RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 SLC4A1APQ9BWU0 796 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-209ENST00000578663 USP35Q9P2H5 1018 aa10.81□□□□□ -0.68
CDK5RAP3-209ENST00000578663 DHX57Q6P158 1386 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-209ENST00000578663 PRDM11Q9NQV5 511 aa10.8□□□□□ -0.68
CDK5RAP3-209ENST00000578663 ACIN1Q9UKV3 1341 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-209ENST00000578663 SSH2Q76I76 1423 aa10.79□□□□□ -0.68
CDK5RAP3-209ENST00000578663 STRN4Q9NRL3 753 aa10.79□□□□□ -0.68
CDK5RAP3-209ENST00000578663 C11orf95C9JLR9 678 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-209ENST00000578663 C14orf93Q9H972 538 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-209ENST00000578663 LMO7Q8WWI1 1683 aa10.78□□□□□ -0.68
CDK5RAP3-209ENST00000578663 PMFBP1Q8TBY8 1022 aa10.77□□□□□ -0.69
CDK5RAP3-209ENST00000578663 KIAA0232Q92628 1395 aa10.77□□□□□ -0.69
CDK5RAP3-209ENST00000578663 MLLT1Q03111 559 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-209ENST00000578663 CHRNA2Q15822 529 aa10.76□□□□□ -0.69
CDK5RAP3-209ENST00000578663 ZNF827Q17R98 1081 aa10.76□□□□□ -0.69
CDK5RAP3-209ENST00000578663 PRAM1Q96QH2 718 aa10.76□□□□□ -0.69
CDK5RAP3-209ENST00000578663 ITSN1Q15811 1721 aa10.75□□□□□ -0.69
CDK5RAP3-209ENST00000578663 RGL3Q3MIN7 710 aa10.75□□□□□ -0.69
CDK5RAP3-209ENST00000578663 TCP11L2Q8N4U5 519 aa10.75□□□□□ -0.69
CDK5RAP3-209ENST00000578663 RBM46Q8TBY0 533 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-209ENST00000578663 CICQ96RK0 1608 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-209ENST00000578663 ADGRB1O14514 1584 aa10.74□□□□□ -0.69
CDK5RAP3-209ENST00000578663 POLD1P28340 1107 aa10.74□□□□□ -0.69
CDK5RAP3-209ENST00000578663 RGS19P49795 217 aa10.74□□□□□ -0.69
CDK5RAP3-209ENST00000578663 NMRK2Q9NPI5 230 aa10.74□□□□□ -0.69
CDK5RAP3-209ENST00000578663 PRR36Q9H6K5 1346 aa10.74□□□□□ -0.69
CDK5RAP3-209ENST00000578663 NHSQ6T4R5 1651 aa10.73□□□□□ -0.69
CDK5RAP3-209ENST00000578663 LARP1Q6PKG0 1096 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-209ENST00000578663 POGKQ9P215 609 aa10.73□□□□□ -0.69
CDK5RAP3-209ENST00000578663 THRAP3Q9Y2W1 955 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-209ENST00000578663 BCL9O00512 1426 aa10.73□□□□□ -0.69
CDK5RAP3-209ENST00000578663 SAFB2Q14151 953 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDK5RAP3-209ENST00000578663 CPDO75976 1380 aa10.72□□□□□ -0.69
CDK5RAP3-209ENST00000578663 BTAF1O14981 1849 aa10.72□□□□□ -0.69
CDK5RAP3-209ENST00000578663 USP19O94966 1318 aa10.71□□□□□ -0.69
CDK5RAP3-209ENST00000578663 CFAP70Q5T0N1 1121 aa10.71□□□□□ -0.69
CDK5RAP3-209ENST00000578663 NGDNQ8NEJ9 315 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-209ENST00000578663 SLC16A10Q8TF71 515 aa10.71□□□□□ -0.69
CDK5RAP3-209ENST00000578663 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-209ENST00000578663 FSTL1Q12841 308 aa10.7□□□□□ -0.7
CDK5RAP3-209ENST00000578663 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-209ENST00000578663 ABHD8Q96I13 439 aa10.69□□□□□ -0.7
CDK5RAP3-209ENST00000578663 POLR3AO14802 1390 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-209ENST00000578663 PNPLA7Q6ZV29 1317 aa10.68□□□□□ -0.7
CDK5RAP3-209ENST00000578663 EVA1CP58658 441 aa10.68□□□□□ -0.7
CDK5RAP3-209ENST00000578663 MARCH10Q8NA82 808 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-209ENST00000578663 PRDM10Q9NQV6 1147 aa10.68□□□□□ -0.7
CDK5RAP3-209ENST00000578663 COL5A2P05997 1499 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-209ENST00000578663 MINK1Q8N4C8 1332 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-209ENST00000578663 FOXN1O15353 648 aa10.67□□□□□ -0.7
CDK5RAP3-209ENST00000578663 ZC3H6P61129 1189 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-209ENST00000578663 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
CDK5RAP3-209ENST00000578663 HIRIP3Q9BW71 556 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-209ENST00000578663 KAT6BQ8WYB5 2073 aa10.67□□□□□ -0.7
CDK5RAP3-209ENST00000578663 PKD1L3Q7Z443 1732 aa10.67□□□□□ -0.7
CDK5RAP3-209ENST00000578663 CRB1P82279 1406 aa10.67□□□□□ -0.7
CDK5RAP3-209ENST00000578663 MPHOSPH9Q99550 1183 aa10.66□□□□□ -0.7
CDK5RAP3-209ENST00000578663 LRRC4BQ9NT99 713 aa10.66□□□□□ -0.7
CDK5RAP3-209ENST00000578663 TNRC6CQ9HCJ0 1690 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-209ENST00000578663 PIK3C2AO00443 1686 aa10.64□□□□□ -0.71
CDK5RAP3-209ENST00000578663 DDB1Q16531 1140 aa10.64□□□□□ -0.71
CDK5RAP3-209ENST00000578663 TRAK1Q9UPV9 953 aa10.64□□□□□ -0.71
CDK5RAP3-209ENST00000578663 BRD4O60885 1362 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-209ENST00000578663 QRICH2Q9H0J4 1663 aa10.63□□□□□ -0.71
CDK5RAP3-209ENST00000578663 VIRMAQ69YN4 1812 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-209ENST00000578663 NUDT16Q96DE0 195 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-209ENST00000578663 C10orf71Q711Q0 1435 aa10.62□□□□□ -0.71
CDK5RAP3-209ENST00000578663 CD2APQ9Y5K6 639 aa10.62□□□□□ -0.71
CDK5RAP3-209ENST00000578663 TRPM1Q7Z4N2 1603 aa10.62□□□□□ -0.71
CDK5RAP3-209ENST00000578663 KIAA1551Q9HCM1 1747 aa10.61□□□□□ -0.71
CDK5RAP3-209ENST00000578663 PLEKHG3A1L390 1219 aa10.61□□□□□ -0.71
CDK5RAP3-209ENST00000578663 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
CDK5RAP3-209ENST00000578663 CDCA7Q9BWT1 371 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-209ENST00000578663 SLIT3O75094 1523 aa10.61□□□□□ -0.71
CDK5RAP3-209ENST00000578663 PXDNLA1KZ92 1463 aa10.61□□□□□ -0.71
CDK5RAP3-209ENST00000578663 ACEP12821 1306 aa10.6□□□□□ -0.71
CDK5RAP3-209ENST00000578663 GCP02774 474 aa10.6□□□□□ -0.71
CDK5RAP3-209ENST00000578663 NUTM2GQ5VZR2 741 aa10.6□□□□□ -0.71
CDK5RAP3-209ENST00000578663 NLRP13Q86W25 1043 aa10.6□□□□□ -0.71
CDK5RAP3-209ENST00000578663 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-209ENST00000578663 C16orf71Q8IYS4 520 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-209ENST00000578663 ABTB2Q8N961 1025 aa10.6□□□□□ -0.71
CDK5RAP3-209ENST00000578663 CCDC61Q9Y6R9 512 aa10.6□□□□□ -0.71
CDK5RAP3-209ENST00000578663 LY75O60449 1722 aa10.59□□□□□ -0.71
CDK5RAP3-209ENST00000578663 RGPD5Q99666 1765 aa10.59□□□□□ -0.71
CDK5RAP3-209ENST00000578663 IGSF1Q8N6C5 1336 aa10.58□□□□□ -0.71
CDK5RAP3-209ENST00000578663 KCPQ6ZWJ8 1503 aa10.58□□□□□ -0.72
CDK5RAP3-209ENST00000578663 COL18A1P39060 1754 aa10.58□□□□□ -0.72
CDK5RAP3-209ENST00000578663 N4BP2Q86UW6 1770 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-209ENST00000578663 CCDC85CA6NKD9 419 aa10.58□□□□□ -0.72
CDK5RAP3-209ENST00000578663 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.72
CDK5RAP3-209ENST00000578663 SBF1O95248 1867 aa10.57□□□□□ -0.72
CDK5RAP3-209ENST00000578663 BRCA1P38398 1863 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-209ENST00000578663 CTCFP49711 727 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-209ENST00000578663 MSL1Q68DK7 614 aa10.56□□□□□ -0.72
CDK5RAP3-209ENST00000578663 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
CDK5RAP3-209ENST00000578663 CDK19Q9BWU1 502 aa10.56□□□□□ -0.72
CDK5RAP3-209ENST00000578663 ABCC6O95255 1503 aa10.56□□□□□ -0.72
CDK5RAP3-209ENST00000578663 USP54Q70EL1 1684 aa10.56□□□□□ -0.72
CDK5RAP3-209ENST00000578663 KIF13BQ9NQT8 1826 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms