RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 PARP4Q9UKK3 1724 aaKnown RBP12.71□□□□□ -0.37
GGA3-207ENST00000578896 WDR17Q8IZU2 1322 aa12.71□□□□□ -0.37
GGA3-207ENST00000578896 LRP5O75197 1615 aa12.71□□□□□ -0.37
GGA3-207ENST00000578896 DDB1Q16531 1140 aa12.71□□□□□ -0.37
GGA3-207ENST00000578896 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
GGA3-207ENST00000578896 MARCH10Q8NA82 808 aaPredicted RBP12.7□□□□□ -0.38
GGA3-207ENST00000578896 KCNH5Q8NCM2 988 aa12.7□□□□□ -0.38
GGA3-207ENST00000578896 SBF2Q86WG5 1849 aa12.69□□□□□ -0.38
GGA3-207ENST00000578896 LRRC37A3O60309 1634 aa12.69□□□□□ -0.38
GGA3-207ENST00000578896 TONSLQ96HA7 1378 aa12.69□□□□□ -0.38
GGA3-207ENST00000578896 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
GGA3-207ENST00000578896 CD163L1Q9NR16 1453 aa12.68□□□□□ -0.38
GGA3-207ENST00000578896 MON2Q7Z3U7 1717 aa12.68□□□□□ -0.38
GGA3-207ENST00000578896 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
GGA3-207ENST00000578896 NFAT5O94916 1531 aa12.67□□□□□ -0.38
GGA3-207ENST00000578896 RREB1Q92766 1687 aa12.67□□□□□ -0.38
GGA3-207ENST00000578896 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
GGA3-207ENST00000578896 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
GGA3-207ENST00000578896 OVOS2A0A0G2JMS6 1433 aa12.67□□□□□ -0.38
GGA3-207ENST00000578896 OVOS2A0A0J9YW53 1432 aa12.67□□□□□ -0.38
GGA3-207ENST00000578896 OVOS2Q6IE36 1432 aa12.67□□□□□ -0.38
GGA3-207ENST00000578896 SBNO2Q9Y2G9 1366 aa12.67□□□□□ -0.38
GGA3-207ENST00000578896 WNK3Q9BYP7 1800 aa12.67□□□□□ -0.38
GGA3-207ENST00000578896 PARD3Q8TEW0 1356 aa12.66□□□□□ -0.38
GGA3-207ENST00000578896 ST20-MTHFSA0A0A6YYL1 179 aa12.65□□□□□ -0.38
GGA3-207ENST00000578896 EXOC5O00471 708 aa12.65□□□□□ -0.38
GGA3-207ENST00000578896 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
GGA3-207ENST00000578896 ANO8Q9HCE9 1232 aaPredicted RBP12.65□□□□□ -0.38
GGA3-207ENST00000578896 NLRP2Q9NX02 1062 aa12.65□□□□□ -0.38
GGA3-207ENST00000578896 KCNQ2O43526 872 aa12.64□□□□□ -0.39
GGA3-207ENST00000578896 FBLN1P23142 703 aa12.64□□□□□ -0.39
GGA3-207ENST00000578896 PROM2Q8N271 834 aa12.64□□□□□ -0.39
GGA3-207ENST00000578896 ACSBG1Q96GR2 724 aa12.64□□□□□ -0.39
GGA3-207ENST00000578896 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
GGA3-207ENST00000578896 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
GGA3-207ENST00000578896 LTN1O94822 1766 aa12.64□□□□□ -0.39
GGA3-207ENST00000578896 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
GGA3-207ENST00000578896 TESK2Q96S53 571 aa12.63□□□□□ -0.39
GGA3-207ENST00000578896 CDCA7Q9BWT1 371 aaPredicted RBP12.63□□□□□ -0.39
GGA3-207ENST00000578896 PDGFDQ9GZP0 370 aaPredicted RBP12.63□□□□□ -0.39
GGA3-207ENST00000578896 A0A1W2PP64 1363 aa12.63□□□□□ -0.39
GGA3-207ENST00000578896 PLSCR1O15162 318 aa12.62□□□□□ -0.39
GGA3-207ENST00000578896 ANKRD24Q8TF21 1146 aa12.62□□□□□ -0.39
GGA3-207ENST00000578896 ERBB3P21860 1342 aa12.62□□□□□ -0.39
GGA3-207ENST00000578896 CCDC7Q96M83 1385 aa12.61□□□□□ -0.39
GGA3-207ENST00000578896 C11orf95C9JLR9 678 aaPredicted RBP12.61□□□□□ -0.39
GGA3-207ENST00000578896 TERF2IPQ9NYB0 399 aa12.61□□□□□ -0.39
GGA3-207ENST00000578896 EDC4Q6P2E9 1401 aaKnown RBP12.6□□□□□ -0.39
GGA3-207ENST00000578896 TRIM26Q12899 539 aaPredicted RBP12.59□□□□□ -0.39
GGA3-207ENST00000578896 TXNRD1Q16881 649 aa12.59□□□□□ -0.39
GGA3-207ENST00000578896 SPON1Q9HCB6 807 aa12.59□□□□□ -0.39
GGA3-207ENST00000578896 PPP1R1BQ9UD71 204 aaPredicted RBP12.59□□□□□ -0.39
GGA3-207ENST00000578896 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
GGA3-207ENST00000578896 ZBTB7AO95365 584 aa12.58□□□□□ -0.4
GGA3-207ENST00000578896 IL2RBP14784 551 aa12.58□□□□□ -0.4
GGA3-207ENST00000578896 TNS2Q63HR2 1409 aa12.58□□□□□ -0.4
GGA3-207ENST00000578896 BCL9O00512 1426 aa12.57□□□□□ -0.4
GGA3-207ENST00000578896 DDX54Q8TDD1 881 aaKnown RBP12.57□□□□□ -0.4
GGA3-207ENST00000578896 IP6K1Q92551 441 aa12.57□□□□□ -0.4
GGA3-207ENST00000578896 PUS7Q96PZ0 661 aaKnown RBP12.57□□□□□ -0.4
GGA3-207ENST00000578896 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
GGA3-207ENST00000578896 MAP3K19Q56UN5 1328 aa12.57□□□□□ -0.4
GGA3-207ENST00000578896 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
GGA3-207ENST00000578896 RGPD2P0DJD1 1756 aa12.56□□□□□ -0.4
GGA3-207ENST00000578896 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
GGA3-207ENST00000578896 COG3Q96JB2 828 aa12.56□□□□□ -0.4
GGA3-207ENST00000578896 ABCC6O95255 1503 aa12.56□□□□□ -0.4
GGA3-207ENST00000578896 AMPHP49418 695 aa12.55□□□□□ -0.4
GGA3-207ENST00000578896 RRS1Q15050 365 aaKnown RBP12.55□□□□□ -0.4
GGA3-207ENST00000578896 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
GGA3-207ENST00000578896 STK32BQ9NY57 414 aa12.55□□□□□ -0.4
GGA3-207ENST00000578896 CASZ1Q86V15 1759 aa12.54□□□□□ -0.4
GGA3-207ENST00000578896 HOXC9P31274 260 aa12.54□□□□□ -0.4
GGA3-207ENST00000578896 SLC15A2Q16348 729 aa12.54□□□□□ -0.4
GGA3-207ENST00000578896 USP47Q96K76 1375 aa12.54□□□□□ -0.4
GGA3-207ENST00000578896 BTAF1O14981 1849 aa12.53□□□□□ -0.4
GGA3-207ENST00000578896 USHBP1Q8N6Y0 703 aa12.53□□□□□ -0.4
GGA3-207ENST00000578896 NHSQ6T4R5 1651 aa12.53□□□□□ -0.4
GGA3-207ENST00000578896 FYB1O15117 783 aa12.52□□□□□ -0.41
GGA3-207ENST00000578896 KCNQ4P56696 695 aa12.52□□□□□ -0.41
GGA3-207ENST00000578896 TMF1P82094 1093 aa12.52□□□□□ -0.41
GGA3-207ENST00000578896 LRRC4BQ9NT99 713 aa12.52□□□□□ -0.41
GGA3-207ENST00000578896 UTRNP46939 3433 aa12.52□□□□□ -0.41
GGA3-207ENST00000578896 PTGER2P43116 358 aa12.51□□□□□ -0.41
GGA3-207ENST00000578896 ZNF827Q17R98 1081 aa12.51□□□□□ -0.41
GGA3-207ENST00000578896 SYTL4Q96C24 671 aaPredicted RBP12.51□□□□□ -0.41
GGA3-207ENST00000578896 PCGF6Q9BYE7 350 aa12.51□□□□□ -0.41
GGA3-207ENST00000578896 ANKRD36BQ8N2N9 1353 aa12.51□□□□□ -0.41
GGA3-207ENST00000578896 NINLQ9Y2I6 1382 aa12.51□□□□□ -0.41
GGA3-207ENST00000578896 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
GGA3-207ENST00000578896 NBPF6Q5VWK0 638 aa12.5□□□□□ -0.41
GGA3-207ENST00000578896 NBPF4Q96M43 638 aa12.5□□□□□ -0.41
GGA3-207ENST00000578896 YY1P25490 414 aa12.49□□□□□ -0.41
GGA3-207ENST00000578896 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
GGA3-207ENST00000578896 MYOM1P52179 1685 aa12.48□□□□□ -0.41
GGA3-207ENST00000578896 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
GGA3-207ENST00000578896 MEGF6O75095 1541 aa12.48□□□□□ -0.41
GGA3-207ENST00000578896 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
GGA3-207ENST00000578896 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
GGA3-207ENST00000578896 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms