RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 NBPF20Q3BBV1 942 aa8.82□□□□□ -1
TRAPPC8-205ENST00000578658 COG6Q9Y2V7 657 aa8.82□□□□□ -1
TRAPPC8-205ENST00000578658 TIMP2P16035 220 aa8.81□□□□□ -1
TRAPPC8-205ENST00000578658 WDR4P57081 412 aaKnown RBP8.81□□□□□ -1
TRAPPC8-205ENST00000578658 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
TRAPPC8-205ENST00000578658 ABL2P42684 1182 aa8.8□□□□□ -1
TRAPPC8-205ENST00000578658 INTS6LQ5JSJ4 861 aaKnown RBP8.8□□□□□ -1
TRAPPC8-205ENST00000578658 CCDC116Q8IYX3 515 aa8.8□□□□□ -1
TRAPPC8-205ENST00000578658 POM121Q96HA1 1249 aa8.8□□□□□ -1
TRAPPC8-205ENST00000578658 DACH1Q9UI36 760 aa8.8□□□□□ -1
TRAPPC8-205ENST00000578658 PCDHB9Q9Y5E1 797 aa8.8□□□□□ -1
TRAPPC8-205ENST00000578658 ESPNB1AK53 854 aa8.79□□□□□ -1
TRAPPC8-205ENST00000578658 ZNF330Q9Y3S2 320 aaPredicted RBP8.79□□□□□ -1
TRAPPC8-205ENST00000578658 ZIC2O95409 532 aaPredicted RBP8.78□□□□□ -1
TRAPPC8-205ENST00000578658 UBTFP17480 764 aaKnown RBP8.78□□□□□ -1
TRAPPC8-205ENST00000578658 MCCD1P59942 119 aaPredicted RBP8.78□□□□□ -1
TRAPPC8-205ENST00000578658 ITPKCQ96DU7 683 aa8.78□□□□□ -1
TRAPPC8-205ENST00000578658 ZFAND3Q9H8U3 227 aa8.78□□□□□ -1
TRAPPC8-205ENST00000578658 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC8-205ENST00000578658 ZNF592Q92610 1267 aa8.77□□□□□ -1.01
TRAPPC8-205ENST00000578658 ATP13A2Q9NQ11 1180 aa8.77□□□□□ -1.01
TRAPPC8-205ENST00000578658 EMILIN1Q9Y6C2 1016 aa8.77□□□□□ -1.01
TRAPPC8-205ENST00000578658 DHX9Q08211 1270 aaKnown RBP8.76□□□□□ -1.01
TRAPPC8-205ENST00000578658 VAC14Q08AM6 782 aa8.76□□□□□ -1.01
TRAPPC8-205ENST00000578658 WASHC4Q2M389 1173 aa8.76□□□□□ -1.01
TRAPPC8-205ENST00000578658 SEPT12Q8IYM1 358 aa8.76□□□□□ -1.01
TRAPPC8-205ENST00000578658 RAD21O60216 631 aa8.75□□□□□ -1.01
TRAPPC8-205ENST00000578658 GIGYF1O75420 1035 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC8-205ENST00000578658 POTECB2RU33 542 aa8.74□□□□□ -1.01
TRAPPC8-205ENST00000578658 BMP1P13497 986 aa8.74□□□□□ -1.01
TRAPPC8-205ENST00000578658 EIF4G2P78344 907 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRAPPC8-205ENST00000578658 TRIM46Q7Z4K8 759 aa8.74□□□□□ -1.01
TRAPPC8-205ENST00000578658 PGPEP1Q9NXJ5 209 aa8.74□□□□□ -1.01
TRAPPC8-205ENST00000578658 ERVH48-1M5A8F1 160 aa8.73□□□□□ -1.01
TRAPPC8-205ENST00000578658 RAB15P59190 212 aa8.73□□□□□ -1.01
TRAPPC8-205ENST00000578658 GMPR2Q9P2T1 348 aaKnown RBP8.73□□□□□ -1.01
TRAPPC8-205ENST00000578658 MEIOBQ8N635 442 aa8.72□□□□□ -1.01
TRAPPC8-205ENST00000578658 CEP126Q9P2H0 1117 aa8.72□□□□□ -1.01
TRAPPC8-205ENST00000578658 RNF20Q5VTR2 975 aa8.71□□□□□ -1.02
TRAPPC8-205ENST00000578658 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
TRAPPC8-205ENST00000578658 MRPL14Q6P1L8 145 aaKnown RBP8.71□□□□□ -1.02
TRAPPC8-205ENST00000578658 Q6ZVU0 165 aa8.71□□□□□ -1.02
TRAPPC8-205ENST00000578658 CCDC125Q86Z20 511 aa8.71□□□□□ -1.02
TRAPPC8-205ENST00000578658 WWC1Q8IX03 1113 aa8.71□□□□□ -1.02
TRAPPC8-205ENST00000578658 ZNF784Q8NCA9 323 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC8-205ENST00000578658 TMPRSS4Q9NRS4 437 aa8.71□□□□□ -1.02
TRAPPC8-205ENST00000578658 CLUAP1Q96AJ1 413 aa8.7□□□□□ -1.02
TRAPPC8-205ENST00000578658 LILRA1O75019 489 aa8.69□□□□□ -1.02
TRAPPC8-205ENST00000578658 SOX11P35716 441 aa8.69□□□□□ -1.02
TRAPPC8-205ENST00000578658 CBLBQ13191 982 aa8.69□□□□□ -1.02
TRAPPC8-205ENST00000578658 TRIM47Q96LD4 638 aa8.69□□□□□ -1.02
TRAPPC8-205ENST00000578658 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
TRAPPC8-205ENST00000578658 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
TRAPPC8-205ENST00000578658 FNBP4Q8N3X1 1017 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC8-205ENST00000578658 ZFP42Q96MM3 310 aa8.68□□□□□ -1.02
TRAPPC8-205ENST00000578658 C11orf95C9JLR9 678 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC8-205ENST00000578658 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
TRAPPC8-205ENST00000578658 PHTF2Q8N3S3 785 aa8.67□□□□□ -1.02
TRAPPC8-205ENST00000578658 KIFC2Q96AC6 838 aa8.67□□□□□ -1.02
TRAPPC8-205ENST00000578658 PURBQ96QR8 312 aaKnown RBP8.67□□□□□ -1.02
TRAPPC8-205ENST00000578658 A6NJR5 290 aa8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 POM121CA8CG34 1229 aa8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 ADD1P35611 737 aaKnown RBP8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 SCARF1Q14162 830 aa8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 PROSER2Q86WR7 435 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 TRIM52Q96A61 297 aa8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 TSEN34Q9BSV6 310 aaKnown RBP8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 ALG2Q9H553 416 aa8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 CYLDQ9NQC7 956 aa8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 PCDHB11Q9Y5F2 797 aa8.66□□□□□ -1.02
TRAPPC8-205ENST00000578658 UPP2O95045 317 aa8.65□□□□□ -1.02
TRAPPC8-205ENST00000578658 SNRPBP14678 240 aaKnown RBP8.65□□□□□ -1.02
TRAPPC8-205ENST00000578658 ERVK-9P63128 1117 aa8.65□□□□□ -1.02
TRAPPC8-205ENST00000578658 SLFNL1Q499Z3 407 aa8.65□□□□□ -1.02
TRAPPC8-205ENST00000578658 ADH1AP07327 375 aa8.64□□□□□ -1.03
TRAPPC8-205ENST00000578658 BMP2P12643 396 aa8.64□□□□□ -1.03
TRAPPC8-205ENST00000578658 C6orf118Q5T5N4 469 aa8.64□□□□□ -1.03
TRAPPC8-205ENST00000578658 CHIC2Q9UKJ5 165 aa8.64□□□□□ -1.03
TRAPPC8-205ENST00000578658 GTF3C3Q9Y5Q9 886 aa8.64□□□□□ -1.03
TRAPPC8-205ENST00000578658 SCTRP47872 440 aa8.63□□□□□ -1.03
TRAPPC8-205ENST00000578658 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
TRAPPC8-205ENST00000578658 RNF135Q8IUD6 432 aa8.63□□□□□ -1.03
TRAPPC8-205ENST00000578658 KDF1Q8NAX2 398 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC8-205ENST00000578658 ADAMTS19Q8TE59 1207 aa8.63□□□□□ -1.03
TRAPPC8-205ENST00000578658 AGBL1Q96MI9 1066 aa8.63□□□□□ -1.03
TRAPPC8-205ENST00000578658 SPINT1O43278 529 aa8.62□□□□□ -1.03
TRAPPC8-205ENST00000578658 TSGA10IPQ3SY00 556 aa8.62□□□□□ -1.03
TRAPPC8-205ENST00000578658 CDCA7Q9BWT1 371 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC8-205ENST00000578658 RELBQ01201 579 aa8.61□□□□□ -1.03
TRAPPC8-205ENST00000578658 DOLKQ9UPQ8 538 aa8.61□□□□□ -1.03
TRAPPC8-205ENST00000578658 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC8-205ENST00000578658 PIK3CDO00329 1044 aa8.6□□□□□ -1.03
TRAPPC8-205ENST00000578658 TRAK2O60296 914 aa8.6□□□□□ -1.03
TRAPPC8-205ENST00000578658 OSBPL3Q9H4L5 887 aa8.6□□□□□ -1.03
TRAPPC8-205ENST00000578658 PTGIRP43119 386 aa8.59□□□□□ -1.03
TRAPPC8-205ENST00000578658 HDGFL1Q5TGJ6 251 aa8.59□□□□□ -1.03
TRAPPC8-205ENST00000578658 ATP5J2-PTCD1G3V325 749 aa8.58□□□□□ -1.04
TRAPPC8-205ENST00000578658 MAP7D1Q3KQU3 841 aa8.58□□□□□ -1.04
TRAPPC8-205ENST00000578658 CYP2U1Q7Z449 544 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms