RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 BCL9O00512 1426 aa12.3□□□□□ -0.44
CASC3-206ENST00000579238 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
CASC3-206ENST00000579238 PIK3C2AO00443 1686 aa12.3□□□□□ -0.44
CASC3-206ENST00000579238 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
CASC3-206ENST00000579238 L3MBTL2Q969R5 705 aa12.3□□□□□ -0.44
CASC3-206ENST00000579238 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
CASC3-206ENST00000579238 RGPD3A6NKT7 1758 aaPredicted RBP12.3□□□□□ -0.44
CASC3-206ENST00000579238 RGPD4Q7Z3J3 1758 aa12.3□□□□□ -0.44
CASC3-206ENST00000579238 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
CASC3-206ENST00000579238 YY1P25490 414 aa12.29□□□□□ -0.44
CASC3-206ENST00000579238 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
CASC3-206ENST00000579238 CARD10Q9BWT7 1032 aa12.29□□□□□ -0.44
CASC3-206ENST00000579238 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
CASC3-206ENST00000579238 SBF2Q86WG5 1849 aa12.28□□□□□ -0.44
CASC3-206ENST00000579238 DCAF8L1A6NGE4 600 aa12.28□□□□□ -0.44
CASC3-206ENST00000579238 PTF1AQ7RTS3 328 aa12.28□□□□□ -0.44
CASC3-206ENST00000579238 ANO8Q9HCE9 1232 aaPredicted RBP12.28□□□□□ -0.44
CASC3-206ENST00000579238 TRPM1Q7Z4N2 1603 aa12.28□□□□□ -0.44
CASC3-206ENST00000579238 CSB-PGBD3P0DP91 1061 aa12.27□□□□□ -0.45
CASC3-206ENST00000579238 PROM2Q8N271 834 aa12.27□□□□□ -0.45
CASC3-206ENST00000579238 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
CASC3-206ENST00000579238 WNK3Q9BYP7 1800 aa12.26□□□□□ -0.45
CASC3-206ENST00000579238 EXOC5O00471 708 aa12.26□□□□□ -0.45
CASC3-206ENST00000579238 SOX12O15370 315 aa12.26□□□□□ -0.45
CASC3-206ENST00000579238 CCDC7Q96M83 1385 aa12.25□□□□□ -0.45
CASC3-206ENST00000579238 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
CASC3-206ENST00000579238 NFAT5O94916 1531 aa12.24□□□□□ -0.45
CASC3-206ENST00000579238 ABCC6O95255 1503 aa12.24□□□□□ -0.45
CASC3-206ENST00000579238 TXNRD1Q16881 649 aa12.24□□□□□ -0.45
CASC3-206ENST00000579238 KTN1Q86UP2 1357 aaKnown RBP12.24□□□□□ -0.45
CASC3-206ENST00000579238 CASZ1Q86V15 1759 aa12.24□□□□□ -0.45
CASC3-206ENST00000579238 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
CASC3-206ENST00000579238 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
CASC3-206ENST00000579238 PDGFDQ9GZP0 370 aaPredicted RBP12.23□□□□□ -0.45
CASC3-206ENST00000579238 STK32BQ9NY57 414 aa12.23□□□□□ -0.45
CASC3-206ENST00000579238 RGPD5Q99666 1765 aa12.23□□□□□ -0.45
CASC3-206ENST00000579238 USP31Q70CQ4 1352 aa12.22□□□□□ -0.45
CASC3-206ENST00000579238 ZBTB7AO95365 584 aa12.22□□□□□ -0.45
CASC3-206ENST00000579238 PTGER2P43116 358 aa12.22□□□□□ -0.45
CASC3-206ENST00000579238 SBNO2Q9Y2G9 1366 aa12.21□□□□□ -0.45
CASC3-206ENST00000579238 NEUROD1Q13562 356 aa12.21□□□□□ -0.45
CASC3-206ENST00000579238 SLC15A2Q16348 729 aa12.21□□□□□ -0.45
CASC3-206ENST00000579238 ERBB3P21860 1342 aa12.2□□□□□ -0.46
CASC3-206ENST00000579238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.2□□□□□ -0.46
CASC3-206ENST00000579238 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
CASC3-206ENST00000579238 MTFR1LQ9H019 292 aa12.19□□□□□ -0.46
CASC3-206ENST00000579238 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
CASC3-206ENST00000579238 MON2Q7Z3U7 1717 aa12.19□□□□□ -0.46
CASC3-206ENST00000579238 IL2RBP14784 551 aa12.18□□□□□ -0.46
CASC3-206ENST00000579238 NME9Q86XW9 330 aa12.18□□□□□ -0.46
CASC3-206ENST00000579238 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
CASC3-206ENST00000579238 MYOM1P52179 1685 aa12.18□□□□□ -0.46
CASC3-206ENST00000579238 USP54Q70EL1 1684 aa12.18□□□□□ -0.46
CASC3-206ENST00000579238 NHSQ6T4R5 1651 aa12.17□□□□□ -0.46
CASC3-206ENST00000579238 CD163L1Q9NR16 1453 aa12.17□□□□□ -0.46
CASC3-206ENST00000579238 HDGFL2Q7Z4V5 671 aaPredicted RBP12.17□□□□□ -0.46
CASC3-206ENST00000579238 ANKRD24Q8TF21 1146 aa12.17□□□□□ -0.46
CASC3-206ENST00000579238 SYT17Q9BSW7 474 aa12.17□□□□□ -0.46
CASC3-206ENST00000579238 TMC1Q8TDI8 760 aa12.16□□□□□ -0.46
CASC3-206ENST00000579238 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
CASC3-206ENST00000579238 CARD11Q9BXL7 1154 aa12.16□□□□□ -0.46
CASC3-206ENST00000579238 FHDC1Q9C0D6 1143 aaPredicted RBP12.16□□□□□ -0.46
CASC3-206ENST00000579238 EDC4Q6P2E9 1401 aaKnown RBP12.16□□□□□ -0.46
CASC3-206ENST00000579238 SLC12A5Q9H2X9 1139 aa12.15□□□□□ -0.46
CASC3-206ENST00000579238 PUS7Q96PZ0 661 aaKnown RBP12.14□□□□□ -0.47
CASC3-206ENST00000579238 TERF2IPQ9NYB0 399 aa12.14□□□□□ -0.47
CASC3-206ENST00000579238 LTN1O94822 1766 aa12.13□□□□□ -0.47
CASC3-206ENST00000579238 PAPPAQ13219 1627 aa12.13□□□□□ -0.47
CASC3-206ENST00000579238 IP6K1Q92551 441 aa12.13□□□□□ -0.47
CASC3-206ENST00000579238 ARXQ96QS3 562 aa12.13□□□□□ -0.47
CASC3-206ENST00000579238 BTAF1O14981 1849 aa12.12□□□□□ -0.47
CASC3-206ENST00000579238 ZNF827Q17R98 1081 aa12.12□□□□□ -0.47
CASC3-206ENST00000579238 ZNF784Q8NCA9 323 aaPredicted RBP12.12□□□□□ -0.47
CASC3-206ENST00000579238 LRRC4BQ9NT99 713 aa12.12□□□□□ -0.47
CASC3-206ENST00000579238 A0A1W2PP64 1363 aa12.12□□□□□ -0.47
CASC3-206ENST00000579238 MAP3K5Q99683 1374 aa12.12□□□□□ -0.47
CASC3-206ENST00000579238 UTRNP46939 3433 aa12.12□□□□□ -0.47
CASC3-206ENST00000579238 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
CASC3-206ENST00000579238 DDX54Q8TDD1 881 aaKnown RBP12.1□□□□□ -0.47
CASC3-206ENST00000579238 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
CASC3-206ENST00000579238 AKT1S1Q96B36 256 aa12.1□□□□□ -0.47
CASC3-206ENST00000579238 KAT6BQ8WYB5 2073 aa12.1□□□□□ -0.47
CASC3-206ENST00000579238 LTV1Q96GA3 475 aaPredicted RBP12.09□□□□□ -0.47
CASC3-206ENST00000579238 FAM208AQ9UK61 1670 aaKnown RBP12.08□□□□□ -0.48
CASC3-206ENST00000579238 COG3Q96JB2 828 aa12.08□□□□□ -0.48
CASC3-206ENST00000579238 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
CASC3-206ENST00000579238 ANKRD36BQ8N2N9 1353 aa12.07□□□□□ -0.48
CASC3-206ENST00000579238 TONSLQ96HA7 1378 aa12.07□□□□□ -0.48
CASC3-206ENST00000579238 SLC24A1O60721 1099 aa12.07□□□□□ -0.48
CASC3-206ENST00000579238 POLD1P28340 1107 aa12.07□□□□□ -0.48
CASC3-206ENST00000579238 HOXC9P31274 260 aa12.07□□□□□ -0.48
CASC3-206ENST00000579238 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
CASC3-206ENST00000579238 TESK2Q96S53 571 aa12.07□□□□□ -0.48
CASC3-206ENST00000579238 PNPLA7Q6ZV29 1317 aa12.07□□□□□ -0.48
CASC3-206ENST00000579238 CHD4Q14839 1912 aa12.06□□□□□ -0.48
CASC3-206ENST00000579238 AMPHP49418 695 aa12.06□□□□□ -0.48
CASC3-206ENST00000579238 GPR162Q16538 588 aa12.06□□□□□ -0.48
CASC3-206ENST00000579238 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
CASC3-206ENST00000579238 SYTL4Q96C24 671 aaPredicted RBP12.06□□□□□ -0.48
CASC3-206ENST00000579238 TFCP2L1Q9NZI6 479 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms