RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 NME9Q86XW9 330 aa22.38■■□□□ 1.17
CRLF3-203ENST00000578692 USP31Q70CQ4 1352 aa22.37■■□□□ 1.17
CRLF3-203ENST00000578692 WDR17Q8IZU2 1322 aa22.37■■□□□ 1.17
CRLF3-203ENST00000578692 APBA3O96018 575 aa22.35■■□□□ 1.17
CRLF3-203ENST00000578692 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
CRLF3-203ENST00000578692 NFAT5O94916 1531 aa22.34■■□□□ 1.17
CRLF3-203ENST00000578692 DISP2A7MBM2 1401 aa22.34■■□□□ 1.17
CRLF3-203ENST00000578692 CSB-PGBD3P0DP91 1061 aa22.34■■□□□ 1.17
CRLF3-203ENST00000578692 EZH2Q15910 746 aaKnown RBP22.34■■□□□ 1.17
CRLF3-203ENST00000578692 TNS1Q9HBL0 1735 aaKnown RBP22.34■■□□□ 1.17
CRLF3-203ENST00000578692 PARP4Q9UKK3 1724 aaKnown RBP22.34■■□□□ 1.17
CRLF3-203ENST00000578692 EDC4Q6P2E9 1401 aaKnown RBP22.33■■□□□ 1.17
CRLF3-203ENST00000578692 A0A1W2PP64 1363 aa22.33■■□□□ 1.17
CRLF3-203ENST00000578692 DDB1Q16531 1140 aa22.33■■□□□ 1.17
CRLF3-203ENST00000578692 C11orf95C9JLR9 678 aaPredicted RBP22.32■■□□□ 1.16
CRLF3-203ENST00000578692 CAMKK2Q96RR4 588 aa22.32■■□□□ 1.16
CRLF3-203ENST00000578692 CARD10Q9BWT7 1032 aa22.32■■□□□ 1.16
CRLF3-203ENST00000578692 PCGF6Q9BYE7 350 aa22.32■■□□□ 1.16
CRLF3-203ENST00000578692 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
CRLF3-203ENST00000578692 NINLQ9Y2I6 1382 aa22.3■■□□□ 1.16
CRLF3-203ENST00000578692 PSDA5PKW4 1024 aaPredicted RBP22.3■■□□□ 1.16
CRLF3-203ENST00000578692 TIMELESSQ9UNS1 1208 aa22.3■■□□□ 1.16
CRLF3-203ENST00000578692 USP54Q70EL1 1684 aa22.3■■□□□ 1.16
CRLF3-203ENST00000578692 TMF1P82094 1093 aa22.28■■□□□ 1.16
CRLF3-203ENST00000578692 USP47Q96K76 1375 aa22.28■■□□□ 1.16
CRLF3-203ENST00000578692 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
CRLF3-203ENST00000578692 ABCC6O95255 1503 aa22.27■■□□□ 1.15
CRLF3-203ENST00000578692 OVOS2A0A0G2JMS6 1433 aa22.26■■□□□ 1.15
CRLF3-203ENST00000578692 OVOS2A0A0J9YW53 1432 aa22.26■■□□□ 1.15
CRLF3-203ENST00000578692 OVOS2Q6IE36 1432 aa22.26■■□□□ 1.15
CRLF3-203ENST00000578692 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
CRLF3-203ENST00000578692 LRRC37A3O60309 1634 aa22.25■■□□□ 1.15
CRLF3-203ENST00000578692 EXOC5O00471 708 aa22.25■■□□□ 1.15
CRLF3-203ENST00000578692 R3HDM1Q15032 1099 aaKnown RBP22.25■■□□□ 1.15
CRLF3-203ENST00000578692 CCDC7Q96M83 1385 aa22.24■■□□□ 1.15
CRLF3-203ENST00000578692 MARCH10Q8NA82 808 aaPredicted RBP22.24■■□□□ 1.15
CRLF3-203ENST00000578692 ERBB3P21860 1342 aa22.24■■□□□ 1.15
CRLF3-203ENST00000578692 SRCAPQ6ZRS2 3230 aa22.23■■□□□ 1.15
CRLF3-203ENST00000578692 LTN1O94822 1766 aa22.23■■□□□ 1.15
CRLF3-203ENST00000578692 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
CRLF3-203ENST00000578692 COG3Q96JB2 828 aa22.23■■□□□ 1.15
CRLF3-203ENST00000578692 NLRP2Q9NX02 1062 aa22.23■■□□□ 1.15
CRLF3-203ENST00000578692 PEAK1Q9H792 1746 aa22.22■■□□□ 1.15
CRLF3-203ENST00000578692 ANKRD36BQ8N2N9 1353 aa22.22■■□□□ 1.15
CRLF3-203ENST00000578692 CDCA8Q53HL2 280 aa22.22■■□□□ 1.15
CRLF3-203ENST00000578692 ANKRD24Q8TF21 1146 aa22.22■■□□□ 1.15
CRLF3-203ENST00000578692 IP6K1Q92551 441 aa22.2■■□□□ 1.14
CRLF3-203ENST00000578692 BCL11BQ9C0K0 894 aaPredicted RBP22.19■■□□□ 1.14
CRLF3-203ENST00000578692 SBF2Q86WG5 1849 aa22.19■■□□□ 1.14
CRLF3-203ENST00000578692 PLSCR1O15162 318 aa22.18■■□□□ 1.14
CRLF3-203ENST00000578692 NBPF14Q5TI25 921 aa22.18■■□□□ 1.14
CRLF3-203ENST00000578692 BCL9O00512 1426 aa22.17■■□□□ 1.14
CRLF3-203ENST00000578692 RREB1Q92766 1687 aa22.16■■□□□ 1.14
CRLF3-203ENST00000578692 FYB1O15117 783 aa22.16■■□□□ 1.14
CRLF3-203ENST00000578692 IL2RBP14784 551 aa22.16■■□□□ 1.14
CRLF3-203ENST00000578692 FBLN1P23142 703 aa22.16■■□□□ 1.14
CRLF3-203ENST00000578692 PTF1AQ7RTS3 328 aa22.16■■□□□ 1.14
CRLF3-203ENST00000578692 POTEDQ86YR6 584 aa22.15■■□□□ 1.14
CRLF3-203ENST00000578692 AMPHP49418 695 aa22.14■■□□□ 1.14
CRLF3-203ENST00000578692 LTV1Q96GA3 475 aaPredicted RBP22.14■■□□□ 1.14
CRLF3-203ENST00000578692 LRP5O75197 1615 aa22.14■■□□□ 1.13
CRLF3-203ENST00000578692 MAP3K19Q56UN5 1328 aa22.14■■□□□ 1.13
CRLF3-203ENST00000578692 GGNBP2Q9H3C7 697 aa22.13■■□□□ 1.13
CRLF3-203ENST00000578692 NUP188Q5SRE5 1749 aa22.13■■□□□ 1.13
CRLF3-203ENST00000578692 HOXC9P31274 260 aa22.12■■□□□ 1.13
CRLF3-203ENST00000578692 TNS2Q63HR2 1409 aa22.12■■□□□ 1.13
CRLF3-203ENST00000578692 CCER1Q8TC90 406 aaPredicted RBP22.11■■□□□ 1.13
CRLF3-203ENST00000578692 RRS1Q15050 365 aaKnown RBP22.09■■□□□ 1.13
CRLF3-203ENST00000578692 RGPD3A6NKT7 1758 aaPredicted RBP22.08■■□□□ 1.13
CRLF3-203ENST00000578692 RGPD4Q7Z3J3 1758 aa22.08■■□□□ 1.13
CRLF3-203ENST00000578692 KCNQ2O43526 872 aa22.08■■□□□ 1.12
CRLF3-203ENST00000578692 PROM2Q8N271 834 aa22.08■■□□□ 1.12
CRLF3-203ENST00000578692 CARD14Q9BXL6 1004 aa22.08■■□□□ 1.12
CRLF3-203ENST00000578692 ACSBG1Q96GR2 724 aa22.07■■□□□ 1.12
CRLF3-203ENST00000578692 FAM208AQ9UK61 1670 aaKnown RBP22.06■■□□□ 1.12
CRLF3-203ENST00000578692 TXNRD1Q16881 649 aa22.04■■□□□ 1.12
CRLF3-203ENST00000578692 DDX54Q8TDD1 881 aaKnown RBP22.04■■□□□ 1.12
CRLF3-203ENST00000578692 RTL1A6NKG5 1358 aa22.04■■□□□ 1.12
CRLF3-203ENST00000578692 MYOM1P52179 1685 aa22.03■■□□□ 1.12
CRLF3-203ENST00000578692 EIF4G2P78344 907 aaKnown RBP eCLIP22.02■■□□□ 1.12
CRLF3-203ENST00000578692 KIF20BQ96Q89 1820 aa22.02■■□□□ 1.12
CRLF3-203ENST00000578692 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
CRLF3-203ENST00000578692 POLR3GLQ9BT43 218 aa22.01■■□□□ 1.11
CRLF3-203ENST00000578692 ANO8Q9HCE9 1232 aaPredicted RBP22.01■■□□□ 1.11
CRLF3-203ENST00000578692 NHSQ6T4R5 1651 aa22.01■■□□□ 1.11
CRLF3-203ENST00000578692 RGPD2P0DJD1 1756 aa22.01■■□□□ 1.11
CRLF3-203ENST00000578692 NBPF6Q5VWK0 638 aa22■■□□□ 1.11
CRLF3-203ENST00000578692 NBPF4Q96M43 638 aa22■■□□□ 1.11
CRLF3-203ENST00000578692 HSP90AB2PQ58FF8 381 aa21.99■■□□□ 1.11
CRLF3-203ENST00000578692 KAT6BQ8WYB5 2073 aa21.99■■□□□ 1.11
CRLF3-203ENST00000578692 HSPA5P11021 654 aaKnown RBP21.99■■□□□ 1.11
CRLF3-203ENST00000578692 ZCRB1Q8TBF4 217 aaKnown RBP21.99■■□□□ 1.11
CRLF3-203ENST00000578692 SPON1Q9HCB6 807 aa21.99■■□□□ 1.11
CRLF3-203ENST00000578692 SMG6Q86US8 1419 aaKnown RBP21.98■■□□□ 1.11
CRLF3-203ENST00000578692 INSRP06213 1382 aa21.98■■□□□ 1.11
CRLF3-203ENST00000578692 KIF24Q5T7B8 1368 aa21.97■■□□□ 1.11
CRLF3-203ENST00000578692 STK32BQ9NY57 414 aa21.97■■□□□ 1.11
CRLF3-203ENST00000578692 FLT4P35916 1363 aa21.96■■□□□ 1.11
CRLF3-203ENST00000578692 CGNL1Q0VF96 1302 aa21.96■■□□□ 1.11
CRLF3-203ENST00000578692 USHBP1Q8N6Y0 703 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms