RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 AXIN2Q9Y2T1 843 aa20.55■□□□□ 0.88
MKS1-210ENST00000581180 PARD3Q8TEW0 1356 aa20.55■□□□□ 0.88
MKS1-210ENST00000581180 SMG6Q86US8 1419 aaKnown RBP20.54■□□□□ 0.88
MKS1-210ENST00000581180 CNGB1Q14028 1251 aaPredicted RBP20.54■□□□□ 0.88
MKS1-210ENST00000581180 IP6K1Q92551 441 aa20.54■□□□□ 0.88
MKS1-210ENST00000581180 RGS17Q9UGC6 210 aaPredicted RBP20.54■□□□□ 0.88
MKS1-210ENST00000581180 EMILIN1Q9Y6C2 1016 aa20.54■□□□□ 0.88
MKS1-210ENST00000581180 RTL1A6NKG5 1358 aa20.54■□□□□ 0.88
MKS1-210ENST00000581180 KIF24Q5T7B8 1368 aa20.54■□□□□ 0.88
MKS1-210ENST00000581180 USP21Q9UK80 565 aa20.53■□□□□ 0.88
MKS1-210ENST00000581180 COL5A2P05997 1499 aaPredicted RBP20.52■□□□□ 0.88
MKS1-210ENST00000581180 HOXC9P31274 260 aa20.52■□□□□ 0.88
MKS1-210ENST00000581180 UNC5CLQ8IV45 518 aa20.52■□□□□ 0.88
MKS1-210ENST00000581180 BLMP54132 1417 aaPredicted RBP20.52■□□□□ 0.87
MKS1-210ENST00000581180 FLT4P35916 1363 aa20.51■□□□□ 0.87
MKS1-210ENST00000581180 AMPHP49418 695 aa20.51■□□□□ 0.87
MKS1-210ENST00000581180 ATRNO75882 1429 aa20.5■□□□□ 0.87
MKS1-210ENST00000581180 RGPD2P0DJD1 1756 aa20.49■□□□□ 0.87
MKS1-210ENST00000581180 ZNF772Q68DY9 489 aaPredicted RBP20.49■□□□□ 0.87
MKS1-210ENST00000581180 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
MKS1-210ENST00000581180 INSRP06213 1382 aa20.48■□□□□ 0.87
MKS1-210ENST00000581180 RALBP1Q15311 655 aa20.48■□□□□ 0.87
MKS1-210ENST00000581180 HSP90AB2PQ58FF8 381 aa20.48■□□□□ 0.87
MKS1-210ENST00000581180 CDK12Q9NYV4 1490 aaPredicted RBP20.48■□□□□ 0.87
MKS1-210ENST00000581180 FAM208AQ9UK61 1670 aaKnown RBP20.48■□□□□ 0.87
MKS1-210ENST00000581180 PPP2R1AP30153 589 aa20.47■□□□□ 0.87
MKS1-210ENST00000581180 ERBB3P21860 1342 aa20.47■□□□□ 0.87
MKS1-210ENST00000581180 MTHFSP49914 203 aa20.46■□□□□ 0.87
MKS1-210ENST00000581180 VPS72Q15906 364 aa20.46■□□□□ 0.87
MKS1-210ENST00000581180 PRKRIP1Q9H875 184 aaPredicted RBP20.46■□□□□ 0.87
MKS1-210ENST00000581180 STRN4Q9NRL3 753 aa20.46■□□□□ 0.87
MKS1-210ENST00000581180 TRPC5Q9UL62 973 aaPredicted RBP20.46■□□□□ 0.87
MKS1-210ENST00000581180 PPM1GO15355 546 aaPredicted RBP20.45■□□□□ 0.86
MKS1-210ENST00000581180 EVA1CP58658 441 aa20.45■□□□□ 0.86
MKS1-210ENST00000581180 ANKRD24Q8TF21 1146 aa20.45■□□□□ 0.86
MKS1-210ENST00000581180 QTRT2Q9H974 415 aaKnown RBP20.45■□□□□ 0.86
MKS1-210ENST00000581180 WDR17Q8IZU2 1322 aa20.45■□□□□ 0.86
MKS1-210ENST00000581180 GLI3P10071 1580 aa20.44■□□□□ 0.86
MKS1-210ENST00000581180 LARP1Q6PKG0 1096 aaKnown RBP20.44■□□□□ 0.86
MKS1-210ENST00000581180 POTEAQ6S8J7 498 aa20.44■□□□□ 0.86
MKS1-210ENST00000581180 SPATA31A5Q5VU36 1347 aa20.43■□□□□ 0.86
MKS1-210ENST00000581180 SPATA31A7Q8IWB4 1347 aa20.43■□□□□ 0.86
MKS1-210ENST00000581180 CRB1P82279 1406 aa20.43■□□□□ 0.86
MKS1-210ENST00000581180 COL3A1P02461 1466 aaPredicted RBP20.42■□□□□ 0.86
MKS1-210ENST00000581180 LTV1Q96GA3 475 aaPredicted RBP20.41■□□□□ 0.86
MKS1-210ENST00000581180 GJD4Q96KN9 370 aaPredicted RBP20.41■□□□□ 0.86
MKS1-210ENST00000581180 SPATA31A1Q5TZJ5 1347 aa20.41■□□□□ 0.86
MKS1-210ENST00000581180 WNK3Q9BYP7 1800 aa20.41■□□□□ 0.86
MKS1-210ENST00000581180 CSB-PGBD3P0DP91 1061 aa20.4■□□□□ 0.86
MKS1-210ENST00000581180 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
MKS1-210ENST00000581180 EIF4A2Q14240 407 aaKnown RBP20.39■□□□□ 0.85
MKS1-210ENST00000581180 TOM1L2Q6ZVM7 507 aa20.39■□□□□ 0.85
MKS1-210ENST00000581180 CARD10Q9BWT7 1032 aa20.39■□□□□ 0.85
MKS1-210ENST00000581180 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.85
MKS1-210ENST00000581180 RBM6P78332 1123 aaKnown RBP20.38■□□□□ 0.85
MKS1-210ENST00000581180 CCDC9Q9Y3X0 531 aaKnown RBP20.37■□□□□ 0.85
MKS1-210ENST00000581180 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
MKS1-210ENST00000581180 ANP32CO43423 234 aa20.36■□□□□ 0.85
MKS1-210ENST00000581180 IL13P35225 146 aa20.36■□□□□ 0.85
MKS1-210ENST00000581180 NBPF6Q5VWK0 638 aa20.36■□□□□ 0.85
MKS1-210ENST00000581180 NBPF4Q96M43 638 aa20.36■□□□□ 0.85
MKS1-210ENST00000581180 NLRP2Q9NX02 1062 aa20.36■□□□□ 0.85
MKS1-210ENST00000581180 RXRBP28702 533 aa20.35■□□□□ 0.85
MKS1-210ENST00000581180 TCP11L2Q8N4U5 519 aa20.35■□□□□ 0.85
MKS1-210ENST00000581180 THRAP3Q9Y2W1 955 aaKnown RBP20.35■□□□□ 0.85
MKS1-210ENST00000581180 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
MKS1-210ENST00000581180 ONECUT3O60422 494 aaPredicted RBP20.34■□□□□ 0.85
MKS1-210ENST00000581180 BARGINQ6ZT62 677 aa20.34■□□□□ 0.85
MKS1-210ENST00000581180 EYA1Q99502 592 aa20.34■□□□□ 0.85
MKS1-210ENST00000581180 USP35Q9P2H5 1018 aa20.34■□□□□ 0.85
MKS1-210ENST00000581180 DIAPH1O60610 1272 aaKnown RBP20.33■□□□□ 0.85
MKS1-210ENST00000581180 CFAP53Q96M91 514 aa20.33■□□□□ 0.85
MKS1-210ENST00000581180 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.84
MKS1-210ENST00000581180 BRWD3Q6RI45 1802 aa20.32■□□□□ 0.84
MKS1-210ENST00000581180 IGSF1Q8N6C5 1336 aa20.32■□□□□ 0.84
MKS1-210ENST00000581180 DISP2A7MBM2 1401 aa20.32■□□□□ 0.84
MKS1-210ENST00000581180 DIEXFQ68CQ4 756 aaKnown RBP20.31■□□□□ 0.84
MKS1-210ENST00000581180 FAM98CQ17RN3 349 aaKnown RBP20.3■□□□□ 0.84
MKS1-210ENST00000581180 USHBP1Q8N6Y0 703 aa20.3■□□□□ 0.84
MKS1-210ENST00000581180 RGS12O14924 1447 aa20.28■□□□□ 0.84
MKS1-210ENST00000581180 LRRC37A3O60309 1634 aa20.27■□□□□ 0.84
MKS1-210ENST00000581180 KDRP35968 1356 aa20.27■□□□□ 0.84
MKS1-210ENST00000581180 CDCA7Q9BWT1 371 aaPredicted RBP20.27■□□□□ 0.84
MKS1-210ENST00000581180 MEGF6O75095 1541 aa20.27■□□□□ 0.83
MKS1-210ENST00000581180 IL2RBP14784 551 aa20.26■□□□□ 0.83
MKS1-210ENST00000581180 SEPT12Q8IYM1 358 aa20.26■□□□□ 0.83
MKS1-210ENST00000581180 SHANK3Q9BYB0 1731 aa20.25■□□□□ 0.83
MKS1-210ENST00000581180 CCDC184Q52MB2 194 aa20.25■□□□□ 0.83
MKS1-210ENST00000581180 AEBP1Q8IUX7 1158 aa20.25■□□□□ 0.83
MKS1-210ENST00000581180 PKD1L3Q7Z443 1732 aa20.24■□□□□ 0.83
MKS1-210ENST00000581180 SULT6B1Q6IMI4 303 aa20.24■□□□□ 0.83
MKS1-210ENST00000581180 NUDCQ9Y266 331 aa20.24■□□□□ 0.83
MKS1-210ENST00000581180 OVOS2A0A0G2JMS6 1433 aa20.23■□□□□ 0.83
MKS1-210ENST00000581180 U2SURPO15042 1029 aaKnown RBP20.23■□□□□ 0.83
MKS1-210ENST00000581180 RAPGEF4Q8WZA2 1011 aa20.21■□□□□ 0.83
MKS1-210ENST00000581180 PLEKHG2Q9H7P9 1386 aa20.21■□□□□ 0.83
MKS1-210ENST00000581180 TNS2Q63HR2 1409 aa20.2■□□□□ 0.82
MKS1-210ENST00000581180 HMOX1P09601 288 aa20.2■□□□□ 0.82
MKS1-210ENST00000581180 TATP17735 454 aaPredicted RBP20.2■□□□□ 0.82
MKS1-210ENST00000581180 A0A0G2JS52 829 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms