RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 ABCC11Q96J66 1382 aa5.26□□□□□ -1.57
RTTN-206ENST00000581161 TPM3P06753 285 aa5.26□□□□□ -1.57
RTTN-206ENST00000581161 BCL2L13Q9BXK5 485 aa5.26□□□□□ -1.57
RTTN-206ENST00000581161 NEXNQ0ZGT2 675 aa5.26□□□□□ -1.57
RTTN-206ENST00000581161 PPM1FP49593 454 aaPredicted RBP5.26□□□□□ -1.57
RTTN-206ENST00000581161 MFAP1P55081 439 aaKnown RBP5.26□□□□□ -1.57
RTTN-206ENST00000581161 DUSP27Q5VZP5 1158 aa5.26□□□□□ -1.57
RTTN-206ENST00000581161 COL18A1P39060 1754 aa5.26□□□□□ -1.57
RTTN-206ENST00000581161 ZRSR2Q15696 482 aaKnown RBP5.26□□□□□ -1.57
RTTN-206ENST00000581161 YTHDC2Q9H6S0 1430 aaKnown RBP5.26□□□□□ -1.57
RTTN-206ENST00000581161 E9PSI1 815 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 MARCH6O60337 910 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 WWC2Q6AWC2 1192 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 ADAMTSL3P82987 1691 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 CCDC97Q96F63 343 aaPredicted RBP5.25□□□□□ -1.57
RTTN-206ENST00000581161 IGHDP01880 384 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 DDIT3P35638 169 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 SLFN5Q08AF3 891 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 CHMP4BQ9H444 224 aaKnown RBP5.25□□□□□ -1.57
RTTN-206ENST00000581161 PIK3C2AO00443 1686 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 ALS2Q96Q42 1657 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 RDXP35241 583 aaKnown RBP5.25□□□□□ -1.57
RTTN-206ENST00000581161 ATP7BP35670 1465 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 CCDC70Q6NSX1 233 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 CGNL1Q0VF96 1302 aa5.25□□□□□ -1.57
RTTN-206ENST00000581161 FTSJ3Q8IY81 847 aaKnown RBP5.24□□□□□ -1.57
RTTN-206ENST00000581161 TPM2P07951 284 aa5.24□□□□□ -1.57
RTTN-206ENST00000581161 PTMSP20962 102 aa5.24□□□□□ -1.57
RTTN-206ENST00000581161 WWC1Q8IX03 1113 aa5.24□□□□□ -1.57
RTTN-206ENST00000581161 RASSF8Q8NHQ8 419 aa5.24□□□□□ -1.57
RTTN-206ENST00000581161 NKTRP30414 1462 aaKnown RBP5.24□□□□□ -1.57
RTTN-206ENST00000581161 FAM208AQ9UK61 1670 aaKnown RBP5.24□□□□□ -1.57
RTTN-206ENST00000581161 RWDD1Q9H446 243 aaPredicted RBP5.24□□□□□ -1.57
RTTN-206ENST00000581161 MAPK8IP3Q9UPT6 1336 aa5.24□□□□□ -1.57
RTTN-206ENST00000581161 EIF3AQ14152 1382 aaKnown RBP5.24□□□□□ -1.57
RTTN-206ENST00000581161 CDR1P51861 262 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 MORC1Q86VD1 984 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 IL17RAQ96F46 866 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 AFAP1Q8N556 730 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 PMFBP1Q8TBY8 1022 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 UBE2Q2Q8WVN8 375 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 BCCIPQ9P287 314 aaKnown RBP eCLIP5.23□□□□□ -1.57
RTTN-206ENST00000581161 DMRT2Q9Y5R5 561 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 HSCBQ8IWL3 235 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 SPINK5Q9NQ38 1064 aaPredicted RBP5.23□□□□□ -1.57
RTTN-206ENST00000581161 CEP170BQ9Y4F5 1589 aaPredicted RBP5.23□□□□□ -1.57
RTTN-206ENST00000581161 HMGB1P1B2RPK0 211 aaPredicted RBP5.23□□□□□ -1.57
RTTN-206ENST00000581161 SEC24BO95487 1268 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 FOXD4L1Q9NU39 408 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 KDM3BQ7LBC6 1761 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 XIRP1Q702N8 1843 aaKnown RBP5.23□□□□□ -1.57
RTTN-206ENST00000581161 CHD2O14647 1828 aaKnown RBP5.23□□□□□ -1.57
RTTN-206ENST00000581161 MCCP23508 829 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 ZNF710Q8N1W2 664 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 PDZRN3Q9UPQ7 1066 aa5.23□□□□□ -1.57
RTTN-206ENST00000581161 R3HCC1Q9Y3T6 440 aaKnown RBP5.23□□□□□ -1.57
RTTN-206ENST00000581161 FMN2Q9NZ56 1722 aa5.22□□□□□ -1.57
RTTN-206ENST00000581161 TAF7LQ5H9L4 462 aa5.22□□□□□ -1.57
RTTN-206ENST00000581161 ITPRIPQ8IWB1 547 aa5.22□□□□□ -1.57
RTTN-206ENST00000581161 CCDC112Q8NEF3 446 aa5.22□□□□□ -1.57
RTTN-206ENST00000581161 KIF1AQ12756 1690 aa5.22□□□□□ -1.57
RTTN-206ENST00000581161 NEFHP12036 1026 aa5.22□□□□□ -1.57
RTTN-206ENST00000581161 MEX3CQ5U5Q3 659 aaKnown RBP5.22□□□□□ -1.57
RTTN-206ENST00000581161 TRIM34Q9BYJ4 488 aa5.22□□□□□ -1.57
RTTN-206ENST00000581161 NHSL1Q5SYE7 1610 aa5.22□□□□□ -1.57
RTTN-206ENST00000581161 C14orf93Q9H972 538 aaKnown RBP5.21□□□□□ -1.57
RTTN-206ENST00000581161 CFAP53Q96M91 514 aa5.21□□□□□ -1.58
RTTN-206ENST00000581161 SHANK3Q9BYB0 1731 aa5.21□□□□□ -1.58
RTTN-206ENST00000581161 OVOS2A0A0J9YW53 1432 aa5.21□□□□□ -1.58
RTTN-206ENST00000581161 OVOS2Q6IE36 1432 aa5.21□□□□□ -1.58
RTTN-206ENST00000581161 HSP90AB1P08238 724 aaKnown RBP5.21□□□□□ -1.58
RTTN-206ENST00000581161 BRPF1P55201 1214 aaPredicted RBP5.21□□□□□ -1.58
RTTN-206ENST00000581161 NFAT5O94916 1531 aa5.21□□□□□ -1.58
RTTN-206ENST00000581161 PLEKHF1Q96S99 279 aa5.21□□□□□ -1.58
RTTN-206ENST00000581161 RRAGDQ9NQL2 400 aaPredicted RBP5.21□□□□□ -1.58
RTTN-206ENST00000581161 TMEM94Q12767 1356 aa5.21□□□□□ -1.58
RTTN-206ENST00000581161 TNNQ9UQP3 1299 aa5.21□□□□□ -1.58
RTTN-206ENST00000581161 ODF2Q5BJF6 829 aa5.2□□□□□ -1.58
RTTN-206ENST00000581161 CFAP44Q96MT7 982 aa5.2□□□□□ -1.58
RTTN-206ENST00000581161 MSNP26038 577 aaKnown RBP5.2□□□□□ -1.58
RTTN-206ENST00000581161 TSR1Q2NL82 804 aaKnown RBP5.2□□□□□ -1.58
RTTN-206ENST00000581161 TBC1D2Q9BYX2 928 aa5.2□□□□□ -1.58
RTTN-206ENST00000581161 PDE3AQ14432 1141 aa5.2□□□□□ -1.58
RTTN-206ENST00000581161 U2SURPO15042 1029 aaKnown RBP5.2□□□□□ -1.58
RTTN-206ENST00000581161 U2AF1L5P0DN76 240 aaPredicted RBP5.2□□□□□ -1.58
RTTN-206ENST00000581161 U2AF1Q01081 240 aaKnown RBP eCLIP5.2□□□□□ -1.58
RTTN-206ENST00000581161 GRIPAP1Q4V328 841 aa5.2□□□□□ -1.58
RTTN-206ENST00000581161 C22orf23Q9BZE7 217 aa5.2□□□□□ -1.58
RTTN-206ENST00000581161 SMC4Q9NTJ3 1288 aa5.2□□□□□ -1.58
RTTN-206ENST00000581161 STRCP1A6NGW2 1772 aa5.2□□□□□ -1.58
RTTN-206ENST00000581161 BBXQ8WY36 941 aaPredicted RBP5.19□□□□□ -1.58
RTTN-206ENST00000581161 GPS2Q13227 327 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 LMOD2Q6P5Q4 547 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 ANKRD18AQ8IVF6 992 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 CCDC191Q8NCU4 936 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 ADGRF5Q8IZF2 1346 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 TRAK2O60296 914 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 HSP90AA2PQ14568 343 aaPredicted RBP5.19□□□□□ -1.58
RTTN-206ENST00000581161 PANK2Q9BZ23 570 aa5.19□□□□□ -1.58
RTTN-206ENST00000581161 CHMP5Q9NZZ3 219 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms