RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 IP6K1Q92551 441 aa15.71■□□□□ 0.11
CDRT1-207ENST00000583965 PRDM11Q9NQV5 511 aa15.71■□□□□ 0.11
CDRT1-207ENST00000583965 LRP6O75581 1613 aa15.71■□□□□ 0.11
CDRT1-207ENST00000583965 INSRP06213 1382 aa15.71■□□□□ 0.11
CDRT1-207ENST00000583965 HOXC9P31274 260 aa15.7■□□□□ 0.1
CDRT1-207ENST00000583965 CFAP53Q96M91 514 aa15.7■□□□□ 0.1
CDRT1-207ENST00000583965 NRAPQ86VF7 1730 aa15.7■□□□□ 0.1
CDRT1-207ENST00000583965 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.7■□□□□ 0.1
CDRT1-207ENST00000583965 RGPD2P0DJD1 1756 aa15.7■□□□□ 0.1
CDRT1-207ENST00000583965 PPM1GO15355 546 aaPredicted RBP15.69■□□□□ 0.1
CDRT1-207ENST00000583965 CAMTA1Q9Y6Y1 1673 aa15.68■□□□□ 0.1
CDRT1-207ENST00000583965 COL3A1P02461 1466 aaPredicted RBP15.68■□□□□ 0.1
CDRT1-207ENST00000583965 ZBTB7CA1YPR0 619 aa15.68■□□□□ 0.1
CDRT1-207ENST00000583965 ADAMTS2O95450 1211 aa15.68■□□□□ 0.1
CDRT1-207ENST00000583965 FAM83GA6ND36 823 aa15.67■□□□□ 0.1
CDRT1-207ENST00000583965 CCER2I3L3R5 266 aa15.67■□□□□ 0.1
CDRT1-207ENST00000583965 CHRNA2Q15822 529 aa15.67■□□□□ 0.1
CDRT1-207ENST00000583965 MIER1Q8N108 512 aa15.67■□□□□ 0.1
CDRT1-207ENST00000583965 RGPD1P0DJD0 1748 aa15.66■□□□□ 0.1
CDRT1-207ENST00000583965 SLIT2O94813 1529 aa15.66■□□□□ 0.1
CDRT1-207ENST00000583965 HSP90AB2PQ58FF8 381 aa15.65■□□□□ 0.1
CDRT1-207ENST00000583965 MEX3CQ5U5Q3 659 aaKnown RBP15.65■□□□□ 0.1
CDRT1-207ENST00000583965 COL5A2P05997 1499 aaPredicted RBP15.65■□□□□ 0.1
CDRT1-207ENST00000583965 AXIN2Q9Y2T1 843 aa15.64■□□□□ 0.09
CDRT1-207ENST00000583965 DIAPH1O60610 1272 aaKnown RBP15.63■□□□□ 0.09
CDRT1-207ENST00000583965 ILDR1Q86SU0 546 aaPredicted RBP15.63■□□□□ 0.09
CDRT1-207ENST00000583965 ERBB3P21860 1342 aa15.63■□□□□ 0.09
CDRT1-207ENST00000583965 EIF4A2Q14240 407 aaKnown RBP15.62■□□□□ 0.09
CDRT1-207ENST00000583965 FNBP4Q8N3X1 1017 aaPredicted RBP15.62■□□□□ 0.09
CDRT1-207ENST00000583965 ANKRD24Q8TF21 1146 aa15.62■□□□□ 0.09
CDRT1-207ENST00000583965 NGLY1Q96IV0 654 aa15.62■□□□□ 0.09
CDRT1-207ENST00000583965 C8orf37Q96NL8 207 aa15.62■□□□□ 0.09
CDRT1-207ENST00000583965 MRS2Q9HD23 443 aa15.62■□□□□ 0.09
CDRT1-207ENST00000583965 BTG4Q9NY30 223 aa15.62■□□□□ 0.09
CDRT1-207ENST00000583965 NUDCQ9Y266 331 aa15.62■□□□□ 0.09
CDRT1-207ENST00000583965 WNK3Q9BYP7 1800 aa15.61■□□□□ 0.09
CDRT1-207ENST00000583965 IL13P35225 146 aa15.61■□□□□ 0.09
CDRT1-207ENST00000583965 EVA1CP58658 441 aa15.6■□□□□ 0.09
CDRT1-207ENST00000583965 WDR17Q8IZU2 1322 aa15.6■□□□□ 0.09
CDRT1-207ENST00000583965 CCDC184Q52MB2 194 aa15.59■□□□□ 0.09
CDRT1-207ENST00000583965 LTV1Q96GA3 475 aaPredicted RBP15.59■□□□□ 0.09
CDRT1-207ENST00000583965 BCL9LQ86UU0 1499 aa15.59■□□□□ 0.09
CDRT1-207ENST00000583965 CSB-PGBD3P0DP91 1061 aa15.58■□□□□ 0.08
CDRT1-207ENST00000583965 UNC5CLQ8IV45 518 aa15.58■□□□□ 0.08
CDRT1-207ENST00000583965 AFF2P51816 1311 aa15.58■□□□□ 0.08
CDRT1-207ENST00000583965 CRB1P82279 1406 aa15.58■□□□□ 0.08
CDRT1-207ENST00000583965 NCAPD2Q15021 1401 aa15.58■□□□□ 0.08
CDRT1-207ENST00000583965 PARP4Q9UKK3 1724 aaKnown RBP15.57■□□□□ 0.08
CDRT1-207ENST00000583965 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
CDRT1-207ENST00000583965 STRN4Q9NRL3 753 aa15.57■□□□□ 0.08
CDRT1-207ENST00000583965 IGSF1Q8N6C5 1336 aa15.57■□□□□ 0.08
CDRT1-207ENST00000583965 EYA1Q99502 592 aa15.56■□□□□ 0.08
CDRT1-207ENST00000583965 USP21Q9UK80 565 aa15.56■□□□□ 0.08
CDRT1-207ENST00000583965 KDRP35968 1356 aa15.55■□□□□ 0.08
CDRT1-207ENST00000583965 U2SURPO15042 1029 aaKnown RBP15.55■□□□□ 0.08
CDRT1-207ENST00000583965 NBPF6Q5VWK0 638 aa15.55■□□□□ 0.08
CDRT1-207ENST00000583965 LARP1Q6PKG0 1096 aaKnown RBP15.55■□□□□ 0.08
CDRT1-207ENST00000583965 TOM1L2Q6ZVM7 507 aa15.55■□□□□ 0.08
CDRT1-207ENST00000583965 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
CDRT1-207ENST00000583965 NBPF4Q96M43 638 aa15.55■□□□□ 0.08
CDRT1-207ENST00000583965 CARD10Q9BWT7 1032 aa15.55■□□□□ 0.08
CDRT1-207ENST00000583965 NLRP2Q9NX02 1062 aa15.55■□□□□ 0.08
CDRT1-207ENST00000583965 U2AF1L5P0DN76 240 aaPredicted RBP15.54■□□□□ 0.08
CDRT1-207ENST00000583965 U2AF1Q01081 240 aaKnown RBP eCLIP15.54■□□□□ 0.08
CDRT1-207ENST00000583965 VPS72Q15906 364 aa15.54■□□□□ 0.08
CDRT1-207ENST00000583965 ATRNO75882 1429 aa15.53■□□□□ 0.08
CDRT1-207ENST00000583965 PLEKHG2Q9H7P9 1386 aa15.53■□□□□ 0.08
CDRT1-207ENST00000583965 ZNF772Q68DY9 489 aaPredicted RBP15.53■□□□□ 0.08
CDRT1-207ENST00000583965 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
CDRT1-207ENST00000583965 VIRMAQ69YN4 1812 aaKnown RBP15.52■□□□□ 0.08
CDRT1-207ENST00000583965 PKD1L3Q7Z443 1732 aa15.52■□□□□ 0.08
CDRT1-207ENST00000583965 SPATA31A5Q5VU36 1347 aa15.52■□□□□ 0.08
CDRT1-207ENST00000583965 SPATA31A7Q8IWB4 1347 aa15.52■□□□□ 0.08
CDRT1-207ENST00000583965 FCHSD2O94868 740 aa15.52■□□□□ 0.08
CDRT1-207ENST00000583965 TRPC5Q9UL62 973 aaPredicted RBP15.52■□□□□ 0.08
CDRT1-207ENST00000583965 THRAP3Q9Y2W1 955 aaKnown RBP15.52■□□□□ 0.08
CDRT1-207ENST00000583965 DLG5Q8TDM6 1919 aa15.52■□□□□ 0.07
CDRT1-207ENST00000583965 SPATA31A1Q5TZJ5 1347 aa15.51■□□□□ 0.07
CDRT1-207ENST00000583965 SULT6B1Q6IMI4 303 aa15.51■□□□□ 0.07
CDRT1-207ENST00000583965 GLI3P10071 1580 aa15.5■□□□□ 0.07
CDRT1-207ENST00000583965 TCP11L2Q8N4U5 519 aa15.5■□□□□ 0.07
CDRT1-207ENST00000583965 RSPH6AQ9H0K4 717 aa15.5■□□□□ 0.07
CDRT1-207ENST00000583965 ADAMTS8Q9UP79 889 aa15.5■□□□□ 0.07
CDRT1-207ENST00000583965 HMOX1P09601 288 aa15.49■□□□□ 0.07
CDRT1-207ENST00000583965 FAM9BQ8IZU0 186 aa15.49■□□□□ 0.07
CDRT1-207ENST00000583965 USHBP1Q8N6Y0 703 aa15.49■□□□□ 0.07
CDRT1-207ENST00000583965 CCDC9Q9Y3X0 531 aaKnown RBP15.49■□□□□ 0.07
CDRT1-207ENST00000583965 SHANK3Q9BYB0 1731 aa15.48■□□□□ 0.07
CDRT1-207ENST00000583965 BARGINQ6ZT62 677 aa15.48■□□□□ 0.07
CDRT1-207ENST00000583965 AEBP1Q8IUX7 1158 aa15.48■□□□□ 0.07
CDRT1-207ENST00000583965 RAPGEF4Q8WZA2 1011 aa15.48■□□□□ 0.07
CDRT1-207ENST00000583965 CDCA7Q9BWT1 371 aaPredicted RBP15.48■□□□□ 0.07
CDRT1-207ENST00000583965 QTRT2Q9H974 415 aaKnown RBP15.48■□□□□ 0.07
CDRT1-207ENST00000583965 THSD7AQ9UPZ6 1657 aa15.48■□□□□ 0.07
CDRT1-207ENST00000583965 DISP2A7MBM2 1401 aa15.47■□□□□ 0.07
CDRT1-207ENST00000583965 NEFMP07197 916 aa15.47■□□□□ 0.07
CDRT1-207ENST00000583965 IL2RBP14784 551 aa15.47■□□□□ 0.07
CDRT1-207ENST00000583965 GJD4Q96KN9 370 aaPredicted RBP15.47■□□□□ 0.07
CDRT1-207ENST00000583965 PHF23Q9BUL5 403 aaPredicted RBP15.47■□□□□ 0.07
CDRT1-207ENST00000583965 USP35Q9P2H5 1018 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms