RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
ITGB4-209ENST00000583327 IL13P35225 146 aa18.36■□□□□ 0.53
ITGB4-209ENST00000583327 CFAP53Q96M91 514 aa18.36■□□□□ 0.53
ITGB4-209ENST00000583327 BLMP54132 1417 aaPredicted RBP18.35■□□□□ 0.53
ITGB4-209ENST00000583327 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
ITGB4-209ENST00000583327 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
ITGB4-209ENST00000583327 DIAPH1O60610 1272 aaKnown RBP18.34■□□□□ 0.53
ITGB4-209ENST00000583327 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
ITGB4-209ENST00000583327 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
ITGB4-209ENST00000583327 CHRNA2Q15822 529 aa18.33■□□□□ 0.52
ITGB4-209ENST00000583327 CAMTA1Q9Y6Y1 1673 aa18.32■□□□□ 0.52
ITGB4-209ENST00000583327 PRDM11Q9NQV5 511 aa18.32■□□□□ 0.52
ITGB4-209ENST00000583327 LRP6O75581 1613 aa18.31■□□□□ 0.52
ITGB4-209ENST00000583327 NUTM2BA6NNL0 878 aaPredicted RBP18.3■□□□□ 0.52
ITGB4-209ENST00000583327 NUTM2EB1AL46 878 aaPredicted RBP18.3■□□□□ 0.52
ITGB4-209ENST00000583327 NUTM2AQ8IVF1 878 aaPredicted RBP18.3■□□□□ 0.52
ITGB4-209ENST00000583327 COL14A1Q05707 1796 aaKnown RBP18.3■□□□□ 0.52
ITGB4-209ENST00000583327 ERBB3P21860 1342 aa18.28■□□□□ 0.52
ITGB4-209ENST00000583327 ADAMTS2O95450 1211 aa18.28■□□□□ 0.52
ITGB4-209ENST00000583327 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
ITGB4-209ENST00000583327 ADAMTS8Q9UP79 889 aa18.28■□□□□ 0.52
ITGB4-209ENST00000583327 NUDCQ9Y266 331 aa18.28■□□□□ 0.52
ITGB4-209ENST00000583327 RGPD1P0DJD0 1748 aa18.28■□□□□ 0.52
ITGB4-209ENST00000583327 SLIT2O94813 1529 aa18.28■□□□□ 0.52
ITGB4-209ENST00000583327 IGSF1Q8N6C5 1336 aa18.27■□□□□ 0.52
ITGB4-209ENST00000583327 NCAPD2Q15021 1401 aa18.27■□□□□ 0.52
ITGB4-209ENST00000583327 FNBP4Q8N3X1 1017 aaPredicted RBP18.27■□□□□ 0.52
ITGB4-209ENST00000583327 EYA1Q99502 592 aa18.27■□□□□ 0.52
ITGB4-209ENST00000583327 COL5A2P05997 1499 aaPredicted RBP18.26■□□□□ 0.51
ITGB4-209ENST00000583327 ZBTB7CA1YPR0 619 aa18.26■□□□□ 0.51
ITGB4-209ENST00000583327 RGPD5Q99666 1765 aa18.26■□□□□ 0.51
ITGB4-209ENST00000583327 NBPF6Q5VWK0 638 aa18.25■□□□□ 0.51
ITGB4-209ENST00000583327 NBPF4Q96M43 638 aa18.25■□□□□ 0.51
ITGB4-209ENST00000583327 BTG4Q9NY30 223 aa18.25■□□□□ 0.51
ITGB4-209ENST00000583327 KDRP35968 1356 aa18.25■□□□□ 0.51
ITGB4-209ENST00000583327 WDR17Q8IZU2 1322 aa18.24■□□□□ 0.51
ITGB4-209ENST00000583327 FCHSD2O94868 740 aa18.24■□□□□ 0.51
ITGB4-209ENST00000583327 WDR43Q15061 677 aaKnown RBP eCLIP18.23■□□□□ 0.51
ITGB4-209ENST00000583327 LTV1Q96GA3 475 aaPredicted RBP18.23■□□□□ 0.51
ITGB4-209ENST00000583327 BCL9LQ86UU0 1499 aa18.22■□□□□ 0.51
ITGB4-209ENST00000583327 U2AF1L5P0DN76 240 aaPredicted RBP18.22■□□□□ 0.51
ITGB4-209ENST00000583327 U2AF1Q01081 240 aaKnown RBP eCLIP18.22■□□□□ 0.51
ITGB4-209ENST00000583327 FAM9BQ8IZU0 186 aa18.22■□□□□ 0.51
ITGB4-209ENST00000583327 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
ITGB4-209ENST00000583327 RSPH6AQ9H0K4 717 aa18.22■□□□□ 0.51
ITGB4-209ENST00000583327 NWD2Q9ULI1 1742 aa18.21■□□□□ 0.51
ITGB4-209ENST00000583327 U2SURPO15042 1029 aaKnown RBP18.21■□□□□ 0.51
ITGB4-209ENST00000583327 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
ITGB4-209ENST00000583327 PLCH1Q4KWH8 1693 aa18.2■□□□□ 0.5
ITGB4-209ENST00000583327 FAM208AQ9UK61 1670 aaKnown RBP18.2■□□□□ 0.5
ITGB4-209ENST00000583327 SULT6B1Q6IMI4 303 aa18.2■□□□□ 0.5
ITGB4-209ENST00000583327 LARP1Q6PKG0 1096 aaKnown RBP18.2■□□□□ 0.5
ITGB4-209ENST00000583327 NGLY1Q96IV0 654 aa18.2■□□□□ 0.5
ITGB4-209ENST00000583327 CARD10Q9BWT7 1032 aa18.2■□□□□ 0.5
ITGB4-209ENST00000583327 EVA1CP58658 441 aa18.19■□□□□ 0.5
ITGB4-209ENST00000583327 AEBP1Q8IUX7 1158 aa18.19■□□□□ 0.5
ITGB4-209ENST00000583327 UNC5CLQ8IV45 518 aa18.19■□□□□ 0.5
ITGB4-209ENST00000583327 C8orf37Q96NL8 207 aa18.19■□□□□ 0.5
ITGB4-209ENST00000583327 CRB1P82279 1406 aa18.18■□□□□ 0.5
ITGB4-209ENST00000583327 RGPD2P0DJD1 1756 aa18.17■□□□□ 0.5
ITGB4-209ENST00000583327 HMOX1P09601 288 aa18.17■□□□□ 0.5
ITGB4-209ENST00000583327 PNNQ9H307 717 aaKnown RBP18.17■□□□□ 0.5
ITGB4-209ENST00000583327 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
ITGB4-209ENST00000583327 CSB-PGBD3P0DP91 1061 aa18.16■□□□□ 0.5
ITGB4-209ENST00000583327 RUNDC1Q96C34 613 aa18.16■□□□□ 0.5
ITGB4-209ENST00000583327 STRN4Q9NRL3 753 aa18.16■□□□□ 0.5
ITGB4-209ENST00000583327 NLRP2Q9NX02 1062 aa18.16■□□□□ 0.5
ITGB4-209ENST00000583327 VPS72Q15906 364 aa18.15■□□□□ 0.5
ITGB4-209ENST00000583327 NCBP3Q53F19 620 aaKnown RBP18.15■□□□□ 0.5
ITGB4-209ENST00000583327 TOM1L2Q6ZVM7 507 aa18.15■□□□□ 0.5
ITGB4-209ENST00000583327 USHBP1Q8N6Y0 703 aa18.15■□□□□ 0.5
ITGB4-209ENST00000583327 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.15■□□□□ 0.5
ITGB4-209ENST00000583327 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
ITGB4-209ENST00000583327 MEX3CQ5U5Q3 659 aaKnown RBP18.14■□□□□ 0.49
ITGB4-209ENST00000583327 ILDR1Q86SU0 546 aaPredicted RBP18.14■□□□□ 0.49
ITGB4-209ENST00000583327 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
ITGB4-209ENST00000583327 USP21Q9UK80 565 aa18.14■□□□□ 0.49
ITGB4-209ENST00000583327 AFF2P51816 1311 aa18.14■□□□□ 0.49
ITGB4-209ENST00000583327 SPATA31A1Q5TZJ5 1347 aa18.14■□□□□ 0.49
ITGB4-209ENST00000583327 SPATA31A5Q5VU36 1347 aa18.14■□□□□ 0.49
ITGB4-209ENST00000583327 SPATA31A7Q8IWB4 1347 aa18.14■□□□□ 0.49
ITGB4-209ENST00000583327 THRAP3Q9Y2W1 955 aaKnown RBP18.13■□□□□ 0.49
ITGB4-209ENST00000583327 CCDC146Q8IYE0 955 aa18.12■□□□□ 0.49
ITGB4-209ENST00000583327 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.11■□□□□ 0.49
ITGB4-209ENST00000583327 DISP2A7MBM2 1401 aa18.11■□□□□ 0.49
ITGB4-209ENST00000583327 ATRNO75882 1429 aa18.1■□□□□ 0.49
ITGB4-209ENST00000583327 BARGINQ6ZT62 677 aa18.1■□□□□ 0.49
ITGB4-209ENST00000583327 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
ITGB4-209ENST00000583327 APAF1O14727 1248 aa18.09■□□□□ 0.49
ITGB4-209ENST00000583327 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
ITGB4-209ENST00000583327 MEGF6O75095 1541 aa18.08■□□□□ 0.49
ITGB4-209ENST00000583327 ONECUT3O60422 494 aaPredicted RBP18.08■□□□□ 0.48
ITGB4-209ENST00000583327 IL2RBP14784 551 aa18.08■□□□□ 0.48
ITGB4-209ENST00000583327 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
ITGB4-209ENST00000583327 NGEFQ8N5V2 710 aa18.08■□□□□ 0.48
ITGB4-209ENST00000583327 OVOS2A0A0G2JMS6 1433 aa18.07■□□□□ 0.48
ITGB4-209ENST00000583327 MTHFSDQ2M296 383 aaKnown RBP18.07■□□□□ 0.48
ITGB4-209ENST00000583327 AMOTQ4VCS5 1084 aa18.07■□□□□ 0.48
ITGB4-209ENST00000583327 RAPGEF4Q8WZA2 1011 aa18.07■□□□□ 0.48
ITGB4-209ENST00000583327 GJD4Q96KN9 370 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms