RNA–Protein interactions for RNA: ENST00000583483.1

CDH8-210, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 380 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-210ENST00000583483 PTCRAQ6ISU1 281 aaPredicted RBP10.1□□□□□ -0.79
CDH8-210ENST00000583483 TSC1Q92574 1164 aa10.1□□□□□ -0.79
CDH8-210ENST00000583483 SNRKQ9NRH2 765 aa10.1□□□□□ -0.79
CDH8-210ENST00000583483 FGD6Q6ZV73 1430 aa10.09□□□□□ -0.79
CDH8-210ENST00000583483 ABCC2Q92887 1545 aa10.09□□□□□ -0.79
CDH8-210ENST00000583483 KIF14Q15058 1648 aa10.09□□□□□ -0.79
CDH8-210ENST00000583483 PHLDB1Q86UU1 1377 aa10.09□□□□□ -0.79
CDH8-210ENST00000583483 PLB1Q6P1J6 1458 aa10.09□□□□□ -0.79
CDH8-210ENST00000583483 TTBK1Q5TCY1 1321 aaPredicted RBP10.08□□□□□ -0.8
CDH8-210ENST00000583483 A0A0G2JS52 829 aa10.08□□□□□ -0.8
CDH8-210ENST00000583483 TCOF1Q13428 1488 aaKnown RBP10.08□□□□□ -0.8
CDH8-210ENST00000583483 TROQ12816 1431 aaPredicted RBP10.07□□□□□ -0.8
CDH8-210ENST00000583483 PTPN23Q9H3S7 1636 aa10.07□□□□□ -0.8
CDH8-210ENST00000583483 UHRF1BP1LA0JNW5 1464 aa10.07□□□□□ -0.8
CDH8-210ENST00000583483 TMEM259Q4ZIN3 620 aa10.07□□□□□ -0.8
CDH8-210ENST00000583483 HMX1Q9NP08 348 aaPredicted RBP10.07□□□□□ -0.8
CDH8-210ENST00000583483 MIA2Q96PC5 1412 aa10.07□□□□□ -0.8
CDH8-210ENST00000583483 EPS8L1Q8TE68 723 aa10.06□□□□□ -0.8
CDH8-210ENST00000583483 FCF1Q9Y324 198 aaKnown RBP10.06□□□□□ -0.8
CDH8-210ENST00000583483 PTPRGP23470 1445 aa10.06□□□□□ -0.8
CDH8-210ENST00000583483 ZEB1P37275 1124 aaPredicted RBP10.05□□□□□ -0.8
CDH8-210ENST00000583483 EVA1BQ9NVM1 165 aa10.05□□□□□ -0.8
CDH8-210ENST00000583483 CDK11AQ9UQ88 783 aaPredicted RBP10.05□□□□□ -0.8
CDH8-210ENST00000583483 UACAQ9BZF9 1416 aa10.05□□□□□ -0.8
CDH8-210ENST00000583483 USP17L8P0C7I0 530 aa10.04□□□□□ -0.8
CDH8-210ENST00000583483 PTPRNQ16849 979 aa10.04□□□□□ -0.8
CDH8-210ENST00000583483 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
CDH8-210ENST00000583483 ANKLE1Q8NAG6 615 aa10.04□□□□□ -0.8
CDH8-210ENST00000583483 ERCC6L2Q5T890 1561 aa10.04□□□□□ -0.8
CDH8-210ENST00000583483 F12P00748 615 aaPredicted RBP10.03□□□□□ -0.8
CDH8-210ENST00000583483 AKNAQ7Z591 1439 aa10.03□□□□□ -0.8
CDH8-210ENST00000583483 CCDC24Q8N4L8 307 aa10.03□□□□□ -0.8
CDH8-210ENST00000583483 MTMR14Q8NCE2 650 aa10.03□□□□□ -0.8
CDH8-210ENST00000583483 BANK1Q8NDB2 785 aa10.03□□□□□ -0.8
CDH8-210ENST00000583483 NUDT12Q9BQG2 462 aa10.03□□□□□ -0.8
CDH8-210ENST00000583483 MAP10Q9P2G4 905 aa10.03□□□□□ -0.8
CDH8-210ENST00000583483 GTF3C3Q9Y5Q9 886 aa10.03□□□□□ -0.8
CDH8-210ENST00000583483 GCC2Q8IWJ2 1684 aa10.02□□□□□ -0.8
CDH8-210ENST00000583483 CCNYL3P0C7X3 344 aa10.02□□□□□ -0.81
CDH8-210ENST00000583483 HELBQ8NG08 1087 aaPredicted RBP10.02□□□□□ -0.81
CDH8-210ENST00000583483 TRIM34Q9BYJ4 488 aa10.02□□□□□ -0.81
CDH8-210ENST00000583483 CDC42BPAQ5VT25 1732 aa10.02□□□□□ -0.81
CDH8-210ENST00000583483 DNMT1P26358 1616 aaKnown RBP10.01□□□□□ -0.81
CDH8-210ENST00000583483 ZCCHC11Q5TAX3 1644 aaKnown RBP10.01□□□□□ -0.81
CDH8-210ENST00000583483 GGCXP38435 758 aa10.01□□□□□ -0.81
CDH8-210ENST00000583483 KCNH2Q12809 1159 aa10.01□□□□□ -0.81
CDH8-210ENST00000583483 NR6A1Q15406 480 aa10.01□□□□□ -0.81
CDH8-210ENST00000583483 GJD4Q96KN9 370 aaPredicted RBP10.01□□□□□ -0.81
CDH8-210ENST00000583483 CROCC2H7BZ55 1655 aa10.01□□□□□ -0.81
CDH8-210ENST00000583483 PREX2Q70Z35 1606 aa10□□□□□ -0.81
CDH8-210ENST00000583483 ATP10BO94823 1461 aa10□□□□□ -0.81
CDH8-210ENST00000583483 KDM5BQ9UGL1 1544 aa10□□□□□ -0.81
CDH8-210ENST00000583483 ADGBQ8N7X0 1667 aa9.99□□□□□ -0.81
CDH8-210ENST00000583483 ABCC10Q5T3U5 1492 aa9.98□□□□□ -0.81
CDH8-210ENST00000583483 CTHP32929 405 aa9.98□□□□□ -0.81
CDH8-210ENST00000583483 MYO5CQ9NQX4 1742 aa9.98□□□□□ -0.81
CDH8-210ENST00000583483 MCM6Q14566 821 aa9.97□□□□□ -0.81
CDH8-210ENST00000583483 GPR37L1O60883 481 aa9.96□□□□□ -0.82
CDH8-210ENST00000583483 CLSPNQ9HAW4 1339 aa9.96□□□□□ -0.82
CDH8-210ENST00000583483 HFM1A2PYH4 1435 aa9.96□□□□□ -0.82
CDH8-210ENST00000583483 SHANK2Q9UPX8 1470 aa9.96□□□□□ -0.82
CDH8-210ENST00000583483 ARAP3Q8WWN8 1544 aa9.96□□□□□ -0.82
CDH8-210ENST00000583483 SLC19A1P41440 591 aa9.95□□□□□ -0.82
CDH8-210ENST00000583483 PRKD2Q9BZL6 878 aa9.95□□□□□ -0.82
CDH8-210ENST00000583483 UNC93B1Q9H1C4 597 aa9.95□□□□□ -0.82
CDH8-210ENST00000583483 CAMSAP2Q08AD1 1489 aa9.95□□□□□ -0.82
CDH8-210ENST00000583483 ARHGEF5Q12774 1597 aa9.94□□□□□ -0.82
CDH8-210ENST00000583483 TTC37Q6PGP7 1564 aa9.94□□□□□ -0.82
CDH8-210ENST00000583483 GPATCH8Q9UKJ3 1502 aaKnown RBP9.94□□□□□ -0.82
CDH8-210ENST00000583483 SETD5Q9C0A6 1442 aa9.94□□□□□ -0.82
CDH8-210ENST00000583483 BAP1Q92560 729 aa9.94□□□□□ -0.82
CDH8-210ENST00000583483 SKOR1P84550 965 aa9.93□□□□□ -0.82
CDH8-210ENST00000583483 POM121Q96HA1 1249 aa9.93□□□□□ -0.82
CDH8-210ENST00000583483 CDC42BPBQ9Y5S2 1711 aa9.93□□□□□ -0.82
CDH8-210ENST00000583483 ROCK1Q13464 1354 aa9.92□□□□□ -0.82
CDH8-210ENST00000583483 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
CDH8-210ENST00000583483 PLEKHD1A6NEE1 506 aa9.92□□□□□ -0.82
CDH8-210ENST00000583483 RPIAP49247 311 aa9.92□□□□□ -0.82
CDH8-210ENST00000583483 FAM50AQ14320 339 aaKnown RBP9.92□□□□□ -0.82
CDH8-210ENST00000583483 SPRYD7Q5W111 196 aa9.92□□□□□ -0.82
CDH8-210ENST00000583483 CCER1Q8TC90 406 aaPredicted RBP9.92□□□□□ -0.82
CDH8-210ENST00000583483 ADGRL2O95490 1459 aa9.91□□□□□ -0.82
CDH8-210ENST00000583483 PLEKHH2Q8IVE3 1493 aa9.91□□□□□ -0.82
CDH8-210ENST00000583483 DAPK1P53355 1430 aa9.91□□□□□ -0.82
CDH8-210ENST00000583483 TRIM32Q13049 653 aa9.91□□□□□ -0.82
CDH8-210ENST00000583483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDH8-210ENST00000583483 RAB3GAP2Q9H2M9 1393 aa9.9□□□□□ -0.82
CDH8-210ENST00000583483 ABCA9Q8IUA7 1624 aa9.9□□□□□ -0.82
CDH8-210ENST00000583483 SH3BP2P78314 561 aa9.9□□□□□ -0.82
CDH8-210ENST00000583483 LINC01559Q495D7 138 aa9.9□□□□□ -0.82
CDH8-210ENST00000583483 TBC1D2BQ9UPU7 963 aa9.9□□□□□ -0.82
CDH8-210ENST00000583483 WDR7Q9Y4E6 1490 aa9.9□□□□□ -0.83
CDH8-210ENST00000583483 DHX57Q6P158 1386 aaKnown RBP9.89□□□□□ -0.83
CDH8-210ENST00000583483 SAMD9LQ8IVG5 1584 aa9.89□□□□□ -0.83
CDH8-210ENST00000583483 MAST1Q9Y2H9 1570 aa9.89□□□□□ -0.83
CDH8-210ENST00000583483 FOXJ1Q92949 421 aa9.89□□□□□ -0.83
CDH8-210ENST00000583483 OCSTAMPQ9BR26 566 aa9.89□□□□□ -0.83
CDH8-210ENST00000583483 GDPD2Q9HCC8 539 aa9.89□□□□□ -0.83
CDH8-210ENST00000583483 FKBPLQ9UIM3 349 aa9.89□□□□□ -0.83
CDH8-210ENST00000583483 CFAP74Q9C0B2 1584 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms