RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 AATKQ6ZMQ8 1374 aa12.29□□□□□ -0.44
SRSF1-207ENST00000584668 BCL9O00512 1426 aa12.28□□□□□ -0.44
SRSF1-207ENST00000584668 WDR17Q8IZU2 1322 aa12.26□□□□□ -0.45
SRSF1-207ENST00000584668 USP6P35125 1406 aa12.26□□□□□ -0.45
SRSF1-207ENST00000584668 ZBTB7AO95365 584 aa12.25□□□□□ -0.45
SRSF1-207ENST00000584668 NLRP6P59044 892 aa12.25□□□□□ -0.45
SRSF1-207ENST00000584668 ZNF784Q8NCA9 323 aaPredicted RBP12.25□□□□□ -0.45
SRSF1-207ENST00000584668 ANO8Q9HCE9 1232 aaPredicted RBP12.25□□□□□ -0.45
SRSF1-207ENST00000584668 CENPJQ9HC77 1338 aaPredicted RBP12.25□□□□□ -0.45
SRSF1-207ENST00000584668 CPSF1Q10570 1443 aaKnown RBP12.25□□□□□ -0.45
SRSF1-207ENST00000584668 ABCC6O95255 1503 aa12.25□□□□□ -0.45
SRSF1-207ENST00000584668 PIK3C2AO00443 1686 aa12.25□□□□□ -0.45
SRSF1-207ENST00000584668 NHSQ6T4R5 1651 aa12.25□□□□□ -0.45
SRSF1-207ENST00000584668 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
SRSF1-207ENST00000584668 CSB-PGBD3P0DP91 1061 aa12.24□□□□□ -0.45
SRSF1-207ENST00000584668 KCNH5Q8NCM2 988 aa12.24□□□□□ -0.45
SRSF1-207ENST00000584668 MTFR1LQ9H019 292 aa12.24□□□□□ -0.45
SRSF1-207ENST00000584668 COL18A1P39060 1754 aa12.23□□□□□ -0.45
SRSF1-207ENST00000584668 TRPM1Q7Z4N2 1603 aa12.23□□□□□ -0.45
SRSF1-207ENST00000584668 CCDC7Q96M83 1385 aa12.23□□□□□ -0.45
SRSF1-207ENST00000584668 RGPD5Q99666 1765 aa12.23□□□□□ -0.45
SRSF1-207ENST00000584668 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
SRSF1-207ENST00000584668 EXOC5O00471 708 aa12.22□□□□□ -0.45
SRSF1-207ENST00000584668 SLC15A2Q16348 729 aa12.22□□□□□ -0.45
SRSF1-207ENST00000584668 TXNRD1Q16881 649 aa12.22□□□□□ -0.45
SRSF1-207ENST00000584668 CARD10Q9BWT7 1032 aa12.21□□□□□ -0.45
SRSF1-207ENST00000584668 FHDC1Q9C0D6 1143 aaPredicted RBP12.21□□□□□ -0.45
SRSF1-207ENST00000584668 ATF5Q9Y2D1 282 aaPredicted RBP12.21□□□□□ -0.45
SRSF1-207ENST00000584668 MAP3K5Q99683 1374 aa12.2□□□□□ -0.46
SRSF1-207ENST00000584668 PTGER2P43116 358 aa12.2□□□□□ -0.46
SRSF1-207ENST00000584668 SYT17Q9BSW7 474 aa12.2□□□□□ -0.46
SRSF1-207ENST00000584668 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
SRSF1-207ENST00000584668 EVC2Q86UK5 1308 aa12.19□□□□□ -0.46
SRSF1-207ENST00000584668 TTC21AQ8NDW8 1320 aa12.19□□□□□ -0.46
SRSF1-207ENST00000584668 C1QTNF8P60827 252 aa12.19□□□□□ -0.46
SRSF1-207ENST00000584668 MARCH10Q8NA82 808 aaPredicted RBP12.19□□□□□ -0.46
SRSF1-207ENST00000584668 ARXQ96QS3 562 aa12.19□□□□□ -0.46
SRSF1-207ENST00000584668 QSER1Q2KHR3 1735 aa12.19□□□□□ -0.46
SRSF1-207ENST00000584668 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
SRSF1-207ENST00000584668 BTAF1O14981 1849 aa12.18□□□□□ -0.46
SRSF1-207ENST00000584668 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
SRSF1-207ENST00000584668 CABP1Q9NZU7 370 aa12.18□□□□□ -0.46
SRSF1-207ENST00000584668 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
SRSF1-207ENST00000584668 GIGYF1O75420 1035 aaPredicted RBP12.17□□□□□ -0.46
SRSF1-207ENST00000584668 POLD1P28340 1107 aa12.17□□□□□ -0.46
SRSF1-207ENST00000584668 GPR162Q16538 588 aa12.17□□□□□ -0.46
SRSF1-207ENST00000584668 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
SRSF1-207ENST00000584668 LTN1O94822 1766 aa12.16□□□□□ -0.46
SRSF1-207ENST00000584668 ARHGEF25Q86VW2 580 aa12.16□□□□□ -0.46
SRSF1-207ENST00000584668 PROM2Q8N271 834 aa12.16□□□□□ -0.46
SRSF1-207ENST00000584668 PDGFDQ9GZP0 370 aaPredicted RBP12.16□□□□□ -0.46
SRSF1-207ENST00000584668 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
SRSF1-207ENST00000584668 MON2Q7Z3U7 1717 aa12.15□□□□□ -0.46
SRSF1-207ENST00000584668 SOX12O15370 315 aa12.15□□□□□ -0.46
SRSF1-207ENST00000584668 NFAT5O94916 1531 aa12.15□□□□□ -0.46
SRSF1-207ENST00000584668 USP54Q70EL1 1684 aa12.14□□□□□ -0.47
SRSF1-207ENST00000584668 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
SRSF1-207ENST00000584668 SLC16A10Q8TF71 515 aa12.14□□□□□ -0.47
SRSF1-207ENST00000584668 AXIN2Q9Y2T1 843 aa12.14□□□□□ -0.47
SRSF1-207ENST00000584668 TTC21BQ7Z4L5 1316 aa12.13□□□□□ -0.47
SRSF1-207ENST00000584668 NBPF1Q3BBV0 1214 aa12.13□□□□□ -0.47
SRSF1-207ENST00000584668 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
SRSF1-207ENST00000584668 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
SRSF1-207ENST00000584668 KTN1Q86UP2 1357 aaKnown RBP12.13□□□□□ -0.47
SRSF1-207ENST00000584668 IL2RBP14784 551 aa12.12□□□□□ -0.47
SRSF1-207ENST00000584668 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
SRSF1-207ENST00000584668 ERBB3P21860 1342 aa12.11□□□□□ -0.47
SRSF1-207ENST00000584668 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
SRSF1-207ENST00000584668 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
SRSF1-207ENST00000584668 ACSBG1Q96GR2 724 aa12.11□□□□□ -0.47
SRSF1-207ENST00000584668 NLRP2Q9NX02 1062 aa12.11□□□□□ -0.47
SRSF1-207ENST00000584668 COL24A1Q17RW2 1714 aa12.11□□□□□ -0.47
SRSF1-207ENST00000584668 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
SRSF1-207ENST00000584668 ROCK2O75116 1388 aaKnown RBP12.09□□□□□ -0.47
SRSF1-207ENST00000584668 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
SRSF1-207ENST00000584668 TUBGCP6Q96RT7 1819 aa12.09□□□□□ -0.47
SRSF1-207ENST00000584668 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.48
SRSF1-207ENST00000584668 SHANK3Q9BYB0 1731 aa12.08□□□□□ -0.48
SRSF1-207ENST00000584668 CEP350Q5VT06 3117 aa12.08□□□□□ -0.48
SRSF1-207ENST00000584668 LY75O60449 1722 aa12.07□□□□□ -0.48
SRSF1-207ENST00000584668 ZNF827Q17R98 1081 aa12.07□□□□□ -0.48
SRSF1-207ENST00000584668 TFCP2L1Q9NZI6 479 aa12.07□□□□□ -0.48
SRSF1-207ENST00000584668 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
SRSF1-207ENST00000584668 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
SRSF1-207ENST00000584668 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
SRSF1-207ENST00000584668 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.05□□□□□ -0.48
SRSF1-207ENST00000584668 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
SRSF1-207ENST00000584668 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
SRSF1-207ENST00000584668 PNPLA7Q6ZV29 1317 aa12.04□□□□□ -0.48
SRSF1-207ENST00000584668 ANKRD36BQ8N2N9 1353 aa12.04□□□□□ -0.48
SRSF1-207ENST00000584668 SBNO2Q9Y2G9 1366 aa12.04□□□□□ -0.48
SRSF1-207ENST00000584668 EDC4Q6P2E9 1401 aaKnown RBP12.03□□□□□ -0.48
SRSF1-207ENST00000584668 MSH5O43196 834 aa12.03□□□□□ -0.48
SRSF1-207ENST00000584668 LRRC4BQ9NT99 713 aa12.03□□□□□ -0.48
SRSF1-207ENST00000584668 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
SRSF1-207ENST00000584668 TERF2IPQ9NYB0 399 aa12.02□□□□□ -0.49
SRSF1-207ENST00000584668 C5P01031 1676 aa12.02□□□□□ -0.49
SRSF1-207ENST00000584668 USP47Q96K76 1375 aa12.02□□□□□ -0.49
SRSF1-207ENST00000584668 TMC1Q8TDI8 760 aa12.01□□□□□ -0.49
SRSF1-207ENST00000584668 GPBP1L1Q9HC44 474 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms