RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 WDR4P57081 412 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-211ENST00000584897 MAP3K10Q02779 954 aa3.38□□□□□ -1.87
SMCHD1-211ENST00000584897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.38□□□□□ -1.87
SMCHD1-211ENST00000584897 SH3D19Q5HYK7 790 aa3.38□□□□□ -1.87
SMCHD1-211ENST00000584897 SEPT12Q8IYM1 358 aa3.38□□□□□ -1.87
SMCHD1-211ENST00000584897 MRGPRX2Q96LB1 330 aa3.38□□□□□ -1.87
SMCHD1-211ENST00000584897 BAZ1BQ9UIG0 1483 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-211ENST00000584897 ZNF511Q8NB15 262 aa3.37□□□□□ -1.87
SMCHD1-211ENST00000584897 SYNJ1O43426 1573 aa3.37□□□□□ -1.87
SMCHD1-211ENST00000584897 MYCP01106 439 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-211ENST00000584897 AAASQ9NRG9 546 aa3.37□□□□□ -1.87
SMCHD1-211ENST00000584897 PKD2L1Q9P0L9 805 aa3.37□□□□□ -1.87
SMCHD1-211ENST00000584897 PHF20L1A8MW92 1017 aa3.37□□□□□ -1.87
SMCHD1-211ENST00000584897 H7C1W4 665 aa3.37□□□□□ -1.87
SMCHD1-211ENST00000584897 C1orf115Q9H7X2 142 aa3.37□□□□□ -1.87
SMCHD1-211ENST00000584897 TOP2BQ02880 1626 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 MOXD2PA6NHM9 499 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 TERTO14746 1132 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 MARSP56192 900 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 TRERF1Q96PN7 1200 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 RBM19Q9Y4C8 960 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 MAPKBP1O60336 1514 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 URB2Q14146 1524 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 BMP2P12643 396 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 NNTQ13423 1086 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 BANK1Q8NDB2 785 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 GOPCQ9HD26 462 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 PODNQ7Z5L7 613 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 BAP1Q92560 729 aa3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 NXF1Q9UBU9 619 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-211ENST00000584897 TARBP1Q13395 1621 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 TRMT44Q8IYL2 757 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 CCDC116Q8IYX3 515 aa3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 NLRP3Q96P20 1036 aa3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 SHROOM2Q13796 1616 aa3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 SMPD1P17405 629 aa3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 RANGAP1P46060 587 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 ESCO1Q5FWF5 840 aa3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 HOMEZQ8IX15 550 aa3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 LINC01559Q495D7 138 aa3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 FBXO31Q5XUX0 539 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 DIP2BQ9P265 1576 aa3.35□□□□□ -1.87
SMCHD1-211ENST00000584897 CDK15Q96Q40 435 aa3.34□□□□□ -1.87
SMCHD1-211ENST00000584897 SOX11P35716 441 aa3.34□□□□□ -1.87
SMCHD1-211ENST00000584897 CSPP1Q1MSJ5 1256 aa3.34□□□□□ -1.87
SMCHD1-211ENST00000584897 MRPL14Q6P1L8 145 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-211ENST00000584897 SV2AQ7L0J3 742 aa3.34□□□□□ -1.87
SMCHD1-211ENST00000584897 CYP2U1Q7Z449 544 aa3.34□□□□□ -1.88
SMCHD1-211ENST00000584897 ARXQ96QS3 562 aa3.34□□□□□ -1.88
SMCHD1-211ENST00000584897 ADGRL1O94910 1474 aa3.34□□□□□ -1.88
SMCHD1-211ENST00000584897 EIF4G2P78344 907 aaKnown RBP eCLIP3.34□□□□□ -1.88
SMCHD1-211ENST00000584897 SCARF2Q96GP6 870 aaPredicted RBP3.34□□□□□ -1.88
SMCHD1-211ENST00000584897 CHMP3Q9Y3E7 222 aa3.34□□□□□ -1.88
SMCHD1-211ENST00000584897 AP1G2O75843 785 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 SH3BP2P78314 561 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 FKBPLQ9UIM3 349 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 FANCD2Q9BXW9 1451 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 WIPF1O43516 503 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 LILRB3O75022 631 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 HRCP23327 699 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 CYB5RLQ6IPT4 315 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 ALYREFQ86V81 257 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 SYNJ2O15056 1496 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 IQSEC2Q5JU85 1478 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 RAD21O60216 631 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 NDUFV2P19404 249 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 FOXK2Q01167 660 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 GNASQ5JWF2 1037 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 PARP9Q8IXQ6 854 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 ZSCAN1Q8NBB4 408 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 ZNF775Q96BV0 537 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 GMPR2Q9P2T1 348 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 ABCC8Q09428 1581 aa3.33□□□□□ -1.88
SMCHD1-211ENST00000584897 CFTRP13569 1480 aa3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 ABCC10Q5T3U5 1492 aa3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 MAGEB6P1A0A0J9YX57 407 aa3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 ZIC2O95409 532 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 PPRC1Q5VV67 1664 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 ILDR2Q71H61 639 aa3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 NEUROD4Q9HD90 331 aa3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 SPDYE3A6NKU9 549 aa3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 LZTS3O60299 673 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 IGHA1P01876 353 aa3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 WASHC4Q2M389 1173 aa3.32□□□□□ -1.88
SMCHD1-211ENST00000584897 GPC1P35052 558 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 NEUROD1Q13562 356 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 NEUROD2Q15784 382 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 MYSM1Q5VVJ2 828 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 KANK3Q6NY19 840 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 NBPF15Q8N660 670 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 PRDM9Q9NQV7 894 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 GLI2P10070 1586 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 CSB-PGBD3P0DP91 1061 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 PGBD3Q8N328 593 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 LBRQ14739 615 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 SLC24A3Q9HC58 644 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 GAPVD1Q14C86 1478 aa3.31□□□□□ -1.88
SMCHD1-211ENST00000584897 HIF1AQ16665 826 aa3.3□□□□□ -1.88
SMCHD1-211ENST00000584897 NLRP7Q8WX94 980 aa3.3□□□□□ -1.88
SMCHD1-211ENST00000584897 C1QTNF2Q9BXJ5 285 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms