RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 NUDT16Q96DE0 195 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 CDCA7Q9BWT1 371 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 CRB1P82279 1406 aa12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ADGRB1O14514 1584 aa12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 BCL9O00512 1426 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 USP19O94966 1318 aa12.92□□□□□ -0.34
CDK5RAP3-224ENST00000582275 SLC15A2Q16348 729 aa12.92□□□□□ -0.34
CDK5RAP3-224ENST00000582275 PEAK1Q9H792 1746 aa12.92□□□□□ -0.34
CDK5RAP3-224ENST00000582275 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ARXQ96QS3 562 aa12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ACEP12821 1306 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 GCP02774 474 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 GPR162Q16538 588 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 TXNRD1Q16881 649 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
CDK5RAP3-224ENST00000582275 PROM2Q8N271 834 aa12.89□□□□□ -0.35
CDK5RAP3-224ENST00000582275 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
CDK5RAP3-224ENST00000582275 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-224ENST00000582275 TOM1L2Q6ZVM7 507 aa12.88□□□□□ -0.35
CDK5RAP3-224ENST00000582275 CDK19Q9BWU1 502 aa12.88□□□□□ -0.35
CDK5RAP3-224ENST00000582275 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
CDK5RAP3-224ENST00000582275 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-224ENST00000582275 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
CDK5RAP3-224ENST00000582275 EXOC5O00471 708 aa12.84□□□□□ -0.35
CDK5RAP3-224ENST00000582275 PTF1AQ7RTS3 328 aa12.84□□□□□ -0.35
CDK5RAP3-224ENST00000582275 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
CDK5RAP3-224ENST00000582275 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.35
CDK5RAP3-224ENST00000582275 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
CDK5RAP3-224ENST00000582275 POLD1P28340 1107 aa12.83□□□□□ -0.36
CDK5RAP3-224ENST00000582275 SLC16A10Q8TF71 515 aa12.83□□□□□ -0.36
CDK5RAP3-224ENST00000582275 GRIN3BO60391 1043 aa12.82□□□□□ -0.36
CDK5RAP3-224ENST00000582275 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
CDK5RAP3-224ENST00000582275 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
CDK5RAP3-224ENST00000582275 ARHGEF28Q8N1W1 1705 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-224ENST00000582275 DSG3P32926 999 aa12.81□□□□□ -0.36
CDK5RAP3-224ENST00000582275 NLRP6P59044 892 aa12.81□□□□□ -0.36
CDK5RAP3-224ENST00000582275 CARD10Q9BWT7 1032 aa12.81□□□□□ -0.36
CDK5RAP3-224ENST00000582275 UTRNP46939 3433 aa12.8□□□□□ -0.36
CDK5RAP3-224ENST00000582275 CSB-PGBD3P0DP91 1061 aa12.8□□□□□ -0.36
CDK5RAP3-224ENST00000582275 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-224ENST00000582275 CCDC7Q96M83 1385 aa12.8□□□□□ -0.36
CDK5RAP3-224ENST00000582275 WNK3Q9BYP7 1800 aa12.79□□□□□ -0.36
CDK5RAP3-224ENST00000582275 SLIT3O75094 1523 aa12.79□□□□□ -0.36
CDK5RAP3-224ENST00000582275 KCNH5Q8NCM2 988 aa12.79□□□□□ -0.36
CDK5RAP3-224ENST00000582275 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
CDK5RAP3-224ENST00000582275 SRPK2P78362 688 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-224ENST00000582275 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
CDK5RAP3-224ENST00000582275 ABCB7O75027 752 aa12.77□□□□□ -0.37
CDK5RAP3-224ENST00000582275 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-224ENST00000582275 TNS2Q63HR2 1409 aa12.77□□□□□ -0.37
CDK5RAP3-224ENST00000582275 HSPA6P17066 643 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 SLC27A3Q5K4L6 730 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 USP6P35125 1406 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 PAPPAQ13219 1627 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 NHSQ6T4R5 1651 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 COL18A1P39060 1754 aa12.75□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
CDK5RAP3-224ENST00000582275 GPBP1L1Q9HC44 474 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ZNF827Q17R98 1081 aa12.73□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ABCC6O95255 1503 aa12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ACSBG1Q96GR2 724 aa12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 TRPM1Q7Z4N2 1603 aa12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ATP10DQ9P241 1426 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 KAT6BQ8WYB5 2073 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 POLA2Q14181 598 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 CABP2Q9NPB3 220 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 TFCP2L1Q9NZI6 479 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 CABP1Q9NZU7 370 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.38
CDK5RAP3-224ENST00000582275 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 CENPJQ9HC77 1338 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 IL2RBP14784 551 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 HMGB2P26583 209 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 NLGN2Q8NFZ4 835 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 KIAA1210Q9ULL0 1709 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 BTAF1O14981 1849 aa12.69□□□□□ -0.38
CDK5RAP3-224ENST00000582275 PNPLA7Q6ZV29 1317 aa12.69□□□□□ -0.38
CDK5RAP3-224ENST00000582275 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP3-224ENST00000582275 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
CDK5RAP3-224ENST00000582275 PIK3C2AO00443 1686 aa12.68□□□□□ -0.38
CDK5RAP3-224ENST00000582275 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms