RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 TTC21AQ8NDW8 1320 aa35.62■■■■□ 3.29
THRA-208ENST00000578218 SBF2Q86WG5 1849 aa35.62■■■■□ 3.29
THRA-208ENST00000578218 SOX12O15370 315 aa35.61■■■■□ 3.29
THRA-208ENST00000578218 RGPD3A6NKT7 1758 aaPredicted RBP35.61■■■■□ 3.29
THRA-208ENST00000578218 RGPD4Q7Z3J3 1758 aa35.61■■■■□ 3.29
THRA-208ENST00000578218 C11orf95C9JLR9 678 aaPredicted RBP35.6■■■■□ 3.29
THRA-208ENST00000578218 KCNH5Q8NCM2 988 aa35.6■■■■□ 3.29
THRA-208ENST00000578218 KTN1Q86UP2 1357 aaKnown RBP35.6■■■■□ 3.29
THRA-208ENST00000578218 WDR17Q8IZU2 1322 aa35.59■■■■□ 3.29
THRA-208ENST00000578218 NFAT5O94916 1531 aa35.59■■■■□ 3.29
THRA-208ENST00000578218 SBNO2Q9Y2G9 1366 aa35.57■■■■□ 3.28
THRA-208ENST00000578218 DDB1Q16531 1140 aa35.57■■■■□ 3.28
THRA-208ENST00000578218 ABCC6O95255 1503 aa35.56■■■■□ 3.28
THRA-208ENST00000578218 USP54Q70EL1 1684 aa35.55■■■■□ 3.28
THRA-208ENST00000578218 NBPF14Q5TI25 921 aa35.54■■■■□ 3.28
THRA-208ENST00000578218 ARHGEF25Q86VW2 580 aa35.54■■■■□ 3.28
THRA-208ENST00000578218 AXIN2Q9Y2T1 843 aa35.54■■■■□ 3.28
THRA-208ENST00000578218 CSB-PGBD3P0DP91 1061 aa35.53■■■■□ 3.28
THRA-208ENST00000578218 CARD11Q9BXL7 1154 aa35.52■■■■□ 3.28
THRA-208ENST00000578218 LTN1O94822 1766 aa35.5■■■■□ 3.27
THRA-208ENST00000578218 CDCA7Q9BWT1 371 aaPredicted RBP35.49■■■■□ 3.27
THRA-208ENST00000578218 TONSLQ96HA7 1378 aa35.49■■■■□ 3.27
THRA-208ENST00000578218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.46■■■■□ 3.27
THRA-208ENST00000578218 CD163L1Q9NR16 1453 aa35.45■■■■□ 3.27
THRA-208ENST00000578218 CARD10Q9BWT7 1032 aa35.44■■■■□ 3.26
THRA-208ENST00000578218 CCDC7Q96M83 1385 aa35.43■■■■□ 3.26
THRA-208ENST00000578218 TMC1Q8TDI8 760 aa35.43■■■■□ 3.26
THRA-208ENST00000578218 USP31Q70CQ4 1352 aa35.41■■■■□ 3.26
THRA-208ENST00000578218 TNS2Q63HR2 1409 aa35.4■■■■□ 3.26
THRA-208ENST00000578218 HDGFL2Q7Z4V5 671 aaPredicted RBP35.4■■■■□ 3.26
THRA-208ENST00000578218 MARCH10Q8NA82 808 aaPredicted RBP35.4■■■■□ 3.26
THRA-208ENST00000578218 BCL9O00512 1426 aa35.4■■■■□ 3.26
THRA-208ENST00000578218 BCL11BQ9C0K0 894 aaPredicted RBP35.39■■■■□ 3.26
THRA-208ENST00000578218 NME9Q86XW9 330 aa35.38■■■■□ 3.25
THRA-208ENST00000578218 EDC4Q6P2E9 1401 aaKnown RBP35.38■■■■□ 3.25
THRA-208ENST00000578218 PLSCR1O15162 318 aa35.37■■■■□ 3.25
THRA-208ENST00000578218 NHSQ6T4R5 1651 aa35.34■■■■□ 3.25
THRA-208ENST00000578218 CASZ1Q86V15 1759 aa35.33■■■■□ 3.25
THRA-208ENST00000578218 EXOC5O00471 708 aa35.33■■■■□ 3.25
THRA-208ENST00000578218 PTF1AQ7RTS3 328 aa35.33■■■■□ 3.25
THRA-208ENST00000578218 A0A1W2PP64 1363 aa35.33■■■■□ 3.25
THRA-208ENST00000578218 ERBB3P21860 1342 aa35.32■■■■□ 3.25
THRA-208ENST00000578218 SLC12A5Q9H2X9 1139 aa35.31■■■■□ 3.24
THRA-208ENST00000578218 SPON1Q9HCB6 807 aa35.31■■■■□ 3.24
THRA-208ENST00000578218 PPP1R1BQ9UD71 204 aaPredicted RBP35.31■■■■□ 3.24
THRA-208ENST00000578218 TERF2IPQ9NYB0 399 aa35.3■■■■□ 3.24
THRA-208ENST00000578218 ANO8Q9HCE9 1232 aaPredicted RBP35.29■■■■□ 3.24
THRA-208ENST00000578218 NLRP2Q9NX02 1062 aa35.28■■■■□ 3.24
THRA-208ENST00000578218 FAM208AQ9UK61 1670 aaKnown RBP35.27■■■■□ 3.24
THRA-208ENST00000578218 KCNQ2O43526 872 aa35.27■■■■□ 3.24
THRA-208ENST00000578218 NINLQ9Y2I6 1382 aa35.24■■■■□ 3.23
THRA-208ENST00000578218 ANKRD24Q8TF21 1146 aa35.23■■■■□ 3.23
THRA-208ENST00000578218 PUS7Q96PZ0 661 aaKnown RBP35.22■■■■□ 3.23
THRA-208ENST00000578218 IL2RBP14784 551 aa35.21■■■■□ 3.23
THRA-208ENST00000578218 BTAF1O14981 1849 aa35.19■■■■□ 3.22
THRA-208ENST00000578218 TXNRD1Q16881 649 aa35.19■■■■□ 3.22
THRA-208ENST00000578218 PROM2Q8N271 834 aa35.18■■■■□ 3.22
THRA-208ENST00000578218 ACSBG1Q96GR2 724 aa35.17■■■■□ 3.22
THRA-208ENST00000578218 STK32BQ9NY57 414 aa35.17■■■■□ 3.22
THRA-208ENST00000578218 MYOM1P52179 1685 aa35.15■■■■□ 3.22
THRA-208ENST00000578218 ST20-MTHFSA0A0A6YYL1 179 aa35.15■■■■□ 3.22
THRA-208ENST00000578218 TESK2Q96S53 571 aa35.14■■■■□ 3.22
THRA-208ENST00000578218 PAPPAQ13219 1627 aa35.11■■■■□ 3.21
THRA-208ENST00000578218 ZBTB7AO95365 584 aa35.1■■■■□ 3.21
THRA-208ENST00000578218 COG3Q96JB2 828 aa35.1■■■■□ 3.21
THRA-208ENST00000578218 PDGFDQ9GZP0 370 aaPredicted RBP35.1■■■■□ 3.21
THRA-208ENST00000578218 KAT6BQ8WYB5 2073 aa35.1■■■■□ 3.21
THRA-208ENST00000578218 SLC24A1O60721 1099 aa35.09■■■■□ 3.21
THRA-208ENST00000578218 IP6K1Q92551 441 aa35.09■■■■□ 3.21
THRA-208ENST00000578218 LTV1Q96GA3 475 aaPredicted RBP35.09■■■■□ 3.21
THRA-208ENST00000578218 DCAF8L1A6NGE4 600 aa35.08■■■■□ 3.21
THRA-208ENST00000578218 SLC15A2Q16348 729 aa35.08■■■■□ 3.21
THRA-208ENST00000578218 ANKRD36BQ8N2N9 1353 aa35.08■■■■□ 3.21
THRA-208ENST00000578218 RGPD2P0DJD1 1756 aa35.07■■■■□ 3.2
THRA-208ENST00000578218 DOT1LQ8TEK3 1739 aa35.05■■■■□ 3.2
THRA-208ENST00000578218 KIF20BQ96Q89 1820 aa35.04■■■■□ 3.2
THRA-208ENST00000578218 MAP3K19Q56UN5 1328 aa35.03■■■■□ 3.2
THRA-208ENST00000578218 USP47Q96K76 1375 aa35.02■■■■□ 3.2
THRA-208ENST00000578218 AMPHP49418 695 aa35.02■■■■□ 3.2
THRA-208ENST00000578218 SHANK3Q9BYB0 1731 aa35.01■■■■□ 3.2
THRA-208ENST00000578218 YY1P25490 414 aa35.01■■■■□ 3.2
THRA-208ENST00000578218 ATF5Q9Y2D1 282 aaPredicted RBP35.01■■■■□ 3.2
THRA-208ENST00000578218 HOXC9P31274 260 aa35■■■■□ 3.19
THRA-208ENST00000578218 RTL1A6NKG5 1358 aa35■■■■□ 3.19
THRA-208ENST00000578218 TMF1P82094 1093 aa34.99■■■■□ 3.19
THRA-208ENST00000578218 DDX54Q8TDD1 881 aaKnown RBP34.99■■■■□ 3.19
THRA-208ENST00000578218 PTGER2P43116 358 aa34.97■■■■□ 3.19
THRA-208ENST00000578218 MTFR1LQ9H019 292 aa34.96■■■■□ 3.19
THRA-208ENST00000578218 TRIM26Q12899 539 aaPredicted RBP34.95■■■■□ 3.19
THRA-208ENST00000578218 FBLN1P23142 703 aa34.94■■■■□ 3.18
THRA-208ENST00000578218 MEGF6O75095 1541 aa34.94■■■■□ 3.18
THRA-208ENST00000578218 QSER1Q2KHR3 1735 aa34.93■■■■□ 3.18
THRA-208ENST00000578218 SMG6Q86US8 1419 aaKnown RBP34.93■■■■□ 3.18
THRA-208ENST00000578218 RRS1Q15050 365 aaKnown RBP34.9■■■■□ 3.18
THRA-208ENST00000578218 ZNF827Q17R98 1081 aa34.9■■■■□ 3.18
THRA-208ENST00000578218 SYTL4Q96C24 671 aaPredicted RBP34.9■■■■□ 3.18
THRA-208ENST00000578218 GGNBP2Q9H3C7 697 aa34.9■■■■□ 3.18
THRA-208ENST00000578218 LY75O60449 1722 aa34.89■■■■□ 3.18
THRA-208ENST00000578218 TUBGCP6Q96RT7 1819 aa34.88■■■■□ 3.17
THRA-208ENST00000578218 LRRC4BQ9NT99 713 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms