RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 NEFLP07196 543 aa9.82□□□□□ -0.84
COPS3-216ENST00000579716 TUSC1Q2TAM9 212 aa9.81□□□□□ -0.84
COPS3-216ENST00000579716 TAF7LQ5H9L4 462 aa9.81□□□□□ -0.84
COPS3-216ENST00000579716 BPHLQ86WA6 291 aaPredicted RBP9.81□□□□□ -0.84
COPS3-216ENST00000579716 LINC00528Q8N1L1 170 aa9.81□□□□□ -0.84
COPS3-216ENST00000579716 PUS7Q96PZ0 661 aaKnown RBP9.81□□□□□ -0.84
COPS3-216ENST00000579716 MAN1A2O60476 641 aa9.8□□□□□ -0.84
COPS3-216ENST00000579716 FBXO31Q5XUX0 539 aaPredicted RBP9.8□□□□□ -0.84
COPS3-216ENST00000579716 AK7Q96M32 723 aa9.8□□□□□ -0.84
COPS3-216ENST00000579716 PDE4CQ08493 712 aa9.79□□□□□ -0.84
COPS3-216ENST00000579716 TRMT44Q8IYL2 757 aaKnown RBP9.79□□□□□ -0.84
COPS3-216ENST00000579716 BMP2P12643 396 aa9.78□□□□□ -0.84
COPS3-216ENST00000579716 AGERQ15109 404 aa9.78□□□□□ -0.84
COPS3-216ENST00000579716 MAP4K5Q9Y4K4 846 aa9.78□□□□□ -0.84
COPS3-216ENST00000579716 PDE4DQ08499 809 aa9.77□□□□□ -0.85
COPS3-216ENST00000579716 FSHRP23945 695 aa9.76□□□□□ -0.85
COPS3-216ENST00000579716 IGSF3O75054 1194 aa9.75□□□□□ -0.85
COPS3-216ENST00000579716 TSC1Q92574 1164 aa9.75□□□□□ -0.85
COPS3-216ENST00000579716 NUTM2BA6NNL0 878 aaPredicted RBP9.74□□□□□ -0.85
COPS3-216ENST00000579716 NUTM2EB1AL46 878 aaPredicted RBP9.74□□□□□ -0.85
COPS3-216ENST00000579716 KCNMA1Q12791 1236 aa9.74□□□□□ -0.85
COPS3-216ENST00000579716 CBLBQ13191 982 aa9.74□□□□□ -0.85
COPS3-216ENST00000579716 NUTM2DQ5VT03 806 aaPredicted RBP9.74□□□□□ -0.85
COPS3-216ENST00000579716 NUTM2AQ8IVF1 878 aaPredicted RBP9.74□□□□□ -0.85
COPS3-216ENST00000579716 CTDSPL2Q05D32 466 aa9.73□□□□□ -0.85
COPS3-216ENST00000579716 ERFEQ4G0M1 354 aa9.73□□□□□ -0.85
COPS3-216ENST00000579716 Q6ZVU0 165 aa9.73□□□□□ -0.85
COPS3-216ENST00000579716 VASH1Q7L8A9 365 aaPredicted RBP9.73□□□□□ -0.85
COPS3-216ENST00000579716 OCSTAMPQ9BR26 566 aa9.73□□□□□ -0.85
COPS3-216ENST00000579716 PTSQ03393 145 aa9.72□□□□□ -0.85
COPS3-216ENST00000579716 TSEN34Q9BSV6 310 aaKnown RBP9.72□□□□□ -0.85
COPS3-216ENST00000579716 MAGEB6P1A0A0J9YX57 407 aa9.71□□□□□ -0.86
COPS3-216ENST00000579716 RNFT1Q5M7Z0 435 aa9.71□□□□□ -0.86
COPS3-216ENST00000579716 CCDC116Q8IYX3 515 aa9.71□□□□□ -0.86
COPS3-216ENST00000579716 ARMC2Q8NEN0 867 aa9.71□□□□□ -0.86
COPS3-216ENST00000579716 FIGNL2A6NMB9 653 aa9.7□□□□□ -0.86
COPS3-216ENST00000579716 PPP1R26Q5T8A7 1209 aaPredicted RBP9.7□□□□□ -0.86
COPS3-216ENST00000579716 EMILIN1Q9Y6C2 1016 aa9.7□□□□□ -0.86
COPS3-216ENST00000579716 TTLL8A6PVC2 850 aa9.69□□□□□ -0.86
COPS3-216ENST00000579716 SPINT1O43278 529 aa9.69□□□□□ -0.86
COPS3-216ENST00000579716 SUZ12Q15022 739 aaKnown RBP9.69□□□□□ -0.86
COPS3-216ENST00000579716 NANOS1Q8WY41 292 aaKnown RBP9.69□□□□□ -0.86
COPS3-216ENST00000579716 CNTNAP3BQ96NU0 1288 aa9.69□□□□□ -0.86
COPS3-216ENST00000579716 CNTNAP3Q9BZ76 1288 aa9.69□□□□□ -0.86
COPS3-216ENST00000579716 SLC24A3Q9HC58 644 aa9.69□□□□□ -0.86
COPS3-216ENST00000579716 POLR3EQ9NVU0 708 aa9.69□□□□□ -0.86
COPS3-216ENST00000579716 UPP2O95045 317 aa9.68□□□□□ -0.86
COPS3-216ENST00000579716 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
COPS3-216ENST00000579716 KCTD17Q8N5Z5 321 aa9.68□□□□□ -0.86
COPS3-216ENST00000579716 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
COPS3-216ENST00000579716 CARD14Q9BXL6 1004 aa9.68□□□□□ -0.86
COPS3-216ENST00000579716 SLC35F4A4IF30 521 aa9.67□□□□□ -0.86
COPS3-216ENST00000579716 CLK2P49760 499 aaKnown RBP9.67□□□□□ -0.86
COPS3-216ENST00000579716 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.67□□□□□ -0.86
COPS3-216ENST00000579716 FAM9AQ8IZU1 332 aaPredicted RBP9.67□□□□□ -0.86
COPS3-216ENST00000579716 CCDC155Q8N6L0 562 aa9.66□□□□□ -0.86
COPS3-216ENST00000579716 WHAMMQ8TF30 809 aa9.66□□□□□ -0.86
COPS3-216ENST00000579716 COL25A1Q9BXS0 654 aaPredicted RBP9.66□□□□□ -0.86
COPS3-216ENST00000579716 ADAMTS8Q9UP79 889 aa9.66□□□□□ -0.86
COPS3-216ENST00000579716 CTSOP43234 321 aaPredicted RBP9.65□□□□□ -0.86
COPS3-216ENST00000579716 ZNF385CQ66K41 422 aaPredicted RBP9.65□□□□□ -0.86
COPS3-216ENST00000579716 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
COPS3-216ENST00000579716 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
COPS3-216ENST00000579716 KDF1Q8NAX2 398 aaPredicted RBP9.64□□□□□ -0.87
COPS3-216ENST00000579716 HELBQ8NG08 1087 aaPredicted RBP9.64□□□□□ -0.87
COPS3-216ENST00000579716 GPKOWQ92917 476 aaPredicted RBP eCLIP9.64□□□□□ -0.87
COPS3-216ENST00000579716 KCTD15Q96SI1 283 aaPredicted RBP9.64□□□□□ -0.87
COPS3-216ENST00000579716 POLR3GLQ9BT43 218 aa9.64□□□□□ -0.87
COPS3-216ENST00000579716 SENP3-EIF4A1A0A087X0R7 540 aa9.63□□□□□ -0.87
COPS3-216ENST00000579716 RASSF7Q02833 373 aa9.63□□□□□ -0.87
COPS3-216ENST00000579716 DHX37Q8IY37 1157 aaKnown RBP9.63□□□□□ -0.87
COPS3-216ENST00000579716 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
COPS3-216ENST00000579716 RSPH6AQ9H0K4 717 aa9.62□□□□□ -0.87
COPS3-216ENST00000579716 FKBPLQ9UIM3 349 aa9.62□□□□□ -0.87
COPS3-216ENST00000579716 ARHGEF15O94989 841 aa9.61□□□□□ -0.87
COPS3-216ENST00000579716 SLURP2P0DP57 97 aa9.61□□□□□ -0.87
COPS3-216ENST00000579716 ADD1P35611 737 aaKnown RBP9.61□□□□□ -0.87
COPS3-216ENST00000579716 NR6A1Q15406 480 aa9.61□□□□□ -0.87
COPS3-216ENST00000579716 INTS6LQ5JSJ4 861 aaKnown RBP9.61□□□□□ -0.87
COPS3-216ENST00000579716 VWA5B2Q8N398 1253 aa9.61□□□□□ -0.87
COPS3-216ENST00000579716 EPS8L1Q8TE68 723 aa9.61□□□□□ -0.87
COPS3-216ENST00000579716 BCCIPQ9P287 314 aaKnown RBP eCLIP9.61□□□□□ -0.87
COPS3-216ENST00000579716 INSM2Q96T92 566 aaPredicted RBP9.6□□□□□ -0.87
COPS3-216ENST00000579716 ARHGAP9Q9BRR9 750 aa9.6□□□□□ -0.87
COPS3-216ENST00000579716 ZMYND15Q9H091 742 aa9.6□□□□□ -0.87
COPS3-216ENST00000579716 ITGA6P23229 1130 aa9.59□□□□□ -0.87
COPS3-216ENST00000579716 ARID3AQ99856 593 aa9.59□□□□□ -0.87
COPS3-216ENST00000579716 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.59□□□□□ -0.87
COPS3-216ENST00000579716 TMPRSS4Q9NRS4 437 aa9.59□□□□□ -0.87
COPS3-216ENST00000579716 LILRA1O75019 489 aa9.58□□□□□ -0.88
COPS3-216ENST00000579716 PGPEP1Q9NXJ5 209 aa9.58□□□□□ -0.88
COPS3-216ENST00000579716 GDF11O95390 407 aa9.57□□□□□ -0.88
COPS3-216ENST00000579716 RELBQ01201 579 aa9.57□□□□□ -0.88
COPS3-216ENST00000579716 ZNF326Q5BKZ1 582 aaKnown RBP9.57□□□□□ -0.88
COPS3-216ENST00000579716 TMEM151AQ8N4L1 468 aa9.57□□□□□ -0.88
COPS3-216ENST00000579716 RNF217Q8TC41 542 aa9.57□□□□□ -0.88
COPS3-216ENST00000579716 CUEDC1Q9NWM3 386 aaPredicted RBP9.57□□□□□ -0.88
COPS3-216ENST00000579716 PPP2R2DQ66LE6 453 aa9.56□□□□□ -0.88
COPS3-216ENST00000579716 ZNF395Q9H8N7 513 aaPredicted RBP9.56□□□□□ -0.88
COPS3-216ENST00000579716 SKIV2LQ15477 1246 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms