RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 TRMT2AQ8IZ69 625 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-208ENST00000585799 NLRP2Q9NX02 1062 aa15.6■□□□□ 0.09
SMARCA4-208ENST00000585799 TBX22Q9Y458 520 aa15.6■□□□□ 0.09
SMARCA4-208ENST00000585799 IQGAP1P46940 1657 aa15.6■□□□□ 0.09
SMARCA4-208ENST00000585799 MAP3K19Q56UN5 1328 aa15.6■□□□□ 0.09
SMARCA4-208ENST00000585799 NEXMIFQ5QGS0 1516 aa15.59■□□□□ 0.09
SMARCA4-208ENST00000585799 TULP4Q9NRJ4 1543 aa15.59■□□□□ 0.09
SMARCA4-208ENST00000585799 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-208ENST00000585799 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
SMARCA4-208ENST00000585799 DEKP35659 375 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-208ENST00000585799 GAS2L2Q8NHY3 880 aa15.58■□□□□ 0.09
SMARCA4-208ENST00000585799 F6X3S4 739 aa15.58■□□□□ 0.08
SMARCA4-208ENST00000585799 C1orf141Q5JVX7 400 aa15.58■□□□□ 0.08
SMARCA4-208ENST00000585799 IFT57Q9NWB7 429 aa15.58■□□□□ 0.08
SMARCA4-208ENST00000585799 PLEKHF1Q96S99 279 aa15.58■□□□□ 0.08
SMARCA4-208ENST00000585799 ZNF330Q9Y3S2 320 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-208ENST00000585799 ZFYVE9O95405 1425 aa15.57■□□□□ 0.08
SMARCA4-208ENST00000585799 INSRP06213 1382 aa15.57■□□□□ 0.08
SMARCA4-208ENST00000585799 QRICH2Q9H0J4 1663 aa15.57■□□□□ 0.08
SMARCA4-208ENST00000585799 CFAP44Q96MT7 982 aa15.57■□□□□ 0.08
SMARCA4-208ENST00000585799 ALKQ9UM73 1620 aa15.57■□□□□ 0.08
SMARCA4-208ENST00000585799 PIK3C2BO00750 1634 aa15.56■□□□□ 0.08
SMARCA4-208ENST00000585799 ADGRB1O14514 1584 aa15.56■□□□□ 0.08
SMARCA4-208ENST00000585799 EDC4Q6P2E9 1401 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-208ENST00000585799 NRXN1Q9ULB1 1477 aa15.55■□□□□ 0.08
SMARCA4-208ENST00000585799 DIP2BQ9P265 1576 aa15.55■□□□□ 0.08
SMARCA4-208ENST00000585799 VAMP4O75379 141 aa15.55■□□□□ 0.08
SMARCA4-208ENST00000585799 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-208ENST00000585799 HSPA2P54652 639 aa15.55■□□□□ 0.08
SMARCA4-208ENST00000585799 ZNF530Q6P9A1 599 aaPredicted RBP15.55■□□□□ 0.08
SMARCA4-208ENST00000585799 EYA1Q99502 592 aa15.55■□□□□ 0.08
SMARCA4-208ENST00000585799 MTHFSDQ2M296 383 aaKnown RBP15.54■□□□□ 0.08
SMARCA4-208ENST00000585799 ORAI2Q96SN7 254 aa15.54■□□□□ 0.08
SMARCA4-208ENST00000585799 CLTCQ00610 1675 aaKnown RBP15.54■□□□□ 0.08
SMARCA4-208ENST00000585799 IL16Q14005 1332 aa15.53■□□□□ 0.08
SMARCA4-208ENST00000585799 AIMP1Q12904 312 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-208ENST00000585799 HSCBQ8IWL3 235 aa15.53■□□□□ 0.08
SMARCA4-208ENST00000585799 LRRC59Q96AG4 307 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-208ENST00000585799 KDM2BQ8NHM5 1336 aa15.53■□□□□ 0.08
SMARCA4-208ENST00000585799 SETBP1Q9Y6X0 1596 aa15.53■□□□□ 0.08
SMARCA4-208ENST00000585799 HMMRO75330 724 aa15.52■□□□□ 0.08
SMARCA4-208ENST00000585799 PTPRMP28827 1452 aa15.52■□□□□ 0.08
SMARCA4-208ENST00000585799 ALDH1L2Q3SY69 923 aa15.52■□□□□ 0.08
SMARCA4-208ENST00000585799 HDGFL1Q5TGJ6 251 aa15.52■□□□□ 0.08
SMARCA4-208ENST00000585799 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.07
SMARCA4-208ENST00000585799 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.07
SMARCA4-208ENST00000585799 USP35Q9P2H5 1018 aa15.52■□□□□ 0.07
SMARCA4-208ENST00000585799 GNAT3A8MTJ3 354 aa15.51■□□□□ 0.07
SMARCA4-208ENST00000585799 AAMPQ13685 434 aa15.51■□□□□ 0.07
SMARCA4-208ENST00000585799 CASC1Q6TDU7 716 aa15.51■□□□□ 0.07
SMARCA4-208ENST00000585799 PLEKHG3A1L390 1219 aa15.51■□□□□ 0.07
SMARCA4-208ENST00000585799 RAPGEF4Q8WZA2 1011 aa15.51■□□□□ 0.07
SMARCA4-208ENST00000585799 ANXA1P04083 346 aa15.5■□□□□ 0.07
SMARCA4-208ENST00000585799 TPRNQ4KMQ1 711 aa15.5■□□□□ 0.07
SMARCA4-208ENST00000585799 SEC24BO95487 1268 aa15.5■□□□□ 0.07
SMARCA4-208ENST00000585799 MRPL50Q8N5N7 158 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-208ENST00000585799 C8orf34Q49A92 452 aa15.5■□□□□ 0.07
SMARCA4-208ENST00000585799 DDX17Q92841 729 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-208ENST00000585799 CHD1LQ86WJ1 897 aa15.49■□□□□ 0.07
SMARCA4-208ENST00000585799 C22orf23Q9BZE7 217 aa15.49■□□□□ 0.07
SMARCA4-208ENST00000585799 SMARCA5O60264 1052 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-208ENST00000585799 CABLES1Q8TDN4 633 aa15.49■□□□□ 0.07
SMARCA4-208ENST00000585799 KRT28Q7Z3Y7 464 aa15.48■□□□□ 0.07
SMARCA4-208ENST00000585799 RILPL2Q969X0 211 aa15.48■□□□□ 0.07
SMARCA4-208ENST00000585799 TTC21AQ8NDW8 1320 aa15.48■□□□□ 0.07
SMARCA4-208ENST00000585799 CCDC30Q5VVM6 783 aa15.48■□□□□ 0.07
SMARCA4-208ENST00000585799 CHRNA2Q15822 529 aa15.48■□□□□ 0.07
SMARCA4-208ENST00000585799 PLEKHO1Q53GL0 409 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-208ENST00000585799 NOL8Q76FK4 1167 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-208ENST00000585799 PLEKHG1Q9ULL1 1385 aa15.47■□□□□ 0.07
SMARCA4-208ENST00000585799 PREX1Q8TCU6 1659 aa15.47■□□□□ 0.07
SMARCA4-208ENST00000585799 PPLO60437 1756 aa15.47■□□□□ 0.07
SMARCA4-208ENST00000585799 RICTORQ6R327 1708 aa15.47■□□□□ 0.07
SMARCA4-208ENST00000585799 SIRT1Q96EB6 747 aa15.46■□□□□ 0.07
SMARCA4-208ENST00000585799 KIAA1210Q9ULL0 1709 aa15.46■□□□□ 0.07
SMARCA4-208ENST00000585799 HOXC9P31274 260 aa15.46■□□□□ 0.06
SMARCA4-208ENST00000585799 GZF1Q9H116 711 aaPredicted RBP15.46■□□□□ 0.06
SMARCA4-208ENST00000585799 CCDC9Q9Y3X0 531 aaKnown RBP15.46■□□□□ 0.06
SMARCA4-208ENST00000585799 ARHGEF40Q8TER5 1519 aa15.46■□□□□ 0.06
SMARCA4-208ENST00000585799 EXOC6BQ9Y2D4 811 aa15.45■□□□□ 0.06
SMARCA4-208ENST00000585799 SIGLEC1Q9BZZ2 1709 aa15.45■□□□□ 0.06
SMARCA4-208ENST00000585799 FLT4P35916 1363 aa15.45■□□□□ 0.06
SMARCA4-208ENST00000585799 MEIS3Q99687 375 aa15.45■□□□□ 0.06
SMARCA4-208ENST00000585799 C9orf78Q9NZ63 289 aaPredicted RBP15.45■□□□□ 0.06
SMARCA4-208ENST00000585799 G2E3Q7L622 706 aa15.44■□□□□ 0.06
SMARCA4-208ENST00000585799 STRN4Q9NRL3 753 aa15.44■□□□□ 0.06
SMARCA4-208ENST00000585799 ZBTB40Q9NUA8 1239 aa15.44■□□□□ 0.06
SMARCA4-208ENST00000585799 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-208ENST00000585799 CHMP3Q9Y3E7 222 aa15.44■□□□□ 0.06
SMARCA4-208ENST00000585799 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-208ENST00000585799 BTBD11A6QL63 1104 aa15.43■□□□□ 0.06
SMARCA4-208ENST00000585799 UBTFL1P0CB47 393 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-208ENST00000585799 KCNH5Q8NCM2 988 aa15.43■□□□□ 0.06
SMARCA4-208ENST00000585799 EVA1CP58658 441 aa15.43■□□□□ 0.06
SMARCA4-208ENST00000585799 TMEM131LA2VDJ0 1609 aa15.43■□□□□ 0.06
SMARCA4-208ENST00000585799 GCC1Q96CN9 775 aa15.42■□□□□ 0.06
SMARCA4-208ENST00000585799 ATP7BP35670 1465 aa15.42■□□□□ 0.06
SMARCA4-208ENST00000585799 NFKBIBQ15653 356 aa15.42■□□□□ 0.06
SMARCA4-208ENST00000585799 NCLP19338 710 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-208ENST00000585799 GCP02774 474 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms