RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 COL5A2P05997 1499 aaPredicted RBP21.71■■□□□ 1.07
CCDC57-213ENST00000581625 UNC5CLQ8IV45 518 aa21.7■■□□□ 1.06
CCDC57-213ENST00000581625 FLT4P35916 1363 aa21.7■■□□□ 1.06
CCDC57-213ENST00000581625 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
CCDC57-213ENST00000581625 AMPHP49418 695 aa21.68■■□□□ 1.06
CCDC57-213ENST00000581625 PEAK1Q9H792 1746 aa21.67■■□□□ 1.06
CCDC57-213ENST00000581625 ATRNO75882 1429 aa21.67■■□□□ 1.06
CCDC57-213ENST00000581625 TNNT2P45379 298 aaPredicted RBP21.67■■□□□ 1.06
CCDC57-213ENST00000581625 IP6K1Q92551 441 aa21.67■■□□□ 1.06
CCDC57-213ENST00000581625 CDK12Q9NYV4 1490 aaPredicted RBP21.66■■□□□ 1.06
CCDC57-213ENST00000581625 PARD3Q8TEW0 1356 aa21.66■■□□□ 1.06
CCDC57-213ENST00000581625 HOXC9P31274 260 aa21.66■■□□□ 1.06
CCDC57-213ENST00000581625 TRPC5Q9UL62 973 aaPredicted RBP21.66■■□□□ 1.06
CCDC57-213ENST00000581625 FAM208AQ9UK61 1670 aaKnown RBP21.66■■□□□ 1.06
CCDC57-213ENST00000581625 MAP2P11137 1827 aaKnown RBP21.65■■□□□ 1.06
CCDC57-213ENST00000581625 FBLN1P23142 703 aa21.65■■□□□ 1.06
CCDC57-213ENST00000581625 POLKQ9UBT6 870 aa21.65■■□□□ 1.06
CCDC57-213ENST00000581625 EMILIN1Q9Y6C2 1016 aa21.65■■□□□ 1.06
CCDC57-213ENST00000581625 INSRP06213 1382 aa21.64■■□□□ 1.06
CCDC57-213ENST00000581625 ERBB3P21860 1342 aa21.64■■□□□ 1.05
CCDC57-213ENST00000581625 VPS72Q15906 364 aa21.64■■□□□ 1.05
CCDC57-213ENST00000581625 RGS17Q9UGC6 210 aaPredicted RBP21.64■■□□□ 1.05
CCDC57-213ENST00000581625 AXIN2Q9Y2T1 843 aa21.64■■□□□ 1.05
CCDC57-213ENST00000581625 WDR17Q8IZU2 1322 aa21.63■■□□□ 1.05
CCDC57-213ENST00000581625 EVA1CP58658 441 aa21.63■■□□□ 1.05
CCDC57-213ENST00000581625 RGPD5Q99666 1765 aa21.63■■□□□ 1.05
CCDC57-213ENST00000581625 CRB1P82279 1406 aa21.63■■□□□ 1.05
CCDC57-213ENST00000581625 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
CCDC57-213ENST00000581625 STRN4Q9NRL3 753 aa21.62■■□□□ 1.05
CCDC57-213ENST00000581625 RALBP1Q15311 655 aa21.61■■□□□ 1.05
CCDC57-213ENST00000581625 PPM1GO15355 546 aaPredicted RBP21.6■■□□□ 1.05
CCDC57-213ENST00000581625 ANKRD24Q8TF21 1146 aa21.6■■□□□ 1.05
CCDC57-213ENST00000581625 QTRT2Q9H974 415 aaKnown RBP21.6■■□□□ 1.05
CCDC57-213ENST00000581625 SPATA31A5Q5VU36 1347 aa21.58■■□□□ 1.05
CCDC57-213ENST00000581625 SPATA31A7Q8IWB4 1347 aa21.58■■□□□ 1.05
CCDC57-213ENST00000581625 GLI3P10071 1580 aa21.58■■□□□ 1.05
CCDC57-213ENST00000581625 CSB-PGBD3P0DP91 1061 aa21.58■■□□□ 1.05
CCDC57-213ENST00000581625 GJD4Q96KN9 370 aaPredicted RBP21.58■■□□□ 1.05
CCDC57-213ENST00000581625 CCDC9Q9Y3X0 531 aaKnown RBP21.58■■□□□ 1.05
CCDC57-213ENST00000581625 HSP90AB2PQ58FF8 381 aa21.57■■□□□ 1.04
CCDC57-213ENST00000581625 LARP1Q6PKG0 1096 aaKnown RBP21.57■■□□□ 1.04
CCDC57-213ENST00000581625 SPATA31A1Q5TZJ5 1347 aa21.56■■□□□ 1.04
CCDC57-213ENST00000581625 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
CCDC57-213ENST00000581625 MTHFSP49914 203 aa21.56■■□□□ 1.04
CCDC57-213ENST00000581625 RBM6P78332 1123 aaKnown RBP21.56■■□□□ 1.04
CCDC57-213ENST00000581625 POTEAQ6S8J7 498 aa21.56■■□□□ 1.04
CCDC57-213ENST00000581625 TOM1L2Q6ZVM7 507 aa21.56■■□□□ 1.04
CCDC57-213ENST00000581625 THRAP3Q9Y2W1 955 aaKnown RBP21.55■■□□□ 1.04
CCDC57-213ENST00000581625 RXRBP28702 533 aa21.54■■□□□ 1.04
CCDC57-213ENST00000581625 CARD10Q9BWT7 1032 aa21.54■■□□□ 1.04
CCDC57-213ENST00000581625 PRKRIP1Q9H875 184 aaPredicted RBP21.54■■□□□ 1.04
CCDC57-213ENST00000581625 MYBBP1AQ9BQG0 1328 aaKnown RBP21.54■■□□□ 1.04
CCDC57-213ENST00000581625 LTV1Q96GA3 475 aaPredicted RBP21.53■■□□□ 1.04
CCDC57-213ENST00000581625 TCP11L2Q8N4U5 519 aa21.52■■□□□ 1.04
CCDC57-213ENST00000581625 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
CCDC57-213ENST00000581625 WNK3Q9BYP7 1800 aa21.52■■□□□ 1.04
CCDC57-213ENST00000581625 COL3A1P02461 1466 aaPredicted RBP21.52■■□□□ 1.03
CCDC57-213ENST00000581625 BARGINQ6ZT62 677 aa21.51■■□□□ 1.03
CCDC57-213ENST00000581625 NLRP2Q9NX02 1062 aa21.51■■□□□ 1.03
CCDC57-213ENST00000581625 THSD7AQ9UPZ6 1657 aa21.5■■□□□ 1.03
CCDC57-213ENST00000581625 NCAPD2Q15021 1401 aa21.5■■□□□ 1.03
CCDC57-213ENST00000581625 EIF4A2Q14240 407 aaKnown RBP21.5■■□□□ 1.03
CCDC57-213ENST00000581625 ANP32CO43423 234 aa21.49■■□□□ 1.03
CCDC57-213ENST00000581625 USP35Q9P2H5 1018 aa21.49■■□□□ 1.03
CCDC57-213ENST00000581625 RGS12O14924 1447 aa21.48■■□□□ 1.03
CCDC57-213ENST00000581625 CDCA7Q9BWT1 371 aaPredicted RBP21.48■■□□□ 1.03
CCDC57-213ENST00000581625 DISP2A7MBM2 1401 aa21.47■■□□□ 1.03
CCDC57-213ENST00000581625 RGPD1P0DJD0 1748 aa21.47■■□□□ 1.03
CCDC57-213ENST00000581625 RGPD2P0DJD1 1756 aa21.46■■□□□ 1.03
CCDC57-213ENST00000581625 ONECUT3O60422 494 aaPredicted RBP21.46■■□□□ 1.03
CCDC57-213ENST00000581625 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
CCDC57-213ENST00000581625 FAM98CQ17RN3 349 aaKnown RBP21.46■■□□□ 1.03
CCDC57-213ENST00000581625 IGSF1Q8N6C5 1336 aa21.46■■□□□ 1.03
CCDC57-213ENST00000581625 PARP4Q9UKK3 1724 aaKnown RBP21.46■■□□□ 1.03
CCDC57-213ENST00000581625 IL13P35225 146 aa21.45■■□□□ 1.02
CCDC57-213ENST00000581625 NBPF6Q5VWK0 638 aa21.45■■□□□ 1.02
CCDC57-213ENST00000581625 NBPF4Q96M43 638 aa21.45■■□□□ 1.02
CCDC57-213ENST00000581625 PLEKHG2Q9H7P9 1386 aa21.45■■□□□ 1.02
CCDC57-213ENST00000581625 LRRC37A3O60309 1634 aa21.44■■□□□ 1.02
CCDC57-213ENST00000581625 EYA1Q99502 592 aa21.43■■□□□ 1.02
CCDC57-213ENST00000581625 A0A0G2JS52 829 aa21.42■■□□□ 1.02
CCDC57-213ENST00000581625 IL2RBP14784 551 aa21.42■■□□□ 1.02
CCDC57-213ENST00000581625 MYT1Q01538 1121 aa21.42■■□□□ 1.02
CCDC57-213ENST00000581625 TNS2Q63HR2 1409 aa21.41■■□□□ 1.02
CCDC57-213ENST00000581625 KDRP35968 1356 aa21.41■■□□□ 1.02
CCDC57-213ENST00000581625 NUDCQ9Y266 331 aa21.41■■□□□ 1.02
CCDC57-213ENST00000581625 MEGF6O75095 1541 aa21.4■■□□□ 1.02
CCDC57-213ENST00000581625 OVOS2A0A0G2JMS6 1433 aa21.4■■□□□ 1.02
CCDC57-213ENST00000581625 SEPT12Q8IYM1 358 aa21.4■■□□□ 1.02
CCDC57-213ENST00000581625 USHBP1Q8N6Y0 703 aa21.4■■□□□ 1.02
CCDC57-213ENST00000581625 RAPGEF4Q8WZA2 1011 aa21.4■■□□□ 1.02
CCDC57-213ENST00000581625 TATP17735 454 aaPredicted RBP21.37■■□□□ 1.01
CCDC57-213ENST00000581625 U2SURPO15042 1029 aaKnown RBP21.36■■□□□ 1.01
CCDC57-213ENST00000581625 DDB1Q16531 1140 aa21.36■■□□□ 1.01
CCDC57-213ENST00000581625 DIEXFQ68CQ4 756 aaKnown RBP21.36■■□□□ 1.01
CCDC57-213ENST00000581625 PKD1L3Q7Z443 1732 aa21.35■■□□□ 1.01
CCDC57-213ENST00000581625 SULT6B1Q6IMI4 303 aa21.35■■□□□ 1.01
CCDC57-213ENST00000581625 BRWD3Q6RI45 1802 aa21.34■■□□□ 1.01
CCDC57-213ENST00000581625 EXOC5O00471 708 aa21.33■■□□□ 1.01
CCDC57-213ENST00000581625 KRT27Q7Z3Y8 459 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms