RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 MYO3AQ8NEV4 1616 aa12.24□□□□□ -0.45
SENP3-203ENST00000580231 PREX1Q8TCU6 1659 aa12.24□□□□□ -0.45
SENP3-203ENST00000580231 PNISRQ8TF01 805 aaKnown RBP12.24□□□□□ -0.45
SENP3-203ENST00000580231 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
SENP3-203ENST00000580231 LMTK3Q96Q04 1460 aa12.24□□□□□ -0.45
SENP3-203ENST00000580231 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
SENP3-203ENST00000580231 CENPJQ9HC77 1338 aaPredicted RBP12.22□□□□□ -0.45
SENP3-203ENST00000580231 NEXMIFQ5QGS0 1516 aa12.21□□□□□ -0.45
SENP3-203ENST00000580231 ERVK-7P63135 1459 aa12.21□□□□□ -0.45
SENP3-203ENST00000580231 INSRP06213 1382 aa12.21□□□□□ -0.45
SENP3-203ENST00000580231 KNSTRNQ9Y448 316 aa12.21□□□□□ -0.45
SENP3-203ENST00000580231 TMEM131LA2VDJ0 1609 aa12.2□□□□□ -0.46
SENP3-203ENST00000580231 NEFLP07196 543 aa12.2□□□□□ -0.46
SENP3-203ENST00000580231 MLECQ14165 292 aa12.2□□□□□ -0.46
SENP3-203ENST00000580231 ADGRB1O14514 1584 aa12.2□□□□□ -0.46
SENP3-203ENST00000580231 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
SENP3-203ENST00000580231 LRPPRCP42704 1394 aaKnown RBP12.19□□□□□ -0.46
SENP3-203ENST00000580231 PHF14O94880 888 aa12.19□□□□□ -0.46
SENP3-203ENST00000580231 TYW1BQ6NUM6 668 aa12.19□□□□□ -0.46
SENP3-203ENST00000580231 ESF1Q9H501 851 aaKnown RBP12.19□□□□□ -0.46
SENP3-203ENST00000580231 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
SENP3-203ENST00000580231 PPP1R3GB7ZBB8 358 aa12.18□□□□□ -0.46
SENP3-203ENST00000580231 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
SENP3-203ENST00000580231 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
SENP3-203ENST00000580231 SPATA31D1Q6ZQQ2 1576 aa12.18□□□□□ -0.46
SENP3-203ENST00000580231 DPYSL4O14531 572 aa12.17□□□□□ -0.46
SENP3-203ENST00000580231 PTPN5P54829 565 aa12.17□□□□□ -0.46
SENP3-203ENST00000580231 FBXO31Q5XUX0 539 aaPredicted RBP12.17□□□□□ -0.46
SENP3-203ENST00000580231 CLTCQ00610 1675 aaKnown RBP12.16□□□□□ -0.46
SENP3-203ENST00000580231 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
SENP3-203ENST00000580231 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
SENP3-203ENST00000580231 ERICH6BQ5W0A0 696 aa12.16□□□□□ -0.46
SENP3-203ENST00000580231 THSD4Q6ZMP0 1018 aa12.16□□□□□ -0.46
SENP3-203ENST00000580231 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
SENP3-203ENST00000580231 TRAK1Q9UPV9 953 aa12.16□□□□□ -0.46
SENP3-203ENST00000580231 ASXL1Q8IXJ9 1541 aa12.16□□□□□ -0.46
SENP3-203ENST00000580231 GOLGA8CPA6NN73 597 aa12.15□□□□□ -0.46
SENP3-203ENST00000580231 COL9A1P20849 921 aa12.15□□□□□ -0.46
SENP3-203ENST00000580231 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.15□□□□□ -0.46
SENP3-203ENST00000580231 HSPA2P54652 639 aa12.14□□□□□ -0.47
SENP3-203ENST00000580231 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
SENP3-203ENST00000580231 CC2D1BQ5T0F9 858 aaKnown RBP12.14□□□□□ -0.47
SENP3-203ENST00000580231 TMEM132EQ6IEE7 984 aa12.14□□□□□ -0.47
SENP3-203ENST00000580231 WNT2BQ93097 391 aa12.14□□□□□ -0.47
SENP3-203ENST00000580231 ZMYM3Q14202 1370 aa12.14□□□□□ -0.47
SENP3-203ENST00000580231 EVC2Q86UK5 1308 aa12.13□□□□□ -0.47
SENP3-203ENST00000580231 PROX2Q3B8N5 592 aa12.13□□□□□ -0.47
SENP3-203ENST00000580231 MYOM1P52179 1685 aa12.13□□□□□ -0.47
SENP3-203ENST00000580231 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
SENP3-203ENST00000580231 EPAS1Q99814 870 aa12.12□□□□□ -0.47
SENP3-203ENST00000580231 RABGEF1Q9UJ41 708 aa12.12□□□□□ -0.47
SENP3-203ENST00000580231 A2ML1A8K2U0 1454 aa12.12□□□□□ -0.47
SENP3-203ENST00000580231 C3P01024 1663 aa12.12□□□□□ -0.47
SENP3-203ENST00000580231 QRICH2Q9H0J4 1663 aa12.12□□□□□ -0.47
SENP3-203ENST00000580231 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
SENP3-203ENST00000580231 MYO5BQ9ULV0 1848 aa12.11□□□□□ -0.47
SENP3-203ENST00000580231 PPP2R1AP30153 589 aa12.11□□□□□ -0.47
SENP3-203ENST00000580231 PDE3BQ13370 1112 aa12.11□□□□□ -0.47
SENP3-203ENST00000580231 NINLQ9Y2I6 1382 aa12.1□□□□□ -0.47
SENP3-203ENST00000580231 CEBPAP49715 358 aaPredicted RBP12.1□□□□□ -0.47
SENP3-203ENST00000580231 RIMS2Q9UQ26 1411 aa12.1□□□□□ -0.47
SENP3-203ENST00000580231 ARHGEF28Q8N1W1 1705 aaKnown RBP12.09□□□□□ -0.47
SENP3-203ENST00000580231 C6orf132Q5T0Z8 1188 aa12.09□□□□□ -0.47
SENP3-203ENST00000580231 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
SENP3-203ENST00000580231 YTHDC2Q9H6S0 1430 aaKnown RBP12.09□□□□□ -0.47
SENP3-203ENST00000580231 ALKQ9UM73 1620 aa12.08□□□□□ -0.48
SENP3-203ENST00000580231 SIRT1Q96EB6 747 aa12.08□□□□□ -0.48
SENP3-203ENST00000580231 CARD14Q9BXL6 1004 aa12.08□□□□□ -0.48
SENP3-203ENST00000580231 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.08□□□□□ -0.48
SENP3-203ENST00000580231 NUDCQ9Y266 331 aa12.08□□□□□ -0.48
SENP3-203ENST00000580231 TNRQ92752 1358 aa12.07□□□□□ -0.48
SENP3-203ENST00000580231 STRCQ7RTU9 1775 aa12.07□□□□□ -0.48
SENP3-203ENST00000580231 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
SENP3-203ENST00000580231 BLMP54132 1417 aaPredicted RBP12.06□□□□□ -0.48
SENP3-203ENST00000580231 POGKQ9P215 609 aa12.06□□□□□ -0.48
SENP3-203ENST00000580231 NSD2O96028 1365 aa12.05□□□□□ -0.48
SENP3-203ENST00000580231 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
SENP3-203ENST00000580231 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
SENP3-203ENST00000580231 DDX12PQ92771 950 aa12.05□□□□□ -0.48
SENP3-203ENST00000580231 SLC12A5Q9H2X9 1139 aa12.05□□□□□ -0.48
SENP3-203ENST00000580231 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
SENP3-203ENST00000580231 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
SENP3-203ENST00000580231 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
SENP3-203ENST00000580231 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
SENP3-203ENST00000580231 WDR43Q15061 677 aaKnown RBP eCLIP12.04□□□□□ -0.48
SENP3-203ENST00000580231 PDIA6Q15084 440 aa12.04□□□□□ -0.48
SENP3-203ENST00000580231 FBXO41Q8TF61 875 aa12.04□□□□□ -0.48
SENP3-203ENST00000580231 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
SENP3-203ENST00000580231 STK26Q9P289 416 aa12.04□□□□□ -0.48
SENP3-203ENST00000580231 SETD1BQ9UPS6 1966 aaKnown RBP12.04□□□□□ -0.48
SENP3-203ENST00000580231 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
SENP3-203ENST00000580231 ANKRD36BQ8N2N9 1353 aa12.04□□□□□ -0.48
SENP3-203ENST00000580231 NLRP1Q9C000 1473 aa12.03□□□□□ -0.48
SENP3-203ENST00000580231 TULP4Q9NRJ4 1543 aa12.03□□□□□ -0.48
SENP3-203ENST00000580231 IFFO2Q5TF58 517 aa12.03□□□□□ -0.48
SENP3-203ENST00000580231 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
SENP3-203ENST00000580231 RBM33Q96EV2 1170 aaKnown RBP12.03□□□□□ -0.48
SENP3-203ENST00000580231 PRAM1Q96QH2 718 aa12.03□□□□□ -0.48
SENP3-203ENST00000580231 MORC1Q86VD1 984 aa12.02□□□□□ -0.49
SENP3-203ENST00000580231 ANKK1Q8NFD2 765 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms