RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 AXIN2Q9Y2T1 843 aa27.53■■■□□ 2
CDKN2A-213ENST00000579122 ARHGEF25Q86VW2 580 aa27.51■■□□□ 1.99
CDKN2A-213ENST00000579122 TTC21AQ8NDW8 1320 aa27.5■■□□□ 1.99
CDKN2A-213ENST00000579122 CDCA7Q9BWT1 371 aaPredicted RBP27.5■■□□□ 1.99
CDKN2A-213ENST00000579122 AKAP12Q02952 1782 aa27.5■■□□□ 1.99
CDKN2A-213ENST00000579122 PLSCR1O15162 318 aa27.49■■□□□ 1.99
CDKN2A-213ENST00000579122 RGPD3A6NKT7 1758 aaPredicted RBP27.49■■□□□ 1.99
CDKN2A-213ENST00000579122 RGPD4Q7Z3J3 1758 aa27.49■■□□□ 1.99
CDKN2A-213ENST00000579122 WNK3Q9BYP7 1800 aa27.48■■□□□ 1.99
CDKN2A-213ENST00000579122 SBF2Q86WG5 1849 aa27.47■■□□□ 1.99
CDKN2A-213ENST00000579122 NEUROD1Q13562 356 aa27.47■■□□□ 1.99
CDKN2A-213ENST00000579122 BCL11BQ9C0K0 894 aaPredicted RBP27.47■■□□□ 1.99
CDKN2A-213ENST00000579122 BCL9O00512 1426 aa27.46■■□□□ 1.99
CDKN2A-213ENST00000579122 CARD10Q9BWT7 1032 aa27.45■■□□□ 1.98
CDKN2A-213ENST00000579122 KTN1Q86UP2 1357 aaKnown RBP27.45■■□□□ 1.98
CDKN2A-213ENST00000579122 MARCH10Q8NA82 808 aaPredicted RBP27.44■■□□□ 1.98
CDKN2A-213ENST00000579122 SPON1Q9HCB6 807 aa27.44■■□□□ 1.98
CDKN2A-213ENST00000579122 NFAT5O94916 1531 aa27.43■■□□□ 1.98
CDKN2A-213ENST00000579122 SOX12O15370 315 aa27.43■■□□□ 1.98
CDKN2A-213ENST00000579122 KCNQ2O43526 872 aa27.42■■□□□ 1.98
CDKN2A-213ENST00000579122 CSB-PGBD3P0DP91 1061 aa27.42■■□□□ 1.98
CDKN2A-213ENST00000579122 ABCC6O95255 1503 aa27.41■■□□□ 1.98
CDKN2A-213ENST00000579122 SBNO2Q9Y2G9 1366 aa27.41■■□□□ 1.98
CDKN2A-213ENST00000579122 RGPD5Q99666 1765 aa27.4■■□□□ 1.98
CDKN2A-213ENST00000579122 PTF1AQ7RTS3 328 aa27.4■■□□□ 1.98
CDKN2A-213ENST00000579122 CCDC7Q96M83 1385 aa27.39■■□□□ 1.98
CDKN2A-213ENST00000579122 MON2Q7Z3U7 1717 aa27.38■■□□□ 1.97
CDKN2A-213ENST00000579122 PPP1R1BQ9UD71 204 aaPredicted RBP27.38■■□□□ 1.97
CDKN2A-213ENST00000579122 USP31Q70CQ4 1352 aa27.37■■□□□ 1.97
CDKN2A-213ENST00000579122 EXOC5O00471 708 aa27.37■■□□□ 1.97
CDKN2A-213ENST00000579122 ANO8Q9HCE9 1232 aaPredicted RBP27.36■■□□□ 1.97
CDKN2A-213ENST00000579122 PROM2Q8N271 834 aa27.35■■□□□ 1.97
CDKN2A-213ENST00000579122 USP54Q70EL1 1684 aa27.34■■□□□ 1.97
CDKN2A-213ENST00000579122 NINLQ9Y2I6 1382 aa27.34■■□□□ 1.97
CDKN2A-213ENST00000579122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.33■■□□□ 1.97
CDKN2A-213ENST00000579122 TNS2Q63HR2 1409 aa27.33■■□□□ 1.96
CDKN2A-213ENST00000579122 CD163L1Q9NR16 1453 aa27.32■■□□□ 1.96
CDKN2A-213ENST00000579122 CARD11Q9BXL7 1154 aa27.32■■□□□ 1.96
CDKN2A-213ENST00000579122 CASZ1Q86V15 1759 aa27.32■■□□□ 1.96
CDKN2A-213ENST00000579122 TXNRD1Q16881 649 aa27.29■■□□□ 1.96
CDKN2A-213ENST00000579122 NME9Q86XW9 330 aa27.29■■□□□ 1.96
CDKN2A-213ENST00000579122 ERBB3P21860 1342 aa27.29■■□□□ 1.96
CDKN2A-213ENST00000579122 HDGFL2Q7Z4V5 671 aaPredicted RBP27.28■■□□□ 1.96
CDKN2A-213ENST00000579122 TMC1Q8TDI8 760 aa27.27■■□□□ 1.96
CDKN2A-213ENST00000579122 DCAF8L1A6NGE4 600 aa27.26■■□□□ 1.95
CDKN2A-213ENST00000579122 YY1P25490 414 aa27.26■■□□□ 1.95
CDKN2A-213ENST00000579122 NLRP2Q9NX02 1062 aa27.26■■□□□ 1.95
CDKN2A-213ENST00000579122 STK32BQ9NY57 414 aa27.26■■□□□ 1.95
CDKN2A-213ENST00000579122 EDC4Q6P2E9 1401 aaKnown RBP27.25■■□□□ 1.95
CDKN2A-213ENST00000579122 PDGFDQ9GZP0 370 aaPredicted RBP27.25■■□□□ 1.95
CDKN2A-213ENST00000579122 SLC12A5Q9H2X9 1139 aa27.24■■□□□ 1.95
CDKN2A-213ENST00000579122 NHSQ6T4R5 1651 aa27.24■■□□□ 1.95
CDKN2A-213ENST00000579122 LTN1O94822 1766 aa27.23■■□□□ 1.95
CDKN2A-213ENST00000579122 IL2RBP14784 551 aa27.23■■□□□ 1.95
CDKN2A-213ENST00000579122 SLC15A2Q16348 729 aa27.23■■□□□ 1.95
CDKN2A-213ENST00000579122 PUS7Q96PZ0 661 aaKnown RBP27.23■■□□□ 1.95
CDKN2A-213ENST00000579122 TERF2IPQ9NYB0 399 aa27.23■■□□□ 1.95
CDKN2A-213ENST00000579122 ZBTB7AO95365 584 aa27.22■■□□□ 1.95
CDKN2A-213ENST00000579122 ANKRD24Q8TF21 1146 aa27.22■■□□□ 1.95
CDKN2A-213ENST00000579122 A0A1W2PP64 1363 aa27.2■■□□□ 1.94
CDKN2A-213ENST00000579122 PTGER2P43116 358 aa27.19■■□□□ 1.94
CDKN2A-213ENST00000579122 ACSBG1Q96GR2 724 aa27.19■■□□□ 1.94
CDKN2A-213ENST00000579122 TONSLQ96HA7 1378 aa27.19■■□□□ 1.94
CDKN2A-213ENST00000579122 ATF5Q9Y2D1 282 aaPredicted RBP27.16■■□□□ 1.94
CDKN2A-213ENST00000579122 MYOM1P52179 1685 aa27.16■■□□□ 1.94
CDKN2A-213ENST00000579122 IP6K1Q92551 441 aa27.14■■□□□ 1.94
CDKN2A-213ENST00000579122 MTFR1LQ9H019 292 aa27.14■■□□□ 1.94
CDKN2A-213ENST00000579122 PAPPAQ13219 1627 aa27.12■■□□□ 1.93
CDKN2A-213ENST00000579122 BTAF1O14981 1849 aa27.11■■□□□ 1.93
CDKN2A-213ENST00000579122 TESK2Q96S53 571 aa27.1■■□□□ 1.93
CDKN2A-213ENST00000579122 FAM208AQ9UK61 1670 aaKnown RBP27.1■■□□□ 1.93
CDKN2A-213ENST00000579122 UTRNP46939 3433 aa27.09■■□□□ 1.93
CDKN2A-213ENST00000579122 SLC24A1O60721 1099 aa27.09■■□□□ 1.93
CDKN2A-213ENST00000579122 SGIP1Q9BQI5 828 aa27.09■■□□□ 1.93
CDKN2A-213ENST00000579122 COG3Q96JB2 828 aa27.07■■□□□ 1.92
CDKN2A-213ENST00000579122 SYT17Q9BSW7 474 aa27.07■■□□□ 1.92
CDKN2A-213ENST00000579122 FHDC1Q9C0D6 1143 aaPredicted RBP27.07■■□□□ 1.92
CDKN2A-213ENST00000579122 ST20-MTHFSA0A0A6YYL1 179 aa27.06■■□□□ 1.92
CDKN2A-213ENST00000579122 DDX54Q8TDD1 881 aaKnown RBP27.05■■□□□ 1.92
CDKN2A-213ENST00000579122 LTV1Q96GA3 475 aaPredicted RBP27.05■■□□□ 1.92
CDKN2A-213ENST00000579122 LRRC4BQ9NT99 713 aa27.05■■□□□ 1.92
CDKN2A-213ENST00000579122 ZNF827Q17R98 1081 aa27.04■■□□□ 1.92
CDKN2A-213ENST00000579122 MAP3K19Q56UN5 1328 aa27.04■■□□□ 1.92
CDKN2A-213ENST00000579122 HOXC9P31274 260 aa27.03■■□□□ 1.92
CDKN2A-213ENST00000579122 SLC27A3Q5K4L6 730 aa27.02■■□□□ 1.92
CDKN2A-213ENST00000579122 ARXQ96QS3 562 aa27.02■■□□□ 1.92
CDKN2A-213ENST00000579122 AMPHP49418 695 aa27.01■■□□□ 1.91
CDKN2A-213ENST00000579122 ANKRD36BQ8N2N9 1353 aa27■■□□□ 1.91
CDKN2A-213ENST00000579122 AKT1S1Q96B36 256 aa27■■□□□ 1.91
CDKN2A-213ENST00000579122 MAP3K5Q99683 1374 aa26.99■■□□□ 1.91
CDKN2A-213ENST00000579122 KAT6BQ8WYB5 2073 aa26.99■■□□□ 1.91
CDKN2A-213ENST00000579122 RTL1A6NKG5 1358 aa26.97■■□□□ 1.91
CDKN2A-213ENST00000579122 FBLN1P23142 703 aa26.97■■□□□ 1.91
CDKN2A-213ENST00000579122 SLC16A10Q8TF71 515 aa26.97■■□□□ 1.91
CDKN2A-213ENST00000579122 ZCRB1Q8TBF4 217 aaKnown RBP26.96■■□□□ 1.91
CDKN2A-213ENST00000579122 QSER1Q2KHR3 1735 aa26.96■■□□□ 1.91
CDKN2A-213ENST00000579122 PRIM1P49642 420 aaKnown RBP26.95■■□□□ 1.9
CDKN2A-213ENST00000579122 SYTL4Q96C24 671 aaPredicted RBP26.95■■□□□ 1.9
CDKN2A-213ENST00000579122 MEGF6O75095 1541 aa26.94■■□□□ 1.9
CDKN2A-213ENST00000579122 NSD2O96028 1365 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms