RNA–Protein interactions for RNA: ENST00000579066.1

CTC1-206, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-206ENST00000579066 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
CTC1-206ENST00000579066 WNK3Q9BYP7 1800 aa16■□□□□ 0.15
CTC1-206ENST00000579066 DISP2A7MBM2 1401 aa16■□□□□ 0.15
CTC1-206ENST00000579066 SBNO2Q9Y2G9 1366 aa16■□□□□ 0.15
CTC1-206ENST00000579066 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
CTC1-206ENST00000579066 CAMKK2Q96RR4 588 aa15.99■□□□□ 0.15
CTC1-206ENST00000579066 WDR17Q8IZU2 1322 aa15.97■□□□□ 0.15
CTC1-206ENST00000579066 PEAK1Q9H792 1746 aa15.97■□□□□ 0.15
CTC1-206ENST00000579066 CSB-PGBD3P0DP91 1061 aa15.97■□□□□ 0.15
CTC1-206ENST00000579066 KCNH5Q8NCM2 988 aa15.97■□□□□ 0.15
CTC1-206ENST00000579066 RREB1Q92766 1687 aa15.96■□□□□ 0.15
CTC1-206ENST00000579066 PTF1AQ7RTS3 328 aa15.96■□□□□ 0.15
CTC1-206ENST00000579066 LRP5O75197 1615 aa15.96■□□□□ 0.15
CTC1-206ENST00000579066 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.15
CTC1-206ENST00000579066 ST20-MTHFSA0A0A6YYL1 179 aa15.95■□□□□ 0.14
CTC1-206ENST00000579066 DDB1Q16531 1140 aa15.95■□□□□ 0.14
CTC1-206ENST00000579066 A0A1W2PP64 1363 aa15.95■□□□□ 0.14
CTC1-206ENST00000579066 LTN1O94822 1766 aa15.95■□□□□ 0.14
CTC1-206ENST00000579066 SBF2Q86WG5 1849 aa15.94■□□□□ 0.14
CTC1-206ENST00000579066 HDGFL2Q7Z4V5 671 aaPredicted RBP15.94■□□□□ 0.14
CTC1-206ENST00000579066 TESK2Q96S53 571 aa15.94■□□□□ 0.14
CTC1-206ENST00000579066 USP31Q70CQ4 1352 aa15.94■□□□□ 0.14
CTC1-206ENST00000579066 USP54Q70EL1 1684 aa15.94■□□□□ 0.14
CTC1-206ENST00000579066 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
CTC1-206ENST00000579066 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
CTC1-206ENST00000579066 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
CTC1-206ENST00000579066 MARCH10Q8NA82 808 aaPredicted RBP15.93■□□□□ 0.14
CTC1-206ENST00000579066 CARD10Q9BWT7 1032 aa15.92■□□□□ 0.14
CTC1-206ENST00000579066 EDC4Q6P2E9 1401 aaKnown RBP15.91■□□□□ 0.14
CTC1-206ENST00000579066 FBLN1P23142 703 aa15.89■□□□□ 0.13
CTC1-206ENST00000579066 TERF2IPQ9NYB0 399 aa15.89■□□□□ 0.13
CTC1-206ENST00000579066 PARD3Q8TEW0 1356 aa15.88■□□□□ 0.13
CTC1-206ENST00000579066 NLRP2Q9NX02 1062 aa15.88■□□□□ 0.13
CTC1-206ENST00000579066 ERBB3P21860 1342 aa15.88■□□□□ 0.13
CTC1-206ENST00000579066 ANKRD24Q8TF21 1146 aa15.87■□□□□ 0.13
CTC1-206ENST00000579066 ABCC6O95255 1503 aa15.87■□□□□ 0.13
CTC1-206ENST00000579066 CCDC7Q96M83 1385 aa15.87■□□□□ 0.13
CTC1-206ENST00000579066 EXOC5O00471 708 aa15.86■□□□□ 0.13
CTC1-206ENST00000579066 LTV1Q96GA3 475 aaPredicted RBP15.86■□□□□ 0.13
CTC1-206ENST00000579066 USP47Q96K76 1375 aa15.86■□□□□ 0.13
CTC1-206ENST00000579066 NBPF14Q5TI25 921 aa15.85■□□□□ 0.13
CTC1-206ENST00000579066 PUS7Q96PZ0 661 aaKnown RBP15.85■□□□□ 0.13
CTC1-206ENST00000579066 CDCA7Q9BWT1 371 aaPredicted RBP15.85■□□□□ 0.13
CTC1-206ENST00000579066 ANO8Q9HCE9 1232 aaPredicted RBP15.85■□□□□ 0.13
CTC1-206ENST00000579066 TNS2Q63HR2 1409 aa15.85■□□□□ 0.13
CTC1-206ENST00000579066 KCNQ2O43526 872 aa15.84■□□□□ 0.13
CTC1-206ENST00000579066 ACSBG1Q96GR2 724 aa15.84■□□□□ 0.13
CTC1-206ENST00000579066 PCGF6Q9BYE7 350 aa15.84■□□□□ 0.13
CTC1-206ENST00000579066 BCL11BQ9C0K0 894 aaPredicted RBP15.84■□□□□ 0.13
CTC1-206ENST00000579066 RGPD3A6NKT7 1758 aaPredicted RBP15.83■□□□□ 0.12
CTC1-206ENST00000579066 RGPD4Q7Z3J3 1758 aa15.83■□□□□ 0.12
CTC1-206ENST00000579066 PROM2Q8N271 834 aa15.83■□□□□ 0.12
CTC1-206ENST00000579066 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
CTC1-206ENST00000579066 C11orf95C9JLR9 678 aaPredicted RBP15.82■□□□□ 0.12
CTC1-206ENST00000579066 MAP3K19Q56UN5 1328 aa15.82■□□□□ 0.12
CTC1-206ENST00000579066 PLSCR1O15162 318 aa15.81■□□□□ 0.12
CTC1-206ENST00000579066 IL2RBP14784 551 aa15.81■□□□□ 0.12
CTC1-206ENST00000579066 TMF1P82094 1093 aa15.81■□□□□ 0.12
CTC1-206ENST00000579066 ANKRD36BQ8N2N9 1353 aa15.81■□□□□ 0.12
CTC1-206ENST00000579066 COG3Q96JB2 828 aa15.81■□□□□ 0.12
CTC1-206ENST00000579066 PDGFDQ9GZP0 370 aaPredicted RBP15.81■□□□□ 0.12
CTC1-206ENST00000579066 NINLQ9Y2I6 1382 aa15.81■□□□□ 0.12
CTC1-206ENST00000579066 NHSQ6T4R5 1651 aa15.8■□□□□ 0.12
CTC1-206ENST00000579066 BCL9O00512 1426 aa15.8■□□□□ 0.12
CTC1-206ENST00000579066 IP6K1Q92551 441 aa15.8■□□□□ 0.12
CTC1-206ENST00000579066 GGNBP2Q9H3C7 697 aa15.8■□□□□ 0.12
CTC1-206ENST00000579066 RRS1Q15050 365 aaKnown RBP15.79■□□□□ 0.12
CTC1-206ENST00000579066 HOXC9P31274 260 aa15.78■□□□□ 0.12
CTC1-206ENST00000579066 AMPHP49418 695 aa15.78■□□□□ 0.12
CTC1-206ENST00000579066 TXNRD1Q16881 649 aa15.78■□□□□ 0.12
CTC1-206ENST00000579066 MYOM1P52179 1685 aa15.78■□□□□ 0.12
CTC1-206ENST00000579066 CASZ1Q86V15 1759 aa15.77■□□□□ 0.12
CTC1-206ENST00000579066 FAM208AQ9UK61 1670 aaKnown RBP15.77■□□□□ 0.12
CTC1-206ENST00000579066 FYB1O15117 783 aa15.77■□□□□ 0.12
CTC1-206ENST00000579066 BTAF1O14981 1849 aa15.77■□□□□ 0.11
CTC1-206ENST00000579066 KIF20BQ96Q89 1820 aa15.77■□□□□ 0.11
CTC1-206ENST00000579066 DDX54Q8TDD1 881 aaKnown RBP15.76■□□□□ 0.11
CTC1-206ENST00000579066 SRCAPQ6ZRS2 3230 aa15.76■□□□□ 0.11
CTC1-206ENST00000579066 USHBP1Q8N6Y0 703 aa15.75■□□□□ 0.11
CTC1-206ENST00000579066 CARD14Q9BXL6 1004 aa15.74■□□□□ 0.11
CTC1-206ENST00000579066 SPON1Q9HCB6 807 aa15.74■□□□□ 0.11
CTC1-206ENST00000579066 SHANK3Q9BYB0 1731 aa15.74■□□□□ 0.11
CTC1-206ENST00000579066 MEGF6O75095 1541 aa15.73■□□□□ 0.11
CTC1-206ENST00000579066 KAT6BQ8WYB5 2073 aa15.73■□□□□ 0.11
CTC1-206ENST00000579066 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
CTC1-206ENST00000579066 ZBTB7AO95365 584 aa15.73■□□□□ 0.11
CTC1-206ENST00000579066 PPP1R1BQ9UD71 204 aaPredicted RBP15.73■□□□□ 0.11
CTC1-206ENST00000579066 DOT1LQ8TEK3 1739 aa15.72■□□□□ 0.11
CTC1-206ENST00000579066 POLR3GLQ9BT43 218 aa15.72■□□□□ 0.11
CTC1-206ENST00000579066 STK32BQ9NY57 414 aa15.72■□□□□ 0.11
CTC1-206ENST00000579066 NSD3Q9BZ95 1437 aa15.71■□□□□ 0.11
CTC1-206ENST00000579066 SLC15A2Q16348 729 aa15.71■□□□□ 0.11
CTC1-206ENST00000579066 NBPF6Q5VWK0 638 aa15.71■□□□□ 0.11
CTC1-206ENST00000579066 NBPF4Q96M43 638 aa15.71■□□□□ 0.11
CTC1-206ENST00000579066 ATF5Q9Y2D1 282 aaPredicted RBP15.71■□□□□ 0.11
CTC1-206ENST00000579066 PAPPAQ13219 1627 aa15.7■□□□□ 0.1
CTC1-206ENST00000579066 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
CTC1-206ENST00000579066 KCNQ4P56696 695 aa15.69■□□□□ 0.1
CTC1-206ENST00000579066 CDCA8Q53HL2 280 aa15.69■□□□□ 0.1
CTC1-206ENST00000579066 SYTL4Q96C24 671 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms