RNA–Protein interactions for RNA: ENST00000584992.1

RIOK3-211, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 396 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-211ENST00000584992 ARID3AQ99856 593 aa7.86□□□□□ -1.15
RIOK3-211ENST00000584992 PIK3CDO00329 1044 aa7.85□□□□□ -1.15
RIOK3-211ENST00000584992 FSHRP23945 695 aa7.85□□□□□ -1.15
RIOK3-211ENST00000584992 TRIM67Q6ZTA4 783 aa7.85□□□□□ -1.15
RIOK3-211ENST00000584992 CYP4X1Q8N118 509 aa7.85□□□□□ -1.15
RIOK3-211ENST00000584992 SNIP1Q8TAD8 396 aaKnown RBP7.85□□□□□ -1.15
RIOK3-211ENST00000584992 CDK15Q96Q40 435 aa7.85□□□□□ -1.15
RIOK3-211ENST00000584992 MAP4K5Q9Y4K4 846 aa7.85□□□□□ -1.15
RIOK3-211ENST00000584992 ADH1CP00326 375 aa7.84□□□□□ -1.15
RIOK3-211ENST00000584992 RNF135Q8IUD6 432 aa7.84□□□□□ -1.15
RIOK3-211ENST00000584992 MPNDQ8N594 471 aa7.84□□□□□ -1.15
RIOK3-211ENST00000584992 UCN2Q96RP3 112 aa7.84□□□□□ -1.15
RIOK3-211ENST00000584992 SERPINA10Q9UK55 444 aa7.84□□□□□ -1.15
RIOK3-211ENST00000584992 WASF2Q9Y6W5 498 aa7.84□□□□□ -1.15
RIOK3-211ENST00000584992 SKIP12755 728 aa7.83□□□□□ -1.16
RIOK3-211ENST00000584992 PDZRN3Q9UPQ7 1066 aa7.83□□□□□ -1.16
RIOK3-211ENST00000584992 ESPNB1AK53 854 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 J3QL48 77 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 GRM5P41594 1212 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 PRR20EP86478 221 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 PRR20CP86479 221 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 PRR20DP86480 221 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 PRR20BP86481 221 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 PRR20AP86496 221 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 INTS6LQ5JSJ4 861 aaKnown RBP7.82□□□□□ -1.16
RIOK3-211ENST00000584992 RNF20Q5VTR2 975 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 TBC1D9Q6ZT07 1266 aa7.82□□□□□ -1.16
RIOK3-211ENST00000584992 TFIP11Q9UBB9 837 aaKnown RBP7.82□□□□□ -1.16
RIOK3-211ENST00000584992 PHTF2Q8N3S3 785 aa7.81□□□□□ -1.16
RIOK3-211ENST00000584992 PPP1R12CQ9BZL4 782 aa7.81□□□□□ -1.16
RIOK3-211ENST00000584992 TOR4AQ9NXH8 423 aa7.81□□□□□ -1.16
RIOK3-211ENST00000584992 PALM3A6NDB9 673 aaPredicted RBP7.8□□□□□ -1.16
RIOK3-211ENST00000584992 ATP9BO43861 1147 aa7.8□□□□□ -1.16
RIOK3-211ENST00000584992 NR3C2P08235 984 aa7.8□□□□□ -1.16
RIOK3-211ENST00000584992 NR5A1Q13285 461 aa7.8□□□□□ -1.16
RIOK3-211ENST00000584992 NNTQ13423 1086 aa7.8□□□□□ -1.16
RIOK3-211ENST00000584992 TSGA10IPQ3SY00 556 aa7.8□□□□□ -1.16
RIOK3-211ENST00000584992 SEPT12Q8IYM1 358 aa7.8□□□□□ -1.16
RIOK3-211ENST00000584992 PLPP7Q8NBV4 271 aa7.8□□□□□ -1.16
RIOK3-211ENST00000584992 CCDC85AQ96PX6 553 aaPredicted RBP7.8□□□□□ -1.16
RIOK3-211ENST00000584992 PCDHB11Q9Y5F2 797 aa7.8□□□□□ -1.16
RIOK3-211ENST00000584992 SMPD1P17405 629 aa7.79□□□□□ -1.16
RIOK3-211ENST00000584992 RFX1P22670 979 aa7.79□□□□□ -1.16
RIOK3-211ENST00000584992 CCDC116Q8IYX3 515 aa7.79□□□□□ -1.16
RIOK3-211ENST00000584992 DOLKQ9UPQ8 538 aa7.79□□□□□ -1.16
RIOK3-211ENST00000584992 USP17L5A8MUK1 530 aa7.78□□□□□ -1.16
RIOK3-211ENST00000584992 ERVH48-1M5A8F1 160 aa7.78□□□□□ -1.16
RIOK3-211ENST00000584992 LMOD1P29536 600 aaPredicted RBP7.78□□□□□ -1.16
RIOK3-211ENST00000584992 DHX9Q08211 1270 aaKnown RBP7.78□□□□□ -1.16
RIOK3-211ENST00000584992 DEPDC4Q8N2C3 294 aa7.78□□□□□ -1.16
RIOK3-211ENST00000584992 NFATC2IPQ8NCF5 419 aa7.78□□□□□ -1.16
RIOK3-211ENST00000584992 TMPRSS4Q9NRS4 437 aa7.78□□□□□ -1.16
RIOK3-211ENST00000584992 GFRA3O60609 400 aa7.77□□□□□ -1.17
RIOK3-211ENST00000584992 MAP7D1Q3KQU3 841 aa7.77□□□□□ -1.17
RIOK3-211ENST00000584992 OXLD1Q5BKU9 147 aa7.77□□□□□ -1.17
RIOK3-211ENST00000584992 CFAP70Q5T0N1 1121 aa7.77□□□□□ -1.17
RIOK3-211ENST00000584992 PPP1R26Q5T8A7 1209 aaPredicted RBP7.77□□□□□ -1.17
RIOK3-211ENST00000584992 CDCA7Q9BWT1 371 aaPredicted RBP7.77□□□□□ -1.17
RIOK3-211ENST00000584992 MAFBQ9Y5Q3 323 aaPredicted RBP7.77□□□□□ -1.17
RIOK3-211ENST00000584992 USP17L3A6NCW0 530 aa7.76□□□□□ -1.17
RIOK3-211ENST00000584992 USP17L4A6NCW7 530 aa7.76□□□□□ -1.17
RIOK3-211ENST00000584992 FAM187AA6NFU0 413 aa7.76□□□□□ -1.17
RIOK3-211ENST00000584992 NCOA4Q13772 614 aa7.76□□□□□ -1.17
RIOK3-211ENST00000584992 USP17L2Q6R6M4 530 aa7.76□□□□□ -1.17
RIOK3-211ENST00000584992 USP17L1Q7RTZ2 530 aa7.76□□□□□ -1.17
RIOK3-211ENST00000584992 CCDC125Q86Z20 511 aa7.76□□□□□ -1.17
RIOK3-211ENST00000584992 CYLDQ9NQC7 956 aa7.76□□□□□ -1.17
RIOK3-211ENST00000584992 TRAF7Q6Q0C0 670 aa7.75□□□□□ -1.17
RIOK3-211ENST00000584992 ZNF784Q8NCA9 323 aaPredicted RBP7.75□□□□□ -1.17
RIOK3-211ENST00000584992 HPS1Q92902 700 aa7.75□□□□□ -1.17
RIOK3-211ENST00000584992 ESF1Q9H501 851 aaKnown RBP7.75□□□□□ -1.17
RIOK3-211ENST00000584992 PGPEP1Q9NXJ5 209 aa7.75□□□□□ -1.17
RIOK3-211ENST00000584992 CHIC2Q9UKJ5 165 aa7.75□□□□□ -1.17
RIOK3-211ENST00000584992 EMILIN1Q9Y6C2 1016 aa7.75□□□□□ -1.17
RIOK3-211ENST00000584992 WDR4P57081 412 aaKnown RBP7.74□□□□□ -1.17
RIOK3-211ENST00000584992 EML3Q32P44 896 aa7.74□□□□□ -1.17
RIOK3-211ENST00000584992 ZIC2O95409 532 aaPredicted RBP7.73□□□□□ -1.17
RIOK3-211ENST00000584992 MYCP01106 439 aaPredicted RBP7.73□□□□□ -1.17
RIOK3-211ENST00000584992 SCTRP47872 440 aa7.73□□□□□ -1.17
RIOK3-211ENST00000584992 MYT1Q01538 1121 aa7.73□□□□□ -1.17
RIOK3-211ENST00000584992 CDCA8Q53HL2 280 aa7.73□□□□□ -1.17
RIOK3-211ENST00000584992 PLEKHM2Q8IWE5 1019 aa7.73□□□□□ -1.17
RIOK3-211ENST00000584992 ITPKCQ96DU7 683 aa7.73□□□□□ -1.17
RIOK3-211ENST00000584992 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.72□□□□□ -1.17
RIOK3-211ENST00000584992 NRG2O14511 850 aaPredicted RBP7.72□□□□□ -1.17
RIOK3-211ENST00000584992 LZTS3O60299 673 aaPredicted RBP7.72□□□□□ -1.17
RIOK3-211ENST00000584992 USP4Q13107 963 aa7.72□□□□□ -1.17
RIOK3-211ENST00000584992 CC2D2BQ6DHV5 1058 aa7.72□□□□□ -1.17
RIOK3-211ENST00000584992 TRIM52Q96A61 297 aa7.72□□□□□ -1.17
RIOK3-211ENST00000584992 ZFAND3Q9H8U3 227 aa7.72□□□□□ -1.17
RIOK3-211ENST00000584992 MKRN1Q9UHC7 482 aaKnown RBP7.72□□□□□ -1.17
RIOK3-211ENST00000584992 NOD1Q9Y239 953 aa7.72□□□□□ -1.17
RIOK3-211ENST00000584992 TIMP2P16035 220 aa7.71□□□□□ -1.18
RIOK3-211ENST00000584992 ERVK-9P63128 1117 aa7.71□□□□□ -1.18
RIOK3-211ENST00000584992 PKDCCQ504Y2 493 aa7.71□□□□□ -1.18
RIOK3-211ENST00000584992 SIRT1Q96EB6 747 aa7.71□□□□□ -1.18
RIOK3-211ENST00000584992 IRX2Q9BZI1 471 aaPredicted RBP7.71□□□□□ -1.18
RIOK3-211ENST00000584992 VRTNQ9H8Y1 702 aa7.71□□□□□ -1.18
RIOK3-211ENST00000584992 LILRA1O75019 489 aa7.7□□□□□ -1.18
RIOK3-211ENST00000584992 CBLBQ13191 982 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms