RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 PDGFDQ9GZP0 370 aaPredicted RBP14.33□□□□□ -0.12
RFFL-208ENST00000581039 STK32BQ9NY57 414 aa14.33□□□□□ -0.12
RFFL-208ENST00000581039 EXOC5O00471 708 aa14.32□□□□□ -0.12
RFFL-208ENST00000581039 KCNH5Q8NCM2 988 aa14.32□□□□□ -0.12
RFFL-208ENST00000581039 ZNF692Q9BU19 519 aaPredicted RBP14.32□□□□□ -0.12
RFFL-208ENST00000581039 ATF5Q9Y2D1 282 aaPredicted RBP14.32□□□□□ -0.12
RFFL-208ENST00000581039 KIAA1210Q9ULL0 1709 aa14.32□□□□□ -0.12
RFFL-208ENST00000581039 SOX12O15370 315 aa14.31□□□□□ -0.12
RFFL-208ENST00000581039 TXNRD1Q16881 649 aa14.31□□□□□ -0.12
RFFL-208ENST00000581039 ARHGEF25Q86VW2 580 aa14.31□□□□□ -0.12
RFFL-208ENST00000581039 CARD10Q9BWT7 1032 aa14.31□□□□□ -0.12
RFFL-208ENST00000581039 EVC2Q86UK5 1308 aa14.31□□□□□ -0.12
RFFL-208ENST00000581039 PEAK1Q9H792 1746 aa14.3□□□□□ -0.12
RFFL-208ENST00000581039 BCL9O00512 1426 aa14.3□□□□□ -0.12
RFFL-208ENST00000581039 PTGER2P43116 358 aa14.29□□□□□ -0.12
RFFL-208ENST00000581039 SLC15A2Q16348 729 aa14.29□□□□□ -0.12
RFFL-208ENST00000581039 TTC21BQ7Z4L5 1316 aa14.29□□□□□ -0.12
RFFL-208ENST00000581039 SLIT3O75094 1523 aa14.29□□□□□ -0.12
RFFL-208ENST00000581039 LRRC37A3O60309 1634 aa14.28□□□□□ -0.12
RFFL-208ENST00000581039 RGPD3A6NKT7 1758 aaPredicted RBP14.27□□□□□ -0.12
RFFL-208ENST00000581039 RGPD4Q7Z3J3 1758 aa14.27□□□□□ -0.12
RFFL-208ENST00000581039 CPSF1Q10570 1443 aaKnown RBP14.27□□□□□ -0.12
RFFL-208ENST00000581039 SYT17Q9BSW7 474 aa14.27□□□□□ -0.13
RFFL-208ENST00000581039 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
RFFL-208ENST00000581039 ZNF784Q8NCA9 323 aaPredicted RBP14.26□□□□□ -0.13
RFFL-208ENST00000581039 FHDC1Q9C0D6 1143 aaPredicted RBP14.26□□□□□ -0.13
RFFL-208ENST00000581039 MTFR1LQ9H019 292 aa14.26□□□□□ -0.13
RFFL-208ENST00000581039 SBF2Q86WG5 1849 aa14.26□□□□□ -0.13
RFFL-208ENST00000581039 CCDC7Q96M83 1385 aa14.25□□□□□ -0.13
RFFL-208ENST00000581039 COL18A1P39060 1754 aa14.24□□□□□ -0.13
RFFL-208ENST00000581039 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
RFFL-208ENST00000581039 CASZ1Q86V15 1759 aa14.24□□□□□ -0.13
RFFL-208ENST00000581039 QRICH2Q9H0J4 1663 aa14.23□□□□□ -0.13
RFFL-208ENST00000581039 ACSBG1Q96GR2 724 aa14.23□□□□□ -0.13
RFFL-208ENST00000581039 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
RFFL-208ENST00000581039 PIK3C2AO00443 1686 aa14.23□□□□□ -0.13
RFFL-208ENST00000581039 KTN1Q86UP2 1357 aaKnown RBP14.22□□□□□ -0.13
RFFL-208ENST00000581039 ARXQ96QS3 562 aa14.22□□□□□ -0.13
RFFL-208ENST00000581039 SGIP1Q9BQI5 828 aa14.21□□□□□ -0.13
RFFL-208ENST00000581039 IL2RBP14784 551 aa14.2□□□□□ -0.14
RFFL-208ENST00000581039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.2□□□□□ -0.14
RFFL-208ENST00000581039 MYOM1P52179 1685 aa14.2□□□□□ -0.14
RFFL-208ENST00000581039 AKAP12Q02952 1782 aa14.19□□□□□ -0.14
RFFL-208ENST00000581039 TNS2Q63HR2 1409 aa14.19□□□□□ -0.14
RFFL-208ENST00000581039 ROCK2O75116 1388 aaKnown RBP14.19□□□□□ -0.14
RFFL-208ENST00000581039 TRPM1Q7Z4N2 1603 aa14.18□□□□□ -0.14
RFFL-208ENST00000581039 WNK3Q9BYP7 1800 aa14.18□□□□□ -0.14
RFFL-208ENST00000581039 ERBB3P21860 1342 aa14.17□□□□□ -0.14
RFFL-208ENST00000581039 RGPD5Q99666 1765 aa14.17□□□□□ -0.14
RFFL-208ENST00000581039 UTRNP46939 3433 aa14.17□□□□□ -0.14
RFFL-208ENST00000581039 GPR162Q16538 588 aa14.17□□□□□ -0.14
RFFL-208ENST00000581039 NFAT5O94916 1531 aa14.16□□□□□ -0.14
RFFL-208ENST00000581039 SENP3-EIF4A1A0A087X0R7 540 aa14.16□□□□□ -0.14
RFFL-208ENST00000581039 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
RFFL-208ENST00000581039 NME9Q86XW9 330 aa14.16□□□□□ -0.14
RFFL-208ENST00000581039 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
RFFL-208ENST00000581039 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
RFFL-208ENST00000581039 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
RFFL-208ENST00000581039 USP31Q70CQ4 1352 aa14.16□□□□□ -0.14
RFFL-208ENST00000581039 POLD1P28340 1107 aa14.15□□□□□ -0.14
RFFL-208ENST00000581039 C1QTNF8P60827 252 aa14.15□□□□□ -0.14
RFFL-208ENST00000581039 ZNF827Q17R98 1081 aa14.15□□□□□ -0.14
RFFL-208ENST00000581039 HDGFL2Q7Z4V5 671 aaPredicted RBP14.15□□□□□ -0.14
RFFL-208ENST00000581039 SLC16A10Q8TF71 515 aa14.15□□□□□ -0.14
RFFL-208ENST00000581039 LRRC4BQ9NT99 713 aa14.15□□□□□ -0.14
RFFL-208ENST00000581039 ABCC6O95255 1503 aa14.15□□□□□ -0.14
RFFL-208ENST00000581039 MAP3K5Q99683 1374 aa14.14□□□□□ -0.15
RFFL-208ENST00000581039 SLC27A3Q5K4L6 730 aa14.14□□□□□ -0.15
RFFL-208ENST00000581039 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
RFFL-208ENST00000581039 DDX54Q8TDD1 881 aaKnown RBP14.14□□□□□ -0.15
RFFL-208ENST00000581039 AKT1S1Q96B36 256 aa14.13□□□□□ -0.15
RFFL-208ENST00000581039 NHSQ6T4R5 1651 aa14.13□□□□□ -0.15
RFFL-208ENST00000581039 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
RFFL-208ENST00000581039 TFCP2L1Q9NZI6 479 aa14.12□□□□□ -0.15
RFFL-208ENST00000581039 SBNO2Q9Y2G9 1366 aa14.11□□□□□ -0.15
RFFL-208ENST00000581039 SYTL4Q96C24 671 aaPredicted RBP14.11□□□□□ -0.15
RFFL-208ENST00000581039 LTV1Q96GA3 475 aaPredicted RBP14.11□□□□□ -0.15
RFFL-208ENST00000581039 SLC12A5Q9H2X9 1139 aa14.11□□□□□ -0.15
RFFL-208ENST00000581039 TERF2IPQ9NYB0 399 aa14.11□□□□□ -0.15
RFFL-208ENST00000581039 KAT6BQ8WYB5 2073 aa14.11□□□□□ -0.15
RFFL-208ENST00000581039 IP6K1Q92551 441 aa14.1□□□□□ -0.15
RFFL-208ENST00000581039 PRIM1P49642 420 aaKnown RBP14.09□□□□□ -0.15
RFFL-208ENST00000581039 CARD11Q9BXL7 1154 aa14.09□□□□□ -0.15
RFFL-208ENST00000581039 CHD4Q14839 1912 aa14.09□□□□□ -0.15
RFFL-208ENST00000581039 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
RFFL-208ENST00000581039 PAPPAQ13219 1627 aa14.08□□□□□ -0.15
RFFL-208ENST00000581039 GIGYF1O75420 1035 aaPredicted RBP14.08□□□□□ -0.16
RFFL-208ENST00000581039 KCNQ4P56696 695 aa14.08□□□□□ -0.16
RFFL-208ENST00000581039 CD163L1Q9NR16 1453 aa14.07□□□□□ -0.16
RFFL-208ENST00000581039 BTAF1O14981 1849 aa14.07□□□□□ -0.16
RFFL-208ENST00000581039 MON2Q7Z3U7 1717 aa14.07□□□□□ -0.16
RFFL-208ENST00000581039 EDC4Q6P2E9 1401 aaKnown RBP14.07□□□□□ -0.16
RFFL-208ENST00000581039 MSH5O43196 834 aa14.06□□□□□ -0.16
RFFL-208ENST00000581039 ZCRB1Q8TBF4 217 aaKnown RBP14.06□□□□□ -0.16
RFFL-208ENST00000581039 GRIN3BO60391 1043 aa14.05□□□□□ -0.16
RFFL-208ENST00000581039 AMPHP49418 695 aa14.05□□□□□ -0.16
RFFL-208ENST00000581039 NLGN2Q8NFZ4 835 aa14.05□□□□□ -0.16
RFFL-208ENST00000581039 COG3Q96JB2 828 aa14.05□□□□□ -0.16
RFFL-208ENST00000581039 PUS7Q96PZ0 661 aaKnown RBP14.05□□□□□ -0.16
RFFL-208ENST00000581039 CCNL1Q9UK58 526 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms