RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 KIAA0232Q92628 1395 aa9.5□□□□□ -0.89
CTC1-212ENST00000584439 LMO7Q8WWI1 1683 aa9.49□□□□□ -0.89
CTC1-212ENST00000584439 COL13A1Q5TAT6 717 aaPredicted RBP9.49□□□□□ -0.89
CTC1-212ENST00000584439 SAMD1Q6SPF0 538 aaPredicted RBP9.49□□□□□ -0.89
CTC1-212ENST00000584439 BCL11BQ9C0K0 894 aaPredicted RBP9.49□□□□□ -0.89
CTC1-212ENST00000584439 PRDM11Q9NQV5 511 aa9.49□□□□□ -0.89
CTC1-212ENST00000584439 RGPD5Q99666 1765 aa9.48□□□□□ -0.89
CTC1-212ENST00000584439 PLSCR1O15162 318 aa9.48□□□□□ -0.89
CTC1-212ENST00000584439 LARP1Q6PKG0 1096 aaKnown RBP9.48□□□□□ -0.89
CTC1-212ENST00000584439 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
CTC1-212ENST00000584439 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
CTC1-212ENST00000584439 TOPAZ1Q8N9V7 1692 aa9.48□□□□□ -0.89
CTC1-212ENST00000584439 SSH2Q76I76 1423 aa9.48□□□□□ -0.89
CTC1-212ENST00000584439 PAPPAQ13219 1627 aa9.47□□□□□ -0.89
CTC1-212ENST00000584439 BARGINQ6ZT62 677 aa9.47□□□□□ -0.89
CTC1-212ENST00000584439 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
CTC1-212ENST00000584439 ABCC11Q96J66 1382 aa9.47□□□□□ -0.89
CTC1-212ENST00000584439 ATP10DQ9P241 1426 aa9.47□□□□□ -0.89
CTC1-212ENST00000584439 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.9
CTC1-212ENST00000584439 MKRN4PQ13434 485 aaPredicted RBP9.46□□□□□ -0.9
CTC1-212ENST00000584439 SAFB2Q14151 953 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTC1-212ENST00000584439 SLC15A2Q16348 729 aa9.46□□□□□ -0.9
CTC1-212ENST00000584439 MTFR1LQ9H019 292 aa9.46□□□□□ -0.9
CTC1-212ENST00000584439 YBX3P16989 372 aaKnown RBP eCLIP9.45□□□□□ -0.9
CTC1-212ENST00000584439 NLGN2Q8NFZ4 835 aa9.45□□□□□ -0.9
CTC1-212ENST00000584439 MAP3K5Q99683 1374 aa9.45□□□□□ -0.9
CTC1-212ENST00000584439 YTHDC2Q9H6S0 1430 aaKnown RBP9.45□□□□□ -0.9
CTC1-212ENST00000584439 QSER1Q2KHR3 1735 aa9.45□□□□□ -0.9
CTC1-212ENST00000584439 WDR90Q96KV7 1748 aa9.45□□□□□ -0.9
CTC1-212ENST00000584439 SLC34A2O95436 690 aa9.44□□□□□ -0.9
CTC1-212ENST00000584439 DNAJC5GQ8N7S2 189 aa9.44□□□□□ -0.9
CTC1-212ENST00000584439 ZNF526Q8TF50 670 aaPredicted RBP9.44□□□□□ -0.9
CTC1-212ENST00000584439 ROCK1Q13464 1354 aa9.44□□□□□ -0.9
CTC1-212ENST00000584439 OVOS2A0A0G2JMS6 1433 aa9.44□□□□□ -0.9
CTC1-212ENST00000584439 OVOS2A0A0J9YW53 1432 aa9.44□□□□□ -0.9
CTC1-212ENST00000584439 OVOS2Q6IE36 1432 aa9.44□□□□□ -0.9
CTC1-212ENST00000584439 ATP7BP35670 1465 aa9.44□□□□□ -0.9
CTC1-212ENST00000584439 BTAF1O14981 1849 aa9.43□□□□□ -0.9
CTC1-212ENST00000584439 RPGRIP1LQ68CZ1 1315 aa9.43□□□□□ -0.9
CTC1-212ENST00000584439 PRR36Q9H6K5 1346 aa9.43□□□□□ -0.9
CTC1-212ENST00000584439 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
CTC1-212ENST00000584439 TXNRD1Q16881 649 aa9.43□□□□□ -0.9
CTC1-212ENST00000584439 NUTM2GQ5VZR2 741 aa9.43□□□□□ -0.9
CTC1-212ENST00000584439 TCP11L2Q8N4U5 519 aa9.43□□□□□ -0.9
CTC1-212ENST00000584439 STK32BQ9NY57 414 aa9.43□□□□□ -0.9
CTC1-212ENST00000584439 PAK3O75914 559 aaPredicted RBP9.42□□□□□ -0.9
CTC1-212ENST00000584439 EVA1CP58658 441 aa9.42□□□□□ -0.9
CTC1-212ENST00000584439 ITGAEP38570 1179 aa9.41□□□□□ -0.9
CTC1-212ENST00000584439 PRELPP51888 382 aa9.41□□□□□ -0.9
CTC1-212ENST00000584439 NPM2Q86SE8 214 aaKnown RBP9.41□□□□□ -0.9
CTC1-212ENST00000584439 ITSN1Q15811 1721 aa9.41□□□□□ -0.9
CTC1-212ENST00000584439 NHSQ6T4R5 1651 aa9.4□□□□□ -0.9
CTC1-212ENST00000584439 TRIM26Q12899 539 aaPredicted RBP9.4□□□□□ -0.9
CTC1-212ENST00000584439 MARCH10Q8NA82 808 aaPredicted RBP9.4□□□□□ -0.9
CTC1-212ENST00000584439 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
CTC1-212ENST00000584439 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
CTC1-212ENST00000584439 COL18A1P39060 1754 aa9.4□□□□□ -0.91
CTC1-212ENST00000584439 ANKARQ7Z5J8 1434 aa9.39□□□□□ -0.91
CTC1-212ENST00000584439 GPRASP1Q5JY77 1395 aa9.39□□□□□ -0.91
CTC1-212ENST00000584439 ZNF827Q17R98 1081 aa9.39□□□□□ -0.91
CTC1-212ENST00000584439 PRAM1Q96QH2 718 aa9.39□□□□□ -0.91
CTC1-212ENST00000584439 COL5A2P05997 1499 aaPredicted RBP9.39□□□□□ -0.91
CTC1-212ENST00000584439 ARHGEF28Q8N1W1 1705 aaKnown RBP9.39□□□□□ -0.91
CTC1-212ENST00000584439 PIK3C2GO75747 1445 aa9.39□□□□□ -0.91
CTC1-212ENST00000584439 ADCY9O60503 1353 aa9.38□□□□□ -0.91
CTC1-212ENST00000584439 HTRA3P83110 453 aa9.38□□□□□ -0.91
CTC1-212ENST00000584439 RGL3Q3MIN7 710 aa9.38□□□□□ -0.91
CTC1-212ENST00000584439 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
CTC1-212ENST00000584439 KIF3CO14782 793 aa9.37□□□□□ -0.91
CTC1-212ENST00000584439 APLP2Q06481 763 aa9.37□□□□□ -0.91
CTC1-212ENST00000584439 TNS4Q8IZW8 715 aa9.37□□□□□ -0.91
CTC1-212ENST00000584439 SIRT1Q96EB6 747 aa9.37□□□□□ -0.91
CTC1-212ENST00000584439 TULP4Q9NRJ4 1543 aa9.36□□□□□ -0.91
CTC1-212ENST00000584439 THRAP3Q9Y2W1 955 aaKnown RBP9.36□□□□□ -0.91
CTC1-212ENST00000584439 CRB1P82279 1406 aa9.35□□□□□ -0.91
CTC1-212ENST00000584439 DDB1Q16531 1140 aa9.35□□□□□ -0.91
CTC1-212ENST00000584439 SPATA31E1Q6ZUB1 1445 aa9.35□□□□□ -0.91
CTC1-212ENST00000584439 NGDNQ8NEJ9 315 aaKnown RBP9.35□□□□□ -0.91
CTC1-212ENST00000584439 MINK1Q8N4C8 1332 aaPredicted RBP9.34□□□□□ -0.91
CTC1-212ENST00000584439 APLP1P51693 650 aa9.34□□□□□ -0.91
CTC1-212ENST00000584439 CFAP70Q5T0N1 1121 aa9.34□□□□□ -0.91
CTC1-212ENST00000584439 LRRC4BQ9NT99 713 aa9.34□□□□□ -0.91
CTC1-212ENST00000584439 AATKQ6ZMQ8 1374 aa9.34□□□□□ -0.91
CTC1-212ENST00000584439 BRPF1P55201 1214 aaPredicted RBP9.33□□□□□ -0.92
CTC1-212ENST00000584439 POTEHQ6S545 545 aa9.33□□□□□ -0.92
CTC1-212ENST00000584439 BCL9O00512 1426 aa9.32□□□□□ -0.92
CTC1-212ENST00000584439 C11orf95C9JLR9 678 aaPredicted RBP9.32□□□□□ -0.92
CTC1-212ENST00000584439 GRIN3BO60391 1043 aa9.32□□□□□ -0.92
CTC1-212ENST00000584439 ACSBG1Q96GR2 724 aa9.32□□□□□ -0.92
CTC1-212ENST00000584439 C14orf93Q9H972 538 aaKnown RBP9.32□□□□□ -0.92
CTC1-212ENST00000584439 CPDO75976 1380 aa9.32□□□□□ -0.92
CTC1-212ENST00000584439 PNPLA7Q6ZV29 1317 aa9.31□□□□□ -0.92
CTC1-212ENST00000584439 LY75O60449 1722 aa9.31□□□□□ -0.92
CTC1-212ENST00000584439 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
CTC1-212ENST00000584439 ABCB7O75027 752 aa9.31□□□□□ -0.92
CTC1-212ENST00000584439 POGKQ9P215 609 aa9.31□□□□□ -0.92
CTC1-212ENST00000584439 WWC3Q9ULE0 1092 aa9.31□□□□□ -0.92
CTC1-212ENST00000584439 ANKRD30BQ9BXX2 1392 aa9.3□□□□□ -0.92
CTC1-212ENST00000584439 KCNQ4P56696 695 aa9.3□□□□□ -0.92
CTC1-212ENST00000584439 JMYQ8N9B5 988 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms