RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
SNRPD1-204ENST00000582475 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
SNRPD1-204ENST00000582475 ARHGEF25Q86VW2 580 aa16.49■□□□□ 0.23
SNRPD1-204ENST00000582475 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
SNRPD1-204ENST00000582475 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
SNRPD1-204ENST00000582475 FBLN1P23142 703 aa16.48■□□□□ 0.23
SNRPD1-204ENST00000582475 QTRT2Q9H974 415 aaKnown RBP16.48■□□□□ 0.23
SNRPD1-204ENST00000582475 BTG4Q9NY30 223 aa16.48■□□□□ 0.23
SNRPD1-204ENST00000582475 CPDO75976 1380 aa16.48■□□□□ 0.23
SNRPD1-204ENST00000582475 OVOS2A0A0J9YW53 1432 aa16.47■□□□□ 0.23
SNRPD1-204ENST00000582475 OVOS2Q6IE36 1432 aa16.47■□□□□ 0.23
SNRPD1-204ENST00000582475 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
SNRPD1-204ENST00000582475 UNC5CLQ8IV45 518 aa16.47■□□□□ 0.23
SNRPD1-204ENST00000582475 SLIT3O75094 1523 aa16.46■□□□□ 0.23
SNRPD1-204ENST00000582475 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
SNRPD1-204ENST00000582475 POTEAQ6S8J7 498 aa16.46■□□□□ 0.23
SNRPD1-204ENST00000582475 EVA1CP58658 441 aa16.45■□□□□ 0.22
SNRPD1-204ENST00000582475 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
SNRPD1-204ENST00000582475 CRYBG1Q9Y4K1 1723 aa16.45■□□□□ 0.22
SNRPD1-204ENST00000582475 MORC1Q86VD1 984 aa16.44■□□□□ 0.22
SNRPD1-204ENST00000582475 AXIN2Q9Y2T1 843 aa16.44■□□□□ 0.22
SNRPD1-204ENST00000582475 ABCA3Q99758 1704 aa16.44■□□□□ 0.22
SNRPD1-204ENST00000582475 PHRF1Q9P1Y6 1649 aaKnown RBP16.44■□□□□ 0.22
SNRPD1-204ENST00000582475 SLIT2O94813 1529 aa16.44■□□□□ 0.22
SNRPD1-204ENST00000582475 BCL9LQ86UU0 1499 aa16.43■□□□□ 0.22
SNRPD1-204ENST00000582475 AATKQ6ZMQ8 1374 aa16.43■□□□□ 0.22
SNRPD1-204ENST00000582475 RRS1Q15050 365 aaKnown RBP16.43■□□□□ 0.22
SNRPD1-204ENST00000582475 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
SNRPD1-204ENST00000582475 STRN4Q9NRL3 753 aa16.43■□□□□ 0.22
SNRPD1-204ENST00000582475 MARF1Q9Y4F3 1742 aaKnown RBP16.42■□□□□ 0.22
SNRPD1-204ENST00000582475 NSD2O96028 1365 aa16.42■□□□□ 0.22
SNRPD1-204ENST00000582475 TNNT2P45379 298 aaPredicted RBP16.42■□□□□ 0.22
SNRPD1-204ENST00000582475 AMPHP49418 695 aa16.42■□□□□ 0.22
SNRPD1-204ENST00000582475 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
SNRPD1-204ENST00000582475 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
SNRPD1-204ENST00000582475 RXRBP28702 533 aa16.41■□□□□ 0.22
SNRPD1-204ENST00000582475 VPS72Q15906 364 aa16.41■□□□□ 0.22
SNRPD1-204ENST00000582475 IP6K1Q92551 441 aa16.41■□□□□ 0.22
SNRPD1-204ENST00000582475 CCDC9Q9Y3X0 531 aaKnown RBP16.41■□□□□ 0.22
SNRPD1-204ENST00000582475 USP54Q70EL1 1684 aa16.4■□□□□ 0.22
SNRPD1-204ENST00000582475 NFAT5O94916 1531 aa16.4■□□□□ 0.22
SNRPD1-204ENST00000582475 RBM6P78332 1123 aaKnown RBP16.4■□□□□ 0.22
SNRPD1-204ENST00000582475 GJD4Q96KN9 370 aaPredicted RBP16.4■□□□□ 0.22
SNRPD1-204ENST00000582475 SSUH2Q9Y2M2 353 aa16.4■□□□□ 0.22
SNRPD1-204ENST00000582475 COL14A1Q05707 1796 aaKnown RBP16.39■□□□□ 0.21
SNRPD1-204ENST00000582475 KIF20BQ96Q89 1820 aa16.39■□□□□ 0.21
SNRPD1-204ENST00000582475 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
SNRPD1-204ENST00000582475 CAMTA1Q9Y6Y1 1673 aa16.38■□□□□ 0.21
SNRPD1-204ENST00000582475 HOXC9P31274 260 aa16.38■□□□□ 0.21
SNRPD1-204ENST00000582475 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
SNRPD1-204ENST00000582475 ATRNO75882 1429 aa16.37■□□□□ 0.21
SNRPD1-204ENST00000582475 PPM1GO15355 546 aaPredicted RBP16.37■□□□□ 0.21
SNRPD1-204ENST00000582475 CSB-PGBD3P0DP91 1061 aa16.37■□□□□ 0.21
SNRPD1-204ENST00000582475 LARP1Q6PKG0 1096 aaKnown RBP16.37■□□□□ 0.21
SNRPD1-204ENST00000582475 EMILIN1Q9Y6C2 1016 aa16.37■□□□□ 0.21
SNRPD1-204ENST00000582475 HSP90AB2PQ58FF8 381 aa16.35■□□□□ 0.21
SNRPD1-204ENST00000582475 TOM1L2Q6ZVM7 507 aa16.35■□□□□ 0.21
SNRPD1-204ENST00000582475 ANKRD24Q8TF21 1146 aa16.35■□□□□ 0.21
SNRPD1-204ENST00000582475 LTV1Q96GA3 475 aaPredicted RBP16.35■□□□□ 0.21
SNRPD1-204ENST00000582475 SPATA31A5Q5VU36 1347 aa16.35■□□□□ 0.21
SNRPD1-204ENST00000582475 SPATA31A7Q8IWB4 1347 aa16.35■□□□□ 0.21
SNRPD1-204ENST00000582475 NWD2Q9ULI1 1742 aa16.34■□□□□ 0.21
SNRPD1-204ENST00000582475 COL18A1P39060 1754 aa16.34■□□□□ 0.21
SNRPD1-204ENST00000582475 PIP4P2Q8N4L2 257 aa16.34■□□□□ 0.21
SNRPD1-204ENST00000582475 USP35Q9P2H5 1018 aa16.34■□□□□ 0.21
SNRPD1-204ENST00000582475 WDR17Q8IZU2 1322 aa16.34■□□□□ 0.21
SNRPD1-204ENST00000582475 PLCH1Q4KWH8 1693 aa16.34■□□□□ 0.21
SNRPD1-204ENST00000582475 SPATA31A1Q5TZJ5 1347 aa16.33■□□□□ 0.2
SNRPD1-204ENST00000582475 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.2
SNRPD1-204ENST00000582475 KIF24Q5T7B8 1368 aa16.32■□□□□ 0.2
SNRPD1-204ENST00000582475 ILDR2Q71H61 639 aa16.32■□□□□ 0.2
SNRPD1-204ENST00000582475 LMO7Q8WWI1 1683 aa16.32■□□□□ 0.2
SNRPD1-204ENST00000582475 CARD10Q9BWT7 1032 aa16.32■□□□□ 0.2
SNRPD1-204ENST00000582475 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 RTL1A6NKG5 1358 aa16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 FLT4P35916 1363 aa16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 ERBB3P21860 1342 aa16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 ONECUT3O60422 494 aaPredicted RBP16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 MTHFSP49914 203 aa16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 TCP11L2Q8N4U5 519 aa16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 NLRP2Q9NX02 1062 aa16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 LTN1O94822 1766 aa16.31■□□□□ 0.2
SNRPD1-204ENST00000582475 INSRP06213 1382 aa16.3■□□□□ 0.2
SNRPD1-204ENST00000582475 FAM98CQ17RN3 349 aaKnown RBP16.3■□□□□ 0.2
SNRPD1-204ENST00000582475 CLEC11AQ9Y240 323 aa16.3■□□□□ 0.2
SNRPD1-204ENST00000582475 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
SNRPD1-204ENST00000582475 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.3■□□□□ 0.2
SNRPD1-204ENST00000582475 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
SNRPD1-204ENST00000582475 ABCC6O95255 1503 aa16.29■□□□□ 0.2
SNRPD1-204ENST00000582475 CRB1P82279 1406 aa16.29■□□□□ 0.2
SNRPD1-204ENST00000582475 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
SNRPD1-204ENST00000582475 NRAPQ86VF7 1730 aa16.29■□□□□ 0.2
SNRPD1-204ENST00000582475 SPDYE1Q8NFV5 336 aaPredicted RBP16.29■□□□□ 0.2
SNRPD1-204ENST00000582475 BARGINQ6ZT62 677 aa16.28■□□□□ 0.2
SNRPD1-204ENST00000582475 SEPT12Q8IYM1 358 aa16.28■□□□□ 0.2
SNRPD1-204ENST00000582475 A0A0G2JS52 829 aa16.27■□□□□ 0.2
SNRPD1-204ENST00000582475 PPP2R1AP30153 589 aa16.27■□□□□ 0.2
SNRPD1-204ENST00000582475 MYT1Q01538 1121 aa16.27■□□□□ 0.2
SNRPD1-204ENST00000582475 RALBP1Q15311 655 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms