RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 ZNF827Q17R98 1081 aa21.23■□□□□ 0.99
CSNK1D-213ENST00000580446 GPBP1L1Q9HC44 474 aaPredicted RBP21.23■□□□□ 0.99
CSNK1D-213ENST00000580446 WASLO00401 505 aaPredicted RBP21.22■□□□□ 0.99
CSNK1D-213ENST00000580446 CRB1P82279 1406 aa21.21■□□□□ 0.99
CSNK1D-213ENST00000580446 COL13A1Q5TAT6 717 aaPredicted RBP21.2■□□□□ 0.98
CSNK1D-213ENST00000580446 CPDO75976 1380 aa21.18■□□□□ 0.98
CSNK1D-213ENST00000580446 TOM1L2Q6ZVM7 507 aa21.17■□□□□ 0.98
CSNK1D-213ENST00000580446 ABTB2Q8N961 1025 aa21.17■□□□□ 0.98
CSNK1D-213ENST00000580446 EIF3AQ14152 1382 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-213ENST00000580446 ACSBG1Q96GR2 724 aa21.16■□□□□ 0.98
CSNK1D-213ENST00000580446 NUDT16Q96DE0 195 aaKnown RBP21.15■□□□□ 0.98
CSNK1D-213ENST00000580446 USP19O94966 1318 aa21.13■□□□□ 0.97
CSNK1D-213ENST00000580446 POLD1P28340 1107 aa21.13■□□□□ 0.97
CSNK1D-213ENST00000580446 PAPPAQ13219 1627 aa21.12■□□□□ 0.97
CSNK1D-213ENST00000580446 ACEP12821 1306 aa21.12■□□□□ 0.97
CSNK1D-213ENST00000580446 GCP02774 474 aa21.12■□□□□ 0.97
CSNK1D-213ENST00000580446 GRIN3BO60391 1043 aa21.11■□□□□ 0.97
CSNK1D-213ENST00000580446 LRRC4BQ9NT99 713 aa21.1■□□□□ 0.97
CSNK1D-213ENST00000580446 AATKQ6ZMQ8 1374 aa21.1■□□□□ 0.97
CSNK1D-213ENST00000580446 DNAJC5GQ8N7S2 189 aa21.09■□□□□ 0.97
CSNK1D-213ENST00000580446 TOPAZ1Q8N9V7 1692 aa21.09■□□□□ 0.97
CSNK1D-213ENST00000580446 BCL9O00512 1426 aa21.08■□□□□ 0.97
CSNK1D-213ENST00000580446 ADGRB1O14514 1584 aa21.08■□□□□ 0.97
CSNK1D-213ENST00000580446 WWC3Q9ULE0 1092 aa21.08■□□□□ 0.97
CSNK1D-213ENST00000580446 KCNQ4P56696 695 aa21.07■□□□□ 0.96
CSNK1D-213ENST00000580446 ADCY9O60503 1353 aa21.07■□□□□ 0.96
CSNK1D-213ENST00000580446 PNPLA7Q6ZV29 1317 aa21.06■□□□□ 0.96
CSNK1D-213ENST00000580446 TNS4Q8IZW8 715 aa21.06■□□□□ 0.96
CSNK1D-213ENST00000580446 AXIN2Q9Y2T1 843 aa21.06■□□□□ 0.96
CSNK1D-213ENST00000580446 KIF3CO14782 793 aa21.05■□□□□ 0.96
CSNK1D-213ENST00000580446 HTRA3P83110 453 aa21.05■□□□□ 0.96
CSNK1D-213ENST00000580446 APLP1P51693 650 aa21.04■□□□□ 0.96
CSNK1D-213ENST00000580446 POLR3AO14802 1390 aaPredicted RBP21.04■□□□□ 0.96
CSNK1D-213ENST00000580446 AKAP12Q02952 1782 aa21.04■□□□□ 0.96
CSNK1D-213ENST00000580446 PRELPP51888 382 aa21.03■□□□□ 0.96
CSNK1D-213ENST00000580446 NLRP13Q86W25 1043 aa21.03■□□□□ 0.96
CSNK1D-213ENST00000580446 AKT1S1Q96B36 256 aa21.03■□□□□ 0.96
CSNK1D-213ENST00000580446 CDK19Q9BWU1 502 aa21.03■□□□□ 0.96
CSNK1D-213ENST00000580446 WDR17Q8IZU2 1322 aa21.02■□□□□ 0.95
CSNK1D-213ENST00000580446 WNK3Q9BYP7 1800 aa21.01■□□□□ 0.95
CSNK1D-213ENST00000580446 EXOC5O00471 708 aa21.01■□□□□ 0.95
CSNK1D-213ENST00000580446 MSL1Q68DK7 614 aa21.01■□□□□ 0.95
CSNK1D-213ENST00000580446 ITSN1Q15811 1721 aa21.01■□□□□ 0.95
CSNK1D-213ENST00000580446 CSB-PGBD3P0DP91 1061 aa21■□□□□ 0.95
CSNK1D-213ENST00000580446 SLC16A10Q8TF71 515 aa20.99■□□□□ 0.95
CSNK1D-213ENST00000580446 NHSQ6T4R5 1651 aa20.99■□□□□ 0.95
CSNK1D-213ENST00000580446 BRD4O60885 1362 aaPredicted RBP20.98■□□□□ 0.95
CSNK1D-213ENST00000580446 USP6P35125 1406 aa20.98■□□□□ 0.95
CSNK1D-213ENST00000580446 SOX12O15370 315 aa20.98■□□□□ 0.95
CSNK1D-213ENST00000580446 CDCA7Q9BWT1 371 aaPredicted RBP20.98■□□□□ 0.95
CSNK1D-213ENST00000580446 TFCP2L1Q9NZI6 479 aa20.98■□□□□ 0.95
CSNK1D-213ENST00000580446 MSH5O43196 834 aa20.97■□□□□ 0.95
CSNK1D-213ENST00000580446 MPHOSPH9Q99550 1183 aa20.97■□□□□ 0.95
CSNK1D-213ENST00000580446 NLRP6P59044 892 aa20.96■□□□□ 0.95
CSNK1D-213ENST00000580446 TNS2Q63HR2 1409 aa20.95■□□□□ 0.95
CSNK1D-213ENST00000580446 KDM2AQ9Y2K7 1162 aa20.95■□□□□ 0.94
CSNK1D-213ENST00000580446 SLC34A2O95436 690 aa20.94■□□□□ 0.94
CSNK1D-213ENST00000580446 CARD10Q9BWT7 1032 aa20.94■□□□□ 0.94
CSNK1D-213ENST00000580446 CCDC61Q9Y6R9 512 aa20.94■□□□□ 0.94
CSNK1D-213ENST00000580446 PLEKHG3A1L390 1219 aa20.93■□□□□ 0.94
CSNK1D-213ENST00000580446 BTAF1O14981 1849 aa20.92■□□□□ 0.94
CSNK1D-213ENST00000580446 COL18A1P39060 1754 aa20.91■□□□□ 0.94
CSNK1D-213ENST00000580446 COL24A1Q17RW2 1714 aa20.91■□□□□ 0.94
CSNK1D-213ENST00000580446 ARHGEF28Q8N1W1 1705 aaKnown RBP20.9■□□□□ 0.94
CSNK1D-213ENST00000580446 CPSF1Q10570 1443 aaKnown RBP20.9■□□□□ 0.94
CSNK1D-213ENST00000580446 TUBGCP6Q96RT7 1819 aa20.9■□□□□ 0.94
CSNK1D-213ENST00000580446 SLIT3O75094 1523 aa20.89■□□□□ 0.94
CSNK1D-213ENST00000580446 PPIP5K1Q6PFW1 1433 aa20.88■□□□□ 0.93
CSNK1D-213ENST00000580446 KLRG1Q96E93 195 aa20.88■□□□□ 0.93
CSNK1D-213ENST00000580446 COL23A1Q86Y22 540 aaPredicted RBP20.87■□□□□ 0.93
CSNK1D-213ENST00000580446 NMRK2Q9NPI5 230 aa20.85■□□□□ 0.93
CSNK1D-213ENST00000580446 ABCC6O95255 1503 aa20.84■□□□□ 0.93
CSNK1D-213ENST00000580446 TOMM70O94826 608 aa20.84■□□□□ 0.93
CSNK1D-213ENST00000580446 ARHGEF25Q86VW2 580 aa20.84■□□□□ 0.93
CSNK1D-213ENST00000580446 CABP2Q9NPB3 220 aa20.84■□□□□ 0.93
CSNK1D-213ENST00000580446 SLC27A3Q5K4L6 730 aa20.83■□□□□ 0.93
CSNK1D-213ENST00000580446 JMYQ8N9B5 988 aa20.83■□□□□ 0.93
CSNK1D-213ENST00000580446 CCDC7Q96M83 1385 aa20.83■□□□□ 0.92
CSNK1D-213ENST00000580446 IGSF1Q8N6C5 1336 aa20.82■□□□□ 0.92
CSNK1D-213ENST00000580446 QSER1Q2KHR3 1735 aa20.82■□□□□ 0.92
CSNK1D-213ENST00000580446 WDR90Q96KV7 1748 aa20.82■□□□□ 0.92
CSNK1D-213ENST00000580446 SRPK2P78362 688 aaKnown RBP20.82■□□□□ 0.92
CSNK1D-213ENST00000580446 SYTL4Q96C24 671 aaPredicted RBP20.82■□□□□ 0.92
CSNK1D-213ENST00000580446 RGPD5Q99666 1765 aa20.82■□□□□ 0.92
CSNK1D-213ENST00000580446 DCAF11Q8TEB1 546 aa20.81■□□□□ 0.92
CSNK1D-213ENST00000580446 NLRP2Q9NX02 1062 aa20.81■□□□□ 0.92
CSNK1D-213ENST00000580446 CD2APQ9Y5K6 639 aa20.81■□□□□ 0.92
CSNK1D-213ENST00000580446 TRPM1Q7Z4N2 1603 aa20.81■□□□□ 0.92
CSNK1D-213ENST00000580446 PIK3C2AO00443 1686 aa20.78■□□□□ 0.92
CSNK1D-213ENST00000580446 DDX54Q8TDD1 881 aaKnown RBP20.78■□□□□ 0.92
CSNK1D-213ENST00000580446 CABP1Q9NZU7 370 aa20.78■□□□□ 0.92
CSNK1D-213ENST00000580446 IL2RBP14784 551 aa20.76■□□□□ 0.91
CSNK1D-213ENST00000580446 CCNL1Q9UK58 526 aaPredicted RBP20.76■□□□□ 0.91
CSNK1D-213ENST00000580446 SMIM5Q71RC9 77 aa20.75■□□□□ 0.91
CSNK1D-213ENST00000580446 PRIM1P49642 420 aaKnown RBP20.74■□□□□ 0.91
CSNK1D-213ENST00000580446 PCNTO95613 3336 aa20.73■□□□□ 0.91
CSNK1D-213ENST00000580446 HSPA1AP0DMV8 641 aaKnown RBP20.73■□□□□ 0.91
CSNK1D-213ENST00000580446 HSPA1BP0DMV9 641 aaKnown RBP20.73■□□□□ 0.91
CSNK1D-213ENST00000580446 KAT6BQ8WYB5 2073 aa20.71■□□□□ 0.91
CSNK1D-213ENST00000580446 NSD2O96028 1365 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms