RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
GGA3-216ENST00000583282 AATKQ6ZMQ8 1374 aa19.07■□□□□ 0.64
GGA3-216ENST00000583282 PPM1GO15355 546 aaPredicted RBP19.07■□□□□ 0.64
GGA3-216ENST00000583282 USP21Q9UK80 565 aa19.07■□□□□ 0.64
GGA3-216ENST00000583282 BCL9LQ86UU0 1499 aa19.07■□□□□ 0.64
GGA3-216ENST00000583282 SMG6Q86US8 1419 aaKnown RBP19.07■□□□□ 0.64
GGA3-216ENST00000583282 FAM208AQ9UK61 1670 aaKnown RBP19.06■□□□□ 0.64
GGA3-216ENST00000583282 AMPHP49418 695 aa19.06■□□□□ 0.64
GGA3-216ENST00000583282 STRN4Q9NRL3 753 aa19.06■□□□□ 0.64
GGA3-216ENST00000583282 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
GGA3-216ENST00000583282 RGPD2P0DJD1 1756 aa19.05■□□□□ 0.64
GGA3-216ENST00000583282 BLMP54132 1417 aaPredicted RBP19.05■□□□□ 0.64
GGA3-216ENST00000583282 FLT4P35916 1363 aa19.05■□□□□ 0.64
GGA3-216ENST00000583282 FNBP4Q8N3X1 1017 aaPredicted RBP19.04■□□□□ 0.64
GGA3-216ENST00000583282 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
GGA3-216ENST00000583282 PARD3Q8TEW0 1356 aa19.04■□□□□ 0.64
GGA3-216ENST00000583282 ATRNO75882 1429 aa19.03■□□□□ 0.64
GGA3-216ENST00000583282 HOXC9P31274 260 aa19.03■□□□□ 0.64
GGA3-216ENST00000583282 LTV1Q96GA3 475 aaPredicted RBP19.03■□□□□ 0.64
GGA3-216ENST00000583282 AXIN2Q9Y2T1 843 aa19.03■□□□□ 0.64
GGA3-216ENST00000583282 GLI3P10071 1580 aa19.02■□□□□ 0.64
GGA3-216ENST00000583282 UNC5CLQ8IV45 518 aa19.02■□□□□ 0.64
GGA3-216ENST00000583282 POLKQ9UBT6 870 aa19.02■□□□□ 0.64
GGA3-216ENST00000583282 CCDC9Q9Y3X0 531 aaKnown RBP19.02■□□□□ 0.64
GGA3-216ENST00000583282 CSB-PGBD3P0DP91 1061 aa19.01■□□□□ 0.63
GGA3-216ENST00000583282 ZNF772Q68DY9 489 aaPredicted RBP19.01■□□□□ 0.63
GGA3-216ENST00000583282 EVA1CP58658 441 aa19■□□□□ 0.63
GGA3-216ENST00000583282 IP6K1Q92551 441 aa19■□□□□ 0.63
GGA3-216ENST00000583282 RGS17Q9UGC6 210 aaPredicted RBP19■□□□□ 0.63
GGA3-216ENST00000583282 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
GGA3-216ENST00000583282 ERBB3P21860 1342 aa19■□□□□ 0.63
GGA3-216ENST00000583282 LARP1Q6PKG0 1096 aaKnown RBP18.99■□□□□ 0.63
GGA3-216ENST00000583282 ANKRD24Q8TF21 1146 aa18.99■□□□□ 0.63
GGA3-216ENST00000583282 INSRP06213 1382 aa18.98■□□□□ 0.63
GGA3-216ENST00000583282 HSP90AB2PQ58FF8 381 aa18.98■□□□□ 0.63
GGA3-216ENST00000583282 TRPC5Q9UL62 973 aaPredicted RBP18.98■□□□□ 0.63
GGA3-216ENST00000583282 CRB1P82279 1406 aa18.98■□□□□ 0.63
GGA3-216ENST00000583282 WDR17Q8IZU2 1322 aa18.98■□□□□ 0.63
GGA3-216ENST00000583282 USP35Q9P2H5 1018 aa18.97■□□□□ 0.63
GGA3-216ENST00000583282 COL3A1P02461 1466 aaPredicted RBP18.97■□□□□ 0.63
GGA3-216ENST00000583282 PPP2R1AP30153 589 aa18.96■□□□□ 0.63
GGA3-216ENST00000583282 MTHFSP49914 203 aa18.96■□□□□ 0.63
GGA3-216ENST00000583282 POTEAQ6S8J7 498 aa18.96■□□□□ 0.63
GGA3-216ENST00000583282 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
GGA3-216ENST00000583282 VPS72Q15906 364 aa18.95■□□□□ 0.62
GGA3-216ENST00000583282 QTRT2Q9H974 415 aaKnown RBP18.95■□□□□ 0.62
GGA3-216ENST00000583282 RALBP1Q15311 655 aa18.94■□□□□ 0.62
GGA3-216ENST00000583282 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
GGA3-216ENST00000583282 NLRP2Q9NX02 1062 aa18.93■□□□□ 0.62
GGA3-216ENST00000583282 RGPD1P0DJD0 1748 aa18.93■□□□□ 0.62
GGA3-216ENST00000583282 SPATA31A5Q5VU36 1347 aa18.93■□□□□ 0.62
GGA3-216ENST00000583282 SPATA31A7Q8IWB4 1347 aa18.93■□□□□ 0.62
GGA3-216ENST00000583282 MYBBP1AQ9BQG0 1328 aaKnown RBP18.93■□□□□ 0.62
GGA3-216ENST00000583282 LRRC37A3O60309 1634 aa18.92■□□□□ 0.62
GGA3-216ENST00000583282 THSD7AQ9UPZ6 1657 aa18.92■□□□□ 0.62
GGA3-216ENST00000583282 USHBP1Q8N6Y0 703 aa18.92■□□□□ 0.62
GGA3-216ENST00000583282 SPATA31A1Q5TZJ5 1347 aa18.92■□□□□ 0.62
GGA3-216ENST00000583282 RGS12O14924 1447 aa18.91■□□□□ 0.62
GGA3-216ENST00000583282 PARP4Q9UKK3 1724 aaKnown RBP18.91■□□□□ 0.62
GGA3-216ENST00000583282 A0A0G2JS52 829 aa18.91■□□□□ 0.62
GGA3-216ENST00000583282 ANP32CO43423 234 aa18.91■□□□□ 0.62
GGA3-216ENST00000583282 MYT1Q01538 1121 aa18.91■□□□□ 0.62
GGA3-216ENST00000583282 EIF4A2Q14240 407 aaKnown RBP18.91■□□□□ 0.62
GGA3-216ENST00000583282 GJD4Q96KN9 370 aaPredicted RBP18.91■□□□□ 0.62
GGA3-216ENST00000583282 FAM98CQ17RN3 349 aaKnown RBP18.89■□□□□ 0.61
GGA3-216ENST00000583282 CFAP53Q96M91 514 aa18.89■□□□□ 0.61
GGA3-216ENST00000583282 BRWD3Q6RI45 1802 aa18.88■□□□□ 0.61
GGA3-216ENST00000583282 RXRBP28702 533 aa18.88■□□□□ 0.61
GGA3-216ENST00000583282 RBM6P78332 1123 aaKnown RBP18.88■□□□□ 0.61
GGA3-216ENST00000583282 MEGF6O75095 1541 aa18.87■□□□□ 0.61
GGA3-216ENST00000583282 TCP11L2Q8N4U5 519 aa18.87■□□□□ 0.61
GGA3-216ENST00000583282 CARD10Q9BWT7 1032 aa18.87■□□□□ 0.61
GGA3-216ENST00000583282 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
GGA3-216ENST00000583282 NBPF6Q5VWK0 638 aa18.86■□□□□ 0.61
GGA3-216ENST00000583282 NBPF4Q96M43 638 aa18.86■□□□□ 0.61
GGA3-216ENST00000583282 NCAPD2Q15021 1401 aa18.85■□□□□ 0.61
GGA3-216ENST00000583282 DIAPH1O60610 1272 aaKnown RBP18.85■□□□□ 0.61
GGA3-216ENST00000583282 SHANK3Q9BYB0 1731 aa18.84■□□□□ 0.61
GGA3-216ENST00000583282 IL13P35225 146 aa18.84■□□□□ 0.61
GGA3-216ENST00000583282 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
GGA3-216ENST00000583282 EYA1Q99502 592 aa18.84■□□□□ 0.61
GGA3-216ENST00000583282 IGSF1Q8N6C5 1336 aa18.83■□□□□ 0.61
GGA3-216ENST00000583282 U2SURPO15042 1029 aaKnown RBP18.83■□□□□ 0.6
GGA3-216ENST00000583282 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.6
GGA3-216ENST00000583282 TNS2Q63HR2 1409 aa18.83■□□□□ 0.6
GGA3-216ENST00000583282 THRAP3Q9Y2W1 955 aaKnown RBP18.82■□□□□ 0.6
GGA3-216ENST00000583282 BARGINQ6ZT62 677 aa18.81■□□□□ 0.6
GGA3-216ENST00000583282 AEBP1Q8IUX7 1158 aa18.81■□□□□ 0.6
GGA3-216ENST00000583282 HMOX1P09601 288 aa18.8■□□□□ 0.6
GGA3-216ENST00000583282 SEPT12Q8IYM1 358 aa18.8■□□□□ 0.6
GGA3-216ENST00000583282 OVOS2A0A0G2JMS6 1433 aa18.8■□□□□ 0.6
GGA3-216ENST00000583282 IL2RBP14784 551 aa18.79■□□□□ 0.6
GGA3-216ENST00000583282 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
GGA3-216ENST00000583282 RAPGEF4Q8WZA2 1011 aa18.78■□□□□ 0.6
GGA3-216ENST00000583282 CCDC184Q52MB2 194 aa18.77■□□□□ 0.6
GGA3-216ENST00000583282 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
GGA3-216ENST00000583282 U2AF1L5P0DN76 240 aaPredicted RBP18.76■□□□□ 0.59
GGA3-216ENST00000583282 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
GGA3-216ENST00000583282 U2AF1Q01081 240 aaKnown RBP eCLIP18.76■□□□□ 0.59
GGA3-216ENST00000583282 KDRP35968 1356 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms