RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 GTF3C3Q9Y5Q9 886 aa16.88■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 AATKQ6ZMQ8 1374 aa16.86■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 FBLN1P23142 703 aa16.86■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 UNC5CLQ8IV45 518 aa16.86■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 YTHDC1Q96MU7 727 aaKnown RBP16.86■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 LTN1O94822 1766 aa16.86■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.85■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 CAMTA1Q9Y6Y1 1673 aa16.84■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 COL18A1P39060 1754 aa16.84■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 MORC1Q86VD1 984 aa16.84■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 NPC1L1Q9UHC9 1359 aa16.83■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 ABCC6O95255 1503 aa16.83■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 MAP3K19Q56UN5 1328 aa16.83■□□□□ 0.29
CCDC144NL-AS1-216ENST00000582583 RRS1Q15050 365 aaKnown RBP16.83■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 POTEAQ6S8J7 498 aa16.83■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 QTRT2Q9H974 415 aaKnown RBP16.83■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 ATRNO75882 1429 aa16.82■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 STRN4Q9NRL3 753 aa16.81■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 COL5A2P05997 1499 aaPredicted RBP16.81■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 AMPHP49418 695 aa16.81■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 EVA1CP58658 441 aa16.81■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 VPS72Q15906 364 aa16.8■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 RGPD5Q99666 1765 aa16.8■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 IP6K1Q92551 441 aa16.79■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 HOXC9P31274 260 aa16.78■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 EMILIN1Q9Y6C2 1016 aa16.78■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 MAP2P11137 1827 aaKnown RBP16.78■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 BLMP54132 1417 aaPredicted RBP16.78■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 GJD4Q96KN9 370 aaPredicted RBP16.78■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 PEAK1Q9H792 1746 aa16.77■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 FLT4P35916 1363 aa16.77■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 RXRBP28702 533 aa16.77■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 RBM6P78332 1123 aaKnown RBP16.77■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 LARP1Q6PKG0 1096 aaKnown RBP16.77■□□□□ 0.28
CCDC144NL-AS1-216ENST00000582583 ERBB3P21860 1342 aa16.76■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 WDR17Q8IZU2 1322 aa16.76■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 CSB-PGBD3P0DP91 1061 aa16.75■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 SPATA31A5Q5VU36 1347 aa16.75■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 SPATA31A7Q8IWB4 1347 aa16.75■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 GLI3P10071 1580 aa16.75■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 CRB1P82279 1406 aa16.75■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 SMG6Q86US8 1419 aaKnown RBP16.74■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 HSP90AB2PQ58FF8 381 aa16.74■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 SPATA31A1Q5TZJ5 1347 aa16.74■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 INSRP06213 1382 aa16.74■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
CCDC144NL-AS1-216ENST00000582583 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 FAM208AQ9UK61 1670 aaKnown RBP16.7■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 MTHFSP49914 203 aa16.7■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 TCP11L2Q8N4U5 519 aa16.7■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 CARD10Q9BWT7 1032 aa16.7■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 PARD3Q8TEW0 1356 aa16.7■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 FAM98CQ17RN3 349 aaKnown RBP16.69■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 PELP1Q8IZL8 1130 aaKnown RBP16.69■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 THRAP3Q9Y2W1 955 aaKnown RBP16.69■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 RGS12O14924 1447 aa16.69■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 BARGINQ6ZT62 677 aa16.68■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 A0A0G2JS52 829 aa16.67■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 ONECUT3O60422 494 aaPredicted RBP16.67■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 MYT1Q01538 1121 aa16.67■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 ILDR2Q71H61 639 aa16.67■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 EIF4A2Q14240 407 aaKnown RBP16.66■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 RALBP1Q15311 655 aa16.66■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 RGPD2P0DJD1 1756 aa16.66■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 SEPT12Q8IYM1 358 aa16.65■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 CCER2I3L3R5 266 aa16.65■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 NBPF6Q5VWK0 638 aa16.65■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 NBPF4Q96M43 638 aa16.65■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
CCDC144NL-AS1-216ENST00000582583 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 USHBP1Q8N6Y0 703 aa16.62■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 EYA1Q99502 592 aa16.62■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 PRKRIP1Q9H875 184 aaPredicted RBP16.62■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 DIAPH1O60610 1272 aaKnown RBP16.61■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 IL2RBP14784 551 aa16.61■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 IL13P35225 146 aa16.61■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
CCDC144NL-AS1-216ENST00000582583 MYBBP1AQ9BQG0 1328 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms