RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 PER1O15534 1290 aaPredicted RBP11.35□□□□□ -0.59
ERBB2-216ENST00000584014 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
ERBB2-216ENST00000584014 USP35Q9P2H5 1018 aa11.34□□□□□ -0.59
ERBB2-216ENST00000584014 OVOS2A0A0J9YW53 1432 aa11.34□□□□□ -0.59
ERBB2-216ENST00000584014 OVOS2Q6IE36 1432 aa11.34□□□□□ -0.59
ERBB2-216ENST00000584014 LTN1O94822 1766 aa11.33□□□□□ -0.59
ERBB2-216ENST00000584014 A0A0G2JS52 829 aa11.33□□□□□ -0.6
ERBB2-216ENST00000584014 KCNA4P22459 653 aa11.33□□□□□ -0.6
ERBB2-216ENST00000584014 ARHGEF25Q86VW2 580 aa11.33□□□□□ -0.6
ERBB2-216ENST00000584014 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
ERBB2-216ENST00000584014 SLIT3O75094 1523 aa11.33□□□□□ -0.6
ERBB2-216ENST00000584014 COL14A1Q05707 1796 aaKnown RBP11.32□□□□□ -0.6
ERBB2-216ENST00000584014 ZNF772Q68DY9 489 aaPredicted RBP11.32□□□□□ -0.6
ERBB2-216ENST00000584014 EMILIN1Q9Y6C2 1016 aa11.32□□□□□ -0.6
ERBB2-216ENST00000584014 PLCH1Q4KWH8 1693 aa11.32□□□□□ -0.6
ERBB2-216ENST00000584014 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
ERBB2-216ENST00000584014 ANKRD26Q9UPS8 1709 aa11.32□□□□□ -0.6
ERBB2-216ENST00000584014 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
ERBB2-216ENST00000584014 NSD2O96028 1365 aa11.31□□□□□ -0.6
ERBB2-216ENST00000584014 MAP2P11137 1827 aaKnown RBP11.31□□□□□ -0.6
ERBB2-216ENST00000584014 UNC5CLQ8IV45 518 aa11.31□□□□□ -0.6
ERBB2-216ENST00000584014 AXIN2Q9Y2T1 843 aa11.31□□□□□ -0.6
ERBB2-216ENST00000584014 NFAT5O94916 1531 aa11.3□□□□□ -0.6
ERBB2-216ENST00000584014 TOM1L2Q6ZVM7 507 aa11.3□□□□□ -0.6
ERBB2-216ENST00000584014 FNBP4Q8N3X1 1017 aaPredicted RBP11.3□□□□□ -0.6
ERBB2-216ENST00000584014 CPDO75976 1380 aa11.29□□□□□ -0.6
ERBB2-216ENST00000584014 HOXC9P31274 260 aa11.29□□□□□ -0.6
ERBB2-216ENST00000584014 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
ERBB2-216ENST00000584014 HSP90AB2PQ58FF8 381 aa11.29□□□□□ -0.6
ERBB2-216ENST00000584014 LARP1Q6PKG0 1096 aaKnown RBP11.29□□□□□ -0.6
ERBB2-216ENST00000584014 POTEAQ6S8J7 498 aa11.29□□□□□ -0.6
ERBB2-216ENST00000584014 ANKRD24Q8TF21 1146 aa11.29□□□□□ -0.6
ERBB2-216ENST00000584014 IP6K1Q92551 441 aa11.29□□□□□ -0.6
ERBB2-216ENST00000584014 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
ERBB2-216ENST00000584014 RGS17Q9UGC6 210 aaPredicted RBP11.29□□□□□ -0.6
ERBB2-216ENST00000584014 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
ERBB2-216ENST00000584014 USP54Q70EL1 1684 aa11.29□□□□□ -0.6
ERBB2-216ENST00000584014 AATKQ6ZMQ8 1374 aa11.28□□□□□ -0.6
ERBB2-216ENST00000584014 CAMTA1Q9Y6Y1 1673 aa11.28□□□□□ -0.6
ERBB2-216ENST00000584014 MTHFSP49914 203 aa11.28□□□□□ -0.6
ERBB2-216ENST00000584014 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
ERBB2-216ENST00000584014 BCL9LQ86UU0 1499 aa11.27□□□□□ -0.6
ERBB2-216ENST00000584014 RXRBP28702 533 aa11.27□□□□□ -0.61
ERBB2-216ENST00000584014 NWD2Q9ULI1 1742 aa11.26□□□□□ -0.61
ERBB2-216ENST00000584014 SLIT2O94813 1529 aa11.26□□□□□ -0.61
ERBB2-216ENST00000584014 ANP32CO43423 234 aa11.26□□□□□ -0.61
ERBB2-216ENST00000584014 FAM98CQ17RN3 349 aaKnown RBP11.26□□□□□ -0.61
ERBB2-216ENST00000584014 USHBP1Q8N6Y0 703 aa11.26□□□□□ -0.61
ERBB2-216ENST00000584014 GJD4Q96KN9 370 aaPredicted RBP11.26□□□□□ -0.61
ERBB2-216ENST00000584014 COL18A1P39060 1754 aa11.26□□□□□ -0.61
ERBB2-216ENST00000584014 PPP2R1AP30153 589 aa11.25□□□□□ -0.61
ERBB2-216ENST00000584014 VPS72Q15906 364 aa11.25□□□□□ -0.61
ERBB2-216ENST00000584014 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
ERBB2-216ENST00000584014 FLT4P35916 1363 aa11.25□□□□□ -0.61
ERBB2-216ENST00000584014 COL5A2P05997 1499 aaPredicted RBP11.25□□□□□ -0.61
ERBB2-216ENST00000584014 LMO7Q8WWI1 1683 aa11.24□□□□□ -0.61
ERBB2-216ENST00000584014 NRAPQ86VF7 1730 aa11.24□□□□□ -0.61
ERBB2-216ENST00000584014 NPM3O75607 178 aaKnown RBP11.24□□□□□ -0.61
ERBB2-216ENST00000584014 RBM6P78332 1123 aaKnown RBP11.24□□□□□ -0.61
ERBB2-216ENST00000584014 RALBP1Q15311 655 aa11.24□□□□□ -0.61
ERBB2-216ENST00000584014 CFAP53Q96M91 514 aa11.24□□□□□ -0.61
ERBB2-216ENST00000584014 WDR17Q8IZU2 1322 aa11.24□□□□□ -0.61
ERBB2-216ENST00000584014 NPC1L1Q9UHC9 1359 aa11.24□□□□□ -0.61
ERBB2-216ENST00000584014 SMG6Q86US8 1419 aaKnown RBP11.24□□□□□ -0.61
ERBB2-216ENST00000584014 RGPD2P0DJD1 1756 aa11.23□□□□□ -0.61
ERBB2-216ENST00000584014 U2SURPO15042 1029 aaKnown RBP11.23□□□□□ -0.61
ERBB2-216ENST00000584014 BLMP54132 1417 aaPredicted RBP11.23□□□□□ -0.61
ERBB2-216ENST00000584014 RTL1A6NKG5 1358 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 ATRNO75882 1429 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 INSRP06213 1382 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 ERBB3P21860 1342 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 CRB1P82279 1406 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 EIF4A2Q14240 407 aaKnown RBP11.22□□□□□ -0.61
ERBB2-216ENST00000584014 SPATA31A1Q5TZJ5 1347 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 NBPF6Q5VWK0 638 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 TCP11L2Q8N4U5 519 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 NBPF4Q96M43 638 aa11.22□□□□□ -0.61
ERBB2-216ENST00000584014 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.22□□□□□ -0.61
ERBB2-216ENST00000584014 DIAPH1O60610 1272 aaKnown RBP11.21□□□□□ -0.61
ERBB2-216ENST00000584014 CARD10Q9BWT7 1032 aa11.21□□□□□ -0.61
ERBB2-216ENST00000584014 PRKRIP1Q9H875 184 aaPredicted RBP11.21□□□□□ -0.61
ERBB2-216ENST00000584014 PARD3Q8TEW0 1356 aa11.2□□□□□ -0.62
ERBB2-216ENST00000584014 DIEXFQ68CQ4 756 aaKnown RBP11.2□□□□□ -0.62
ERBB2-216ENST00000584014 SEPT12Q8IYM1 358 aa11.2□□□□□ -0.62
ERBB2-216ENST00000584014 GLI3P10071 1580 aa11.2□□□□□ -0.62
ERBB2-216ENST00000584014 KIF24Q5T7B8 1368 aa11.19□□□□□ -0.62
ERBB2-216ENST00000584014 MYBBP1AQ9BQG0 1328 aaKnown RBP11.19□□□□□ -0.62
ERBB2-216ENST00000584014 HMOX1P09601 288 aa11.19□□□□□ -0.62
ERBB2-216ENST00000584014 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
ERBB2-216ENST00000584014 EYA1Q99502 592 aa11.19□□□□□ -0.62
ERBB2-216ENST00000584014 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
ERBB2-216ENST00000584014 IL2RBP14784 551 aa11.18□□□□□ -0.62
ERBB2-216ENST00000584014 PDE3BQ13370 1112 aa11.18□□□□□ -0.62
ERBB2-216ENST00000584014 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
ERBB2-216ENST00000584014 SULT6B1Q6IMI4 303 aa11.18□□□□□ -0.62
ERBB2-216ENST00000584014 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
ERBB2-216ENST00000584014 ABCC6O95255 1503 aa11.18□□□□□ -0.62
ERBB2-216ENST00000584014 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms