RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PRKRIP1Q9H875 184 aaPredicted RBP17.14■□□□□ 0.33
VMP1-202ENST00000585847 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
VMP1-202ENST00000585847 COL14A1Q05707 1796 aaKnown RBP17.13■□□□□ 0.33
VMP1-202ENST00000585847 AATKQ6ZMQ8 1374 aa17.13■□□□□ 0.33
VMP1-202ENST00000585847 CHRNA2Q15822 529 aa17.12■□□□□ 0.33
VMP1-202ENST00000585847 SLIT2O94813 1529 aa17.11■□□□□ 0.33
VMP1-202ENST00000585847 CAMTA1Q9Y6Y1 1673 aa17.11■□□□□ 0.33
VMP1-202ENST00000585847 NRAPQ86VF7 1730 aa17.11■□□□□ 0.33
VMP1-202ENST00000585847 HAP1P54257 671 aaPredicted RBP17.11■□□□□ 0.33
VMP1-202ENST00000585847 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
VMP1-202ENST00000585847 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
VMP1-202ENST00000585847 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
VMP1-202ENST00000585847 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
VMP1-202ENST00000585847 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
VMP1-202ENST00000585847 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
VMP1-202ENST00000585847 BCL9LQ86UU0 1499 aa17.1■□□□□ 0.33
VMP1-202ENST00000585847 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
VMP1-202ENST00000585847 GJD4Q96KN9 370 aaPredicted RBP17.09■□□□□ 0.33
VMP1-202ENST00000585847 POLKQ9UBT6 870 aa17.09■□□□□ 0.33
VMP1-202ENST00000585847 AXIN2Q9Y2T1 843 aa17.09■□□□□ 0.33
VMP1-202ENST00000585847 EMILIN1Q9Y6C2 1016 aa17.09■□□□□ 0.33
VMP1-202ENST00000585847 SMG6Q86US8 1419 aaKnown RBP17.09■□□□□ 0.33
VMP1-202ENST00000585847 ABCC6O95255 1503 aa17.08■□□□□ 0.32
VMP1-202ENST00000585847 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.32
VMP1-202ENST00000585847 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.32
VMP1-202ENST00000585847 SRCAPQ6ZRS2 3230 aa17.08■□□□□ 0.32
VMP1-202ENST00000585847 EP400Q96L91 3159 aa17.08■□□□□ 0.32
VMP1-202ENST00000585847 MYBBP1AQ9BQG0 1328 aaKnown RBP17.07■□□□□ 0.32
VMP1-202ENST00000585847 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
VMP1-202ENST00000585847 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
VMP1-202ENST00000585847 HOXC9P31274 260 aa17.05■□□□□ 0.32
VMP1-202ENST00000585847 IP6K1Q92551 441 aa17.05■□□□□ 0.32
VMP1-202ENST00000585847 UNC5CLQ8IV45 518 aa17.04■□□□□ 0.32
VMP1-202ENST00000585847 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
VMP1-202ENST00000585847 COL5A2P05997 1499 aaPredicted RBP17.04■□□□□ 0.32
VMP1-202ENST00000585847 RTL1A6NKG5 1358 aa17.03■□□□□ 0.32
VMP1-202ENST00000585847 RGPD2P0DJD1 1756 aa17.03■□□□□ 0.32
VMP1-202ENST00000585847 PPP2R1AP30153 589 aa17.03■□□□□ 0.32
VMP1-202ENST00000585847 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.32
VMP1-202ENST00000585847 HSP90AB2PQ58FF8 381 aa17.02■□□□□ 0.32
VMP1-202ENST00000585847 FLT4P35916 1363 aa17.02■□□□□ 0.31
VMP1-202ENST00000585847 COL3A1P02461 1466 aaPredicted RBP17.01■□□□□ 0.31
VMP1-202ENST00000585847 AMPHP49418 695 aa17.01■□□□□ 0.31
VMP1-202ENST00000585847 MTHFSP49914 203 aa17.01■□□□□ 0.31
VMP1-202ENST00000585847 SF3B2Q13435 895 aaKnown RBP17.01■□□□□ 0.31
VMP1-202ENST00000585847 BLMP54132 1417 aaPredicted RBP17.01■□□□□ 0.31
VMP1-202ENST00000585847 GLI3P10071 1580 aa17.01■□□□□ 0.31
VMP1-202ENST00000585847 INSRP06213 1382 aa17.01■□□□□ 0.31
VMP1-202ENST00000585847 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
VMP1-202ENST00000585847 ERBB3P21860 1342 aa16.99■□□□□ 0.31
VMP1-202ENST00000585847 LARP1Q6PKG0 1096 aaKnown RBP16.98■□□□□ 0.31
VMP1-202ENST00000585847 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
VMP1-202ENST00000585847 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
VMP1-202ENST00000585847 STRN4Q9NRL3 753 aa16.97■□□□□ 0.31
VMP1-202ENST00000585847 BRWD3Q6RI45 1802 aa16.97■□□□□ 0.31
VMP1-202ENST00000585847 FAM208AQ9UK61 1670 aaKnown RBP16.97■□□□□ 0.31
VMP1-202ENST00000585847 WDR17Q8IZU2 1322 aa16.96■□□□□ 0.31
VMP1-202ENST00000585847 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.31
VMP1-202ENST00000585847 A0A0G2JS52 829 aa16.96■□□□□ 0.31
VMP1-202ENST00000585847 MYT1Q01538 1121 aa16.96■□□□□ 0.31
VMP1-202ENST00000585847 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
VMP1-202ENST00000585847 VPS72Q15906 364 aa16.96■□□□□ 0.31
VMP1-202ENST00000585847 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
VMP1-202ENST00000585847 SEPT12Q8IYM1 358 aa16.95■□□□□ 0.3
VMP1-202ENST00000585847 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
VMP1-202ENST00000585847 SPATA31A5Q5VU36 1347 aa16.95■□□□□ 0.3
VMP1-202ENST00000585847 SPATA31A7Q8IWB4 1347 aa16.95■□□□□ 0.3
VMP1-202ENST00000585847 IL13P35225 146 aa16.94■□□□□ 0.3
VMP1-202ENST00000585847 MRS2Q9HD23 443 aa16.94■□□□□ 0.3
VMP1-202ENST00000585847 CRB1P82279 1406 aa16.94■□□□□ 0.3
VMP1-202ENST00000585847 NCAPD2Q15021 1401 aa16.94■□□□□ 0.3
VMP1-202ENST00000585847 SPATA31A1Q5TZJ5 1347 aa16.94■□□□□ 0.3
VMP1-202ENST00000585847 EVA1CP58658 441 aa16.93■□□□□ 0.3
VMP1-202ENST00000585847 CCDC184Q52MB2 194 aa16.93■□□□□ 0.3
VMP1-202ENST00000585847 DEFB132Q7Z7B7 95 aa16.93■□□□□ 0.3
VMP1-202ENST00000585847 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
VMP1-202ENST00000585847 NBPF6Q5VWK0 638 aa16.92■□□□□ 0.3
VMP1-202ENST00000585847 KRT27Q7Z3Y8 459 aa16.92■□□□□ 0.3
VMP1-202ENST00000585847 NBPF4Q96M43 638 aa16.92■□□□□ 0.3
VMP1-202ENST00000585847 EYA1Q99502 592 aa16.91■□□□□ 0.3
VMP1-202ENST00000585847 CARD10Q9BWT7 1032 aa16.91■□□□□ 0.3
VMP1-202ENST00000585847 TOM1L2Q6ZVM7 507 aa16.9■□□□□ 0.3
VMP1-202ENST00000585847 DISP2A7MBM2 1401 aa16.89■□□□□ 0.29
VMP1-202ENST00000585847 THSD7AQ9UPZ6 1657 aa16.89■□□□□ 0.29
VMP1-202ENST00000585847 CSB-PGBD3P0DP91 1061 aa16.89■□□□□ 0.29
VMP1-202ENST00000585847 IGSF1Q8N6C5 1336 aa16.89■□□□□ 0.29
VMP1-202ENST00000585847 USHBP1Q8N6Y0 703 aa16.88■□□□□ 0.29
VMP1-202ENST00000585847 NLRP2Q9NX02 1062 aa16.88■□□□□ 0.29
VMP1-202ENST00000585847 ONECUT3O60422 494 aaPredicted RBP16.87■□□□□ 0.29
VMP1-202ENST00000585847 DIAPH1O60610 1272 aaKnown RBP16.87■□□□□ 0.29
VMP1-202ENST00000585847 BAG6P46379 1132 aa16.87■□□□□ 0.29
VMP1-202ENST00000585847 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
VMP1-202ENST00000585847 BARGINQ6ZT62 677 aa16.86■□□□□ 0.29
VMP1-202ENST00000585847 TCP11L2Q8N4U5 519 aa16.86■□□□□ 0.29
VMP1-202ENST00000585847 MEGF6O75095 1541 aa16.86■□□□□ 0.29
VMP1-202ENST00000585847 PARP4Q9UKK3 1724 aaKnown RBP16.85■□□□□ 0.29
VMP1-202ENST00000585847 FAM98CQ17RN3 349 aaKnown RBP16.85■□□□□ 0.29
VMP1-202ENST00000585847 AEBP1Q8IUX7 1158 aa16.85■□□□□ 0.29
VMP1-202ENST00000585847 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
VMP1-202ENST00000585847 THRAP3Q9Y2W1 955 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms