RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CDV3Q9UKY7 258 aaKnown RBP7.87□□□□□ -1.15
VAPA-206ENST00000583475 POM121Q96HA1 1249 aa7.86□□□□□ -1.15
VAPA-206ENST00000583475 ABL2P42684 1182 aa7.85□□□□□ -1.15
VAPA-206ENST00000583475 TIMP2P16035 220 aa7.84□□□□□ -1.15
VAPA-206ENST00000583475 FSHRP23945 695 aa7.84□□□□□ -1.15
VAPA-206ENST00000583475 PCDHB9Q9Y5E1 797 aa7.84□□□□□ -1.15
VAPA-206ENST00000583475 ESPNB1AK53 854 aa7.83□□□□□ -1.16
VAPA-206ENST00000583475 CAPN5O15484 640 aaPredicted RBP7.83□□□□□ -1.16
VAPA-206ENST00000583475 WDR4P57081 412 aaKnown RBP7.83□□□□□ -1.16
VAPA-206ENST00000583475 INTS6LQ5JSJ4 861 aaKnown RBP7.83□□□□□ -1.16
VAPA-206ENST00000583475 GIGYF1O75420 1035 aaPredicted RBP7.82□□□□□ -1.16
VAPA-206ENST00000583475 UBTFP17480 764 aaKnown RBP7.82□□□□□ -1.16
VAPA-206ENST00000583475 MCCD1P59942 119 aaPredicted RBP7.82□□□□□ -1.16
VAPA-206ENST00000583475 NBPF20Q3BBV1 942 aa7.82□□□□□ -1.16
VAPA-206ENST00000583475 CCDC116Q8IYX3 515 aa7.82□□□□□ -1.16
VAPA-206ENST00000583475 ITPKCQ96DU7 683 aa7.82□□□□□ -1.16
VAPA-206ENST00000583475 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
VAPA-206ENST00000583475 ZIC2O95409 532 aaPredicted RBP7.81□□□□□ -1.16
VAPA-206ENST00000583475 VAC14Q08AM6 782 aa7.81□□□□□ -1.16
VAPA-206ENST00000583475 PPP1R26Q5T8A7 1209 aaPredicted RBP7.81□□□□□ -1.16
VAPA-206ENST00000583475 ZNF330Q9Y3S2 320 aaPredicted RBP7.81□□□□□ -1.16
VAPA-206ENST00000583475 POTECB2RU33 542 aa7.8□□□□□ -1.16
VAPA-206ENST00000583475 RAD21O60216 631 aa7.8□□□□□ -1.16
VAPA-206ENST00000583475 WASHC4Q2M389 1173 aa7.8□□□□□ -1.16
VAPA-206ENST00000583475 EMILIN1Q9Y6C2 1016 aa7.8□□□□□ -1.16
VAPA-206ENST00000583475 ERVH48-1M5A8F1 160 aa7.79□□□□□ -1.16
VAPA-206ENST00000583475 SEPT12Q8IYM1 358 aa7.79□□□□□ -1.16
VAPA-206ENST00000583475 CLUAP1Q96AJ1 413 aa7.79□□□□□ -1.16
VAPA-206ENST00000583475 ATP13A2Q9NQ11 1180 aa7.79□□□□□ -1.16
VAPA-206ENST00000583475 CEP126Q9P2H0 1117 aa7.79□□□□□ -1.16
VAPA-206ENST00000583475 RAB15P59190 212 aa7.78□□□□□ -1.16
VAPA-206ENST00000583475 EIF4G2P78344 907 aaKnown RBP eCLIP7.78□□□□□ -1.16
VAPA-206ENST00000583475 DHX9Q08211 1270 aaKnown RBP7.78□□□□□ -1.16
VAPA-206ENST00000583475 TRIM46Q7Z4K8 759 aa7.78□□□□□ -1.16
VAPA-206ENST00000583475 ZNF592Q92610 1267 aa7.78□□□□□ -1.16
VAPA-206ENST00000583475 TMPRSS4Q9NRS4 437 aa7.78□□□□□ -1.16
VAPA-206ENST00000583475 ZNF787Q6DD87 383 aa7.77□□□□□ -1.17
VAPA-206ENST00000583475 PGPEP1Q9NXJ5 209 aa7.77□□□□□ -1.17
VAPA-206ENST00000583475 GMPR2Q9P2T1 348 aaKnown RBP7.77□□□□□ -1.17
VAPA-206ENST00000583475 BMP1P13497 986 aa7.76□□□□□ -1.17
VAPA-206ENST00000583475 PHTF2Q8N3S3 785 aa7.76□□□□□ -1.17
VAPA-206ENST00000583475 FNBP4Q8N3X1 1017 aaPredicted RBP7.76□□□□□ -1.17
VAPA-206ENST00000583475 GTF3C3Q9Y5Q9 886 aa7.76□□□□□ -1.17
VAPA-206ENST00000583475 LILRA1O75019 489 aa7.75□□□□□ -1.17
VAPA-206ENST00000583475 CBLBQ13191 982 aa7.75□□□□□ -1.17
VAPA-206ENST00000583475 RNF20Q5VTR2 975 aa7.75□□□□□ -1.17
VAPA-206ENST00000583475 Q6ZVU0 165 aa7.75□□□□□ -1.17
VAPA-206ENST00000583475 ALG2Q9H553 416 aa7.75□□□□□ -1.17
VAPA-206ENST00000583475 A6NJR5 290 aa7.74□□□□□ -1.17
VAPA-206ENST00000583475 ADD1P35611 737 aaKnown RBP7.74□□□□□ -1.17
VAPA-206ENST00000583475 TSGA10IPQ3SY00 556 aa7.74□□□□□ -1.17
VAPA-206ENST00000583475 MRPL14Q6P1L8 145 aaKnown RBP7.74□□□□□ -1.17
VAPA-206ENST00000583475 CCDC125Q86Z20 511 aa7.74□□□□□ -1.17
VAPA-206ENST00000583475 MEIOBQ8N635 442 aa7.74□□□□□ -1.17
VAPA-206ENST00000583475 ZNF784Q8NCA9 323 aaPredicted RBP7.74□□□□□ -1.17
VAPA-206ENST00000583475 POM121CA8CG34 1229 aa7.73□□□□□ -1.17
VAPA-206ENST00000583475 SOX11P35716 441 aa7.73□□□□□ -1.17
VAPA-206ENST00000583475 SEMA3FQ13275 785 aa7.73□□□□□ -1.17
VAPA-206ENST00000583475 WWC1Q8IX03 1113 aa7.73□□□□□ -1.17
VAPA-206ENST00000583475 ZFP42Q96MM3 310 aa7.73□□□□□ -1.17
VAPA-206ENST00000583475 CCDC85AQ96PX6 553 aaPredicted RBP7.73□□□□□ -1.17
VAPA-206ENST00000583475 C11orf95C9JLR9 678 aaPredicted RBP7.72□□□□□ -1.17
VAPA-206ENST00000583475 CHIC2Q9UKJ5 165 aa7.72□□□□□ -1.17
VAPA-206ENST00000583475 SNRPBP14678 240 aaKnown RBP7.71□□□□□ -1.18
VAPA-206ENST00000583475 PROSER2Q86WR7 435 aaPredicted RBP7.71□□□□□ -1.18
VAPA-206ENST00000583475 KDF1Q8NAX2 398 aaPredicted RBP7.71□□□□□ -1.18
VAPA-206ENST00000583475 ADAMTS19Q8TE59 1207 aa7.71□□□□□ -1.18
VAPA-206ENST00000583475 TRIM47Q96LD4 638 aa7.71□□□□□ -1.18
VAPA-206ENST00000583475 PURBQ96QR8 312 aaKnown RBP7.71□□□□□ -1.18
VAPA-206ENST00000583475 CDCA7Q9BWT1 371 aaPredicted RBP7.71□□□□□ -1.18
VAPA-206ENST00000583475 SENP2Q9HC62 589 aa7.71□□□□□ -1.18
VAPA-206ENST00000583475 CYLDQ9NQC7 956 aa7.71□□□□□ -1.18
VAPA-206ENST00000583475 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.18
VAPA-206ENST00000583475 SCTRP47872 440 aa7.7□□□□□ -1.18
VAPA-206ENST00000583475 ERVK-9P63128 1117 aa7.7□□□□□ -1.18
VAPA-206ENST00000583475 SCARF1Q14162 830 aa7.7□□□□□ -1.18
VAPA-206ENST00000583475 SLFNL1Q499Z3 407 aa7.7□□□□□ -1.18
VAPA-206ENST00000583475 LINC00528Q8N1L1 170 aa7.7□□□□□ -1.18
VAPA-206ENST00000583475 AGBL1Q96MI9 1066 aa7.7□□□□□ -1.18
VAPA-206ENST00000583475 TSEN34Q9BSV6 310 aaKnown RBP7.7□□□□□ -1.18
VAPA-206ENST00000583475 C6orf118Q5T5N4 469 aa7.69□□□□□ -1.18
VAPA-206ENST00000583475 HDGFL1Q5TGJ6 251 aa7.69□□□□□ -1.18
VAPA-206ENST00000583475 KIFC2Q96AC6 838 aa7.69□□□□□ -1.18
VAPA-206ENST00000583475 BMP2P12643 396 aa7.68□□□□□ -1.18
VAPA-206ENST00000583475 CC2D2BQ6DHV5 1058 aa7.68□□□□□ -1.18
VAPA-206ENST00000583475 RNF135Q8IUD6 432 aa7.68□□□□□ -1.18
VAPA-206ENST00000583475 PIK3CDO00329 1044 aa7.67□□□□□ -1.18
VAPA-206ENST00000583475 SPINT1O43278 529 aa7.67□□□□□ -1.18
VAPA-206ENST00000583475 UPP2O95045 317 aa7.67□□□□□ -1.18
VAPA-206ENST00000583475 ADH1AP07327 375 aa7.67□□□□□ -1.18
VAPA-206ENST00000583475 RELBQ01201 579 aa7.67□□□□□ -1.18
VAPA-206ENST00000583475 TRIM52Q96A61 297 aa7.67□□□□□ -1.18
VAPA-206ENST00000583475 TRAK2O60296 914 aa7.66□□□□□ -1.18
VAPA-206ENST00000583475 PTGIRP43119 386 aa7.66□□□□□ -1.18
VAPA-206ENST00000583475 OSBPL3Q9H4L5 887 aa7.66□□□□□ -1.18
VAPA-206ENST00000583475 ZNF395Q9H8N7 513 aaPredicted RBP7.66□□□□□ -1.18
VAPA-206ENST00000583475 SOS2Q07890 1332 aaPredicted RBP7.65□□□□□ -1.18
VAPA-206ENST00000583475 PLPP7Q8NBV4 271 aa7.65□□□□□ -1.18
VAPA-206ENST00000583475 ZMYND15Q9H091 742 aa7.65□□□□□ -1.18
VAPA-206ENST00000583475 DOLKQ9UPQ8 538 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms