RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 POTECB2RU33 542 aa9.96□□□□□ -0.82
NF1-223ENST00000584328 DZIP3Q86Y13 1208 aaKnown RBP9.96□□□□□ -0.82
NF1-223ENST00000584328 ATP13A2Q9NQ11 1180 aa9.96□□□□□ -0.82
NF1-223ENST00000584328 GPR37L1O60883 481 aa9.95□□□□□ -0.82
NF1-223ENST00000584328 FBXO45P0C2W1 286 aa9.95□□□□□ -0.82
NF1-223ENST00000584328 TIMP2P16035 220 aa9.95□□□□□ -0.82
NF1-223ENST00000584328 KCTD15Q96SI1 283 aaPredicted RBP9.95□□□□□ -0.82
NF1-223ENST00000584328 KLF16Q9BXK1 252 aaPredicted RBP9.95□□□□□ -0.82
NF1-223ENST00000584328 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
NF1-223ENST00000584328 ZIC2O95409 532 aaPredicted RBP9.94□□□□□ -0.82
NF1-223ENST00000584328 PRM3Q9NNZ6 103 aa9.94□□□□□ -0.82
NF1-223ENST00000584328 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
NF1-223ENST00000584328 NBPF20Q3BBV1 942 aa9.93□□□□□ -0.82
NF1-223ENST00000584328 CCDC116Q8IYX3 515 aa9.93□□□□□ -0.82
NF1-223ENST00000584328 ITPKCQ96DU7 683 aa9.93□□□□□ -0.82
NF1-223ENST00000584328 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
NF1-223ENST00000584328 BMP1P13497 986 aa9.92□□□□□ -0.82
NF1-223ENST00000584328 NR1H3Q13133 447 aa9.92□□□□□ -0.82
NF1-223ENST00000584328 MCM6Q14566 821 aa9.92□□□□□ -0.82
NF1-223ENST00000584328 PCDHB9Q9Y5E1 797 aa9.92□□□□□ -0.82
NF1-223ENST00000584328 EMILIN1Q9Y6C2 1016 aa9.91□□□□□ -0.82
NF1-223ENST00000584328 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.82
NF1-223ENST00000584328 INTS6LQ5JSJ4 861 aaKnown RBP9.9□□□□□ -0.82
NF1-223ENST00000584328 PPP1R26Q5T8A7 1209 aaPredicted RBP9.9□□□□□ -0.82
NF1-223ENST00000584328 TRIM46Q7Z4K8 759 aa9.9□□□□□ -0.82
NF1-223ENST00000584328 RAB15P59190 212 aa9.89□□□□□ -0.83
NF1-223ENST00000584328 DHX9Q08211 1270 aaKnown RBP9.89□□□□□ -0.83
NF1-223ENST00000584328 SENP2Q9HC62 589 aa9.89□□□□□ -0.83
NF1-223ENST00000584328 GDPD2Q9HCC8 539 aa9.89□□□□□ -0.83
NF1-223ENST00000584328 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
NF1-223ENST00000584328 ZNF330Q9Y3S2 320 aaPredicted RBP9.88□□□□□ -0.83
NF1-223ENST00000584328 MRPL14Q6P1L8 145 aaKnown RBP9.87□□□□□ -0.83
NF1-223ENST00000584328 TRIM47Q96LD4 638 aa9.87□□□□□ -0.83
NF1-223ENST00000584328 ESPNB1AK53 854 aa9.86□□□□□ -0.83
NF1-223ENST00000584328 ABL2P42684 1182 aa9.86□□□□□ -0.83
NF1-223ENST00000584328 IRF5Q13568 498 aa9.86□□□□□ -0.83
NF1-223ENST00000584328 KIFC2Q96AC6 838 aa9.86□□□□□ -0.83
NF1-223ENST00000584328 GIGYF1O75420 1035 aaPredicted RBP9.85□□□□□ -0.83
NF1-223ENST00000584328 MCCD1P59942 119 aaPredicted RBP9.85□□□□□ -0.83
NF1-223ENST00000584328 SCARF1Q14162 830 aa9.85□□□□□ -0.83
NF1-223ENST00000584328 ZNF592Q92610 1267 aa9.85□□□□□ -0.83
NF1-223ENST00000584328 ERVH48-1M5A8F1 160 aa9.84□□□□□ -0.83
NF1-223ENST00000584328 SNRPBP14678 240 aaKnown RBP9.84□□□□□ -0.83
NF1-223ENST00000584328 FLIIQ13045 1269 aa9.84□□□□□ -0.83
NF1-223ENST00000584328 SEPT12Q8IYM1 358 aa9.84□□□□□ -0.83
NF1-223ENST00000584328 MEIOBQ8N635 442 aa9.84□□□□□ -0.83
NF1-223ENST00000584328 ZFP42Q96MM3 310 aa9.84□□□□□ -0.83
NF1-223ENST00000584328 PURBQ96QR8 312 aaKnown RBP9.84□□□□□ -0.83
NF1-223ENST00000584328 TMPRSS4Q9NRS4 437 aa9.84□□□□□ -0.83
NF1-223ENST00000584328 CBLBQ13191 982 aa9.83□□□□□ -0.84
NF1-223ENST00000584328 COG6Q9Y2V7 657 aa9.83□□□□□ -0.84
NF1-223ENST00000584328 UPP2O95045 317 aa9.82□□□□□ -0.84
NF1-223ENST00000584328 C6orf118Q5T5N4 469 aa9.82□□□□□ -0.84
NF1-223ENST00000584328 VAC14Q08AM6 782 aa9.81□□□□□ -0.84
NF1-223ENST00000584328 LINC00528Q8N1L1 170 aa9.81□□□□□ -0.84
NF1-223ENST00000584328 ZNF784Q8NCA9 323 aaPredicted RBP9.81□□□□□ -0.84
NF1-223ENST00000584328 BMP2P12643 396 aa9.8□□□□□ -0.84
NF1-223ENST00000584328 EIF4G2P78344 907 aaKnown RBP eCLIP9.8□□□□□ -0.84
NF1-223ENST00000584328 RNF20Q5VTR2 975 aa9.8□□□□□ -0.84
NF1-223ENST00000584328 Q6ZVU0 165 aa9.8□□□□□ -0.84
NF1-223ENST00000584328 TSEN34Q9BSV6 310 aaKnown RBP9.8□□□□□ -0.84
NF1-223ENST00000584328 UBTFP17480 764 aaKnown RBP9.79□□□□□ -0.84
NF1-223ENST00000584328 WASHC4Q2M389 1173 aa9.79□□□□□ -0.84
NF1-223ENST00000584328 ZNF775Q96BV0 537 aaPredicted RBP9.79□□□□□ -0.84
NF1-223ENST00000584328 POM121Q96HA1 1249 aa9.79□□□□□ -0.84
NF1-223ENST00000584328 RAD21O60216 631 aa9.78□□□□□ -0.84
NF1-223ENST00000584328 LILRA1O75019 489 aa9.77□□□□□ -0.85
NF1-223ENST00000584328 CCDC125Q86Z20 511 aa9.77□□□□□ -0.85
NF1-223ENST00000584328 AGBL1Q96MI9 1066 aa9.77□□□□□ -0.85
NF1-223ENST00000584328 CYLDQ9NQC7 956 aa9.77□□□□□ -0.85
NF1-223ENST00000584328 CEP126Q9P2H0 1117 aa9.77□□□□□ -0.85
NF1-223ENST00000584328 ADD1P35611 737 aaKnown RBP9.76□□□□□ -0.85
NF1-223ENST00000584328 TRIM52Q96A61 297 aa9.76□□□□□ -0.85
NF1-223ENST00000584328 RELBQ01201 579 aa9.75□□□□□ -0.85
NF1-223ENST00000584328 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
NF1-223ENST00000584328 PCDHB11Q9Y5F2 797 aa9.75□□□□□ -0.85
NF1-223ENST00000584328 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
NF1-223ENST00000584328 ADH1AP07327 375 aa9.74□□□□□ -0.85
NF1-223ENST00000584328 SOBPA7XYQ1 873 aa9.73□□□□□ -0.85
NF1-223ENST00000584328 UNC13AQ9UPW8 1703 aa9.73□□□□□ -0.85
NF1-223ENST00000584328 SPINT1O43278 529 aa9.72□□□□□ -0.85
NF1-223ENST00000584328 MAN1A2O60476 641 aa9.72□□□□□ -0.85
NF1-223ENST00000584328 SEMA3FQ13275 785 aa9.72□□□□□ -0.85
NF1-223ENST00000584328 ZNF395Q9H8N7 513 aaPredicted RBP9.72□□□□□ -0.85
NF1-223ENST00000584328 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
NF1-223ENST00000584328 SOX11P35716 441 aa9.71□□□□□ -0.86
NF1-223ENST00000584328 ERVK-9P63128 1117 aa9.71□□□□□ -0.86
NF1-223ENST00000584328 SLFNL1Q499Z3 407 aa9.71□□□□□ -0.86
NF1-223ENST00000584328 CC2D2BQ6DHV5 1058 aa9.71□□□□□ -0.86
NF1-223ENST00000584328 CCDC85AQ96PX6 553 aaPredicted RBP9.71□□□□□ -0.86
NF1-223ENST00000584328 SCRIBQ14160 1630 aa9.71□□□□□ -0.86
NF1-223ENST00000584328 TTLL8A6PVC2 850 aa9.7□□□□□ -0.86
NF1-223ENST00000584328 PTGIRP43119 386 aa9.7□□□□□ -0.86
NF1-223ENST00000584328 SCTRP47872 440 aa9.7□□□□□ -0.86
NF1-223ENST00000584328 KDF1Q8NAX2 398 aaPredicted RBP9.7□□□□□ -0.86
NF1-223ENST00000584328 SHROOM4Q9ULL8 1493 aa9.7□□□□□ -0.86
NF1-223ENST00000584328 RNF135Q8IUD6 432 aa9.69□□□□□ -0.86
NF1-223ENST00000584328 PHTF2Q8N3S3 785 aa9.69□□□□□ -0.86
NF1-223ENST00000584328 CLUAP1Q96AJ1 413 aa9.69□□□□□ -0.86
NF1-223ENST00000584328 INSM2Q96T92 566 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms