RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
SRSF1-202ENST00000578430 ADAMTS8Q9UP79 889 aa17.87■□□□□ 0.45
SRSF1-202ENST00000578430 COL16A1Q07092 1604 aaPredicted RBP17.87■□□□□ 0.45
SRSF1-202ENST00000578430 ARHGEF25Q86VW2 580 aa17.86■□□□□ 0.45
SRSF1-202ENST00000578430 JCADQ9P266 1359 aa17.86■□□□□ 0.45
SRSF1-202ENST00000578430 BLMP54132 1417 aaPredicted RBP17.86■□□□□ 0.45
SRSF1-202ENST00000578430 PNNQ9H307 717 aaKnown RBP17.85■□□□□ 0.45
SRSF1-202ENST00000578430 PEAK1Q9H792 1746 aa17.85■□□□□ 0.45
SRSF1-202ENST00000578430 CRYBG1Q9Y4K1 1723 aa17.84■□□□□ 0.45
SRSF1-202ENST00000578430 HOXC9P31274 260 aa17.84■□□□□ 0.45
SRSF1-202ENST00000578430 IL13P35225 146 aa17.84■□□□□ 0.45
SRSF1-202ENST00000578430 IP6K1Q92551 441 aa17.84■□□□□ 0.45
SRSF1-202ENST00000578430 ABCC6O95255 1503 aa17.83■□□□□ 0.45
SRSF1-202ENST00000578430 HNRNPUQ00839 825 aaKnown RBP eCLIP17.83■□□□□ 0.44
SRSF1-202ENST00000578430 LTN1O94822 1766 aa17.83■□□□□ 0.44
SRSF1-202ENST00000578430 CPDO75976 1380 aa17.82■□□□□ 0.44
SRSF1-202ENST00000578430 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
SRSF1-202ENST00000578430 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.446e-10■■□□□ 11.4
SRSF1-202ENST00000578430 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
SRSF1-202ENST00000578430 LRP6O75581 1613 aa17.81■□□□□ 0.44
SRSF1-202ENST00000578430 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
SRSF1-202ENST00000578430 U2SURPO15042 1029 aaKnown RBP17.81■□□□□ 0.44
SRSF1-202ENST00000578430 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
SRSF1-202ENST00000578430 HSP90AB2PQ58FF8 381 aa17.81■□□□□ 0.44
SRSF1-202ENST00000578430 COL22A1Q8NFW1 1626 aaPredicted RBP17.8■□□□□ 0.44
SRSF1-202ENST00000578430 FCHSD2O94868 740 aa17.8■□□□□ 0.44
SRSF1-202ENST00000578430 RUNDC1Q96C34 613 aa17.79■□□□□ 0.44
SRSF1-202ENST00000578430 RNF216Q9NWF9 866 aaPredicted RBP17.79■□□□□ 0.44
SRSF1-202ENST00000578430 ZBED9Q6R2W3 1325 aa17.78■□□□□ 0.44
SRSF1-202ENST00000578430 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
SRSF1-202ENST00000578430 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
SRSF1-202ENST00000578430 CABLES1Q8TDN4 633 aa17.78■□□□□ 0.44
SRSF1-202ENST00000578430 ABCA3Q99758 1704 aa17.78■□□□□ 0.44
SRSF1-202ENST00000578430 HAP1P54257 671 aaPredicted RBP17.77■□□□□ 0.44
SRSF1-202ENST00000578430 ZC3H6P61129 1189 aaKnown RBP17.77■□□□□ 0.44
SRSF1-202ENST00000578430 RGPD1P0DJD0 1748 aa17.75■□□□□ 0.43
SRSF1-202ENST00000578430 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
SRSF1-202ENST00000578430 PLEKHG5O94827 1062 aa17.75■□□□□ 0.43
SRSF1-202ENST00000578430 NEFMP07197 916 aa17.75■□□□□ 0.43
SRSF1-202ENST00000578430 MEX3CQ5U5Q3 659 aaKnown RBP17.75■□□□□ 0.43
SRSF1-202ENST00000578430 KIAA0232Q92628 1395 aa17.75■□□□□ 0.43
SRSF1-202ENST00000578430 IGSF1Q8N6C5 1336 aa17.74■□□□□ 0.43
SRSF1-202ENST00000578430 ZBTB7CA1YPR0 619 aa17.74■□□□□ 0.43
SRSF1-202ENST00000578430 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
SRSF1-202ENST00000578430 COL18A1P39060 1754 aa17.74■□□□□ 0.43
SRSF1-202ENST00000578430 MAPK8IP3Q9UPT6 1336 aa17.73■□□□□ 0.43
SRSF1-202ENST00000578430 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
SRSF1-202ENST00000578430 CCDC146Q8IYE0 955 aa17.73■□□□□ 0.43
SRSF1-202ENST00000578430 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
SRSF1-202ENST00000578430 KDRP35968 1356 aa17.72■□□□□ 0.43
SRSF1-202ENST00000578430 EYA1Q99502 592 aa17.72■□□□□ 0.43
SRSF1-202ENST00000578430 PRDM11Q9NQV5 511 aa17.72■□□□□ 0.43
SRSF1-202ENST00000578430 APAF1O14727 1248 aa17.71■□□□□ 0.43
SRSF1-202ENST00000578430 SULT6B1Q6IMI4 303 aa17.71■□□□□ 0.43
SRSF1-202ENST00000578430 ANKRD24Q8TF21 1146 aa17.71■□□□□ 0.43
SRSF1-202ENST00000578430 PRKAR2BP31323 418 aa17.7■□□□□ 0.42
SRSF1-202ENST00000578430 ZNF772Q68DY9 489 aaPredicted RBP17.7■□□□□ 0.42
SRSF1-202ENST00000578430 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
SRSF1-202ENST00000578430 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
SRSF1-202ENST00000578430 ERBB3P21860 1342 aa17.7■□□□□ 0.42
SRSF1-202ENST00000578430 LMO7Q8WWI1 1683 aa17.69■□□□□ 0.42
SRSF1-202ENST00000578430 FAM208AQ9UK61 1670 aaKnown RBP17.69■□□□□ 0.42
SRSF1-202ENST00000578430 HMOX1P09601 288 aa17.69■□□□□ 0.42
SRSF1-202ENST00000578430 PDE3BQ13370 1112 aa17.69■□□□□ 0.42
SRSF1-202ENST00000578430 LTV1Q96GA3 475 aaPredicted RBP17.69■□□□□ 0.42
SRSF1-202ENST00000578430 NCAPD2Q15021 1401 aa17.69■□□□□ 0.42
SRSF1-202ENST00000578430 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-202ENST00000578430 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-202ENST00000578430 CCDC27Q2M243 656 aa17.68■□□□□ 0.42
SRSF1-202ENST00000578430 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-202ENST00000578430 CHRNA2Q15822 529 aa17.67■□□□□ 0.42
SRSF1-202ENST00000578430 UPF1Q92900 1129 aaKnown RBP eCLIP17.67■□□□□ 0.42
SRSF1-202ENST00000578430 CAMTA1Q9Y6Y1 1673 aa17.67■□□□□ 0.42
SRSF1-202ENST00000578430 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
SRSF1-202ENST00000578430 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
SRSF1-202ENST00000578430 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
SRSF1-202ENST00000578430 NBPF6Q5VWK0 638 aa17.66■□□□□ 0.42
SRSF1-202ENST00000578430 NBPF4Q96M43 638 aa17.66■□□□□ 0.42
SRSF1-202ENST00000578430 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
SRSF1-202ENST00000578430 FAM83GA6ND36 823 aa17.65■□□□□ 0.42
SRSF1-202ENST00000578430 AEBP1Q8IUX7 1158 aa17.65■□□□□ 0.42
SRSF1-202ENST00000578430 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
SRSF1-202ENST00000578430 WDR17Q8IZU2 1322 aa17.64■□□□□ 0.41
SRSF1-202ENST00000578430 ZNF521Q96K83 1311 aa17.64■□□□□ 0.41
SRSF1-202ENST00000578430 COL5A2P05997 1499 aaPredicted RBP17.63■□□□□ 0.41
SRSF1-202ENST00000578430 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
SRSF1-202ENST00000578430 RXRBP28702 533 aa17.63■□□□□ 0.41
SRSF1-202ENST00000578430 LMOD3Q0VAK6 560 aa17.63■□□□□ 0.41
SRSF1-202ENST00000578430 PHACTR3Q96KR7 559 aa17.62■□□□□ 0.41
SRSF1-202ENST00000578430 SALL2Q9Y467 1007 aaPredicted RBP17.62■□□□□ 0.41
SRSF1-202ENST00000578430 AFF2P51816 1311 aa17.62■□□□□ 0.41
SRSF1-202ENST00000578430 WDR63Q8IWG1 891 aa17.61■□□□□ 0.41
SRSF1-202ENST00000578430 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
SRSF1-202ENST00000578430 GAS2L2Q8NHY3 880 aa17.61■□□□□ 0.41
SRSF1-202ENST00000578430 NLRP2Q9NX02 1062 aa17.61■□□□□ 0.41
SRSF1-202ENST00000578430 RIPK4P57078 832 aa17.6■□□□□ 0.41
SRSF1-202ENST00000578430 EVA1CP58658 441 aa17.6■□□□□ 0.41
SRSF1-202ENST00000578430 GOLGA2Q08379 1002 aa17.6■□□□□ 0.41
SRSF1-202ENST00000578430 RGPD2P0DJD1 1756 aa17.6■□□□□ 0.41
SRSF1-202ENST00000578430 NEUROD2Q15784 382 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms