□□□ -0.59
CAPNS1-203ENST00000586963 SLC15A2Q16348 729 aa11.37□□□□□ -0.59
CAPNS1-203ENST00000586963 STK32BQ9NY57 414 aa11.37□□□□□ -0.59
CAPNS1-203ENST00000586963 YY1P25490 414 aa11.36□□□□□ -0.59
CAPNS1-203ENST00000586963 ANKRD24Q8TF21 1146 aa11.36□□□□□ -0.59
CAPNS1-203ENST00000586963 PDGFDQ9GZP0 370 aaPredicted RBP11.36□□□□□ -0.59
CAPNS1-203ENST00000586963 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
CAPNS1-203ENST00000586963 WNK3Q9BYP7 1800 aa11.35□□□□□ -0.59
CAPNS1-203ENST00000586963 ZBTB7AO95365 584 aa11.35□□□□□ -0.59
CAPNS1-203ENST00000586963 PTGER2P43116 358 aa11.35□□□□□ -0.59
CAPNS1-203ENST00000586963 IP6K1Q92551 441 aa11.35□□□□□ -0.59
CAPNS1-203ENST00000586963 TONSLQ96HA7 1378 aa11.35□□□□□ -0.59
CAPNS1-203ENST00000586963 RGPD5Q99666 1765 aa11.35□□□□□ -0.59
CAPNS1-203ENST00000586963 USP54Q70EL1 1684 aa11.34□□□□□ -0.59
CAPNS1-203ENST00000586963 A0A1W2PP64 1363 aa11.34□□□□□ -0.59
CAPNS1-203ENST00000586963 ACSBG1Q96GR2 724 aa11.34□□□□□ -0.59
CAPNS1-203ENST00000586963 TESK2Q96S53 571 aa11.34□□□□□ -0.59
CAPNS1-203ENST00000586963 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
CAPNS1-203ENST00000586963 ATF5Q9Y2D1 282 aaPredicted RBP11.33□□□□□ -0.6
CAPNS1-203ENST00000586963 CASZ1Q86V15 1759 aa11.32□□□□□ -0.6
CAPNS1-203ENST00000586963 ST20-MTHFSA0A0A6YYL1 179 aa11.31□□□□□ -0.6
CAPNS1-203ENST00000586963 COG3Q96JB2 828 aa11.31□□□□□ -0.6
CAPNS1-203ENST00000586963 SGIP1Q9BQI5 828 aa11.31□□□□□ -0.6
CAPNS1-203ENST00000586963 SYT17Q9BSW7 474 aa11.3□□□□□ -0.6
CAPNS1-203ENST00000586963 UTRNP46939 3433 aa11.3□□□□□ -0.6
CAPNS1-203ENST00000586963 NHSQ6T4R5 1651 aa11.3□□□□□ -0.6
CAPNS1-203ENST00000586963 HOXC9P31274 260 aa11.29□□□□□ -0.6
CAPNS1-203ENST00000586963 SLC27A3Q5K4L6 730 aa11.29□□□□□ -0.6
CAPNS1-203ENST00000586963 DDX54Q8TDD1 881 aaKnown RBP11.29□□□□□ -0.6
CAPNS1-203ENST00000586963 FHDC1Q9C0D6 1143 aaPredicted RBP11.29□□□□□ -0.6
CAPNS1-203ENST00000586963 LRRC4BQ9NT99 713 aa11.29□□□□□ -0.6
CAPNS1-203ENST00000586963 MAP3K19Q56UN5 1328 aa11.29□□□□□ -0.6
CAPNS1-203ENST00000586963 AMPHP49418 695 aa11.28□□□□□ -0.6
CAPNS1-203ENST00000586963 SLC16A10Q8TF71 515 aa11.28□□□□□ -0.6
CAPNS1-203ENST00000586963 LTV1Q96GA3 475 aaPredicted RBP11.28□□□□□ -0.6
CAPNS1-203ENST00000586963 ARXQ96QS3 562 aa11.28□□□□□ -0.6
CAPNS1-203ENST00000586963 LTN1O94822 1766 aa11.28□□□□□ -0.6
CAPNS1-203ENST00000586963 ANKRD36BQ8N2N9 1353 aa11.28□□□□□ -0.6
CAPNS1-203ENST00000586963 ZNF827Q17R98 1081 aa11.27□□□□□ -0.61
CAPNS1-203ENST00000586963 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
CAPNS1-203ENST00000586963 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
CAPNS1-203ENST00000586963 FYB1O15117 783 aa11.26□□□□□ -0.61
CAPNS1-203ENST00000586963 FBLN1P23142 703 aa11.26□□□□□ -0.61
CAPNS1-203ENST00000586963 PRIM1P49642 420 aaKnown RBP11.26□□□□□ -0.61
CAPNS1-203ENST00000586963 TMF1P82094 1093 aa11.26□□□□□ -0.61
CAPNS1-203ENST00000586963 PAPPAQ13219 1627 aa11.26□□□□□ -0.61
CAPNS1-203ENST00000586963 MAP3K5Q99683 1374 aa11.26□□□□□ -0.61
CAPNS1-203ENST00000586963 MYOM1P52179 1685 aa11.25□□□□□ -0.61
CAPNS1-203ENST00000586963 CGNL1Q0VF96 1302 aa11.25□□□□□ -0.61
CAPNS1-203ENST00000586963 RTL1A6NKG5 1358 aa11.25□□□□□ -0.61
CAPNS1-203ENST00000586963 BTAF1O14981 1849 aa11.24□□□□□ -0.61
CAPNS1-203ENST00000586963 NBPF6Q5VWK0 638 aa11.24□□□□□ -0.61
CAPNS1-203ENST00000586963 SYTL4Q96C24 671 aaPredicted RBP11.24□□□□□ -0.61
CAPNS1-203ENST00000586963 NBPF4Q96M43 638 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms