RNA–Protein interactions for RNA: ENST00000577887.1

SNORD53B-201, Transcript of small nucleolar RNA, C/D box 53B, humanhuman

BASIC

Gene SNORD53B, Length 78 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53B-201ENST00000577887 POLR3AO14802 1390 aaPredicted RBP2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 KTN1Q86UP2 1357 aaKnown RBP2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 CCDC7Q96M83 1385 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 COL14A1Q05707 1796 aaKnown RBP2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 RGPD1P0DJD0 1748 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 ITSN1Q15811 1721 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 KNDC1Q76NI1 1749 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 FMN2Q9NZ56 1722 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 NRXN3Q9Y4C0 1643 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 DLC1Q96QB1 1528 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 SPATA31E1Q6ZUB1 1445 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 SSH2Q76I76 1423 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 NSD3Q9BZ95 1437 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 WASHC2AQ641Q2 1341 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 WDR17Q8IZU2 1322 aa2.17□□□□□ -2.06
SNORD53B-201ENST00000577887 CPDO75976 1380 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 AATKQ6ZMQ8 1374 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 USP47Q96K76 1375 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 PPM1GO15355 546 aaPredicted RBP2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 NEFMP07197 916 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 SLC15A2Q16348 729 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 ANKRD24Q8TF21 1146 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 SMARCC1Q92922 1105 aaPredicted RBP2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 ACSBG1Q96GR2 724 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 ARXQ96QS3 562 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 CAMKK2Q96RR4 588 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 SPG7Q9UQ90 795 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 ATF5Q9Y2D1 282 aaPredicted RBP2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 IFT172Q9UG01 1749 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 MARF1Q9Y4F3 1742 aaKnown RBP2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 DISP2A7MBM2 1401 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 CGNL1Q0VF96 1302 aa2.16□□□□□ -2.06
SNORD53B-201ENST00000577887 HSP90AB1P08238 724 aaKnown RBP2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 TXNRD1Q16881 649 aa2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 C1orf141Q5JVX7 400 aa2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 ARHGEF25Q86VW2 580 aa2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 ZCRB1Q8TBF4 217 aaKnown RBP2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 FHDC1Q9C0D6 1143 aaPredicted RBP2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 TMX4Q9H1E5 349 aaPredicted RBP2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 GPBP1L1Q9HC44 474 aaPredicted RBP2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 CCNL1Q9UK58 526 aaPredicted RBP2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 USP6P35125 1406 aa2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 PLCH1Q4KWH8 1693 aa2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 USP19O94966 1318 aa2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 TTC21BQ7Z4L5 1316 aa2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 PCDH11XQ9BZA7 1347 aa2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 PCDH11YQ9BZA8 1340 aa2.15□□□□□ -2.07
SNORD53B-201ENST00000577887 LRP5O75197 1615 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 PHF14O94880 888 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 C1QTNF8P60827 252 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 NBPF1Q3BBV0 1214 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 MPRIPQ6WCQ1 1025 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 MARCH10Q8NA82 808 aaPredicted RBP2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 ZNF784Q8NCA9 323 aaPredicted RBP2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 IP6K1Q92551 441 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 L3MBTL2Q969R5 705 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 PUS7Q96PZ0 661 aaKnown RBP2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 SYT17Q9BSW7 474 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 CCDC87Q9NVE4 849 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 TMOD3Q9NYL9 352 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 PARP3Q9Y6F1 533 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 CPSF1Q10570 1443 aaKnown RBP2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 GLI3P10071 1580 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 ERBB3P21860 1342 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 PRR36Q9H6K5 1346 aa2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 COL5A2P05997 1499 aaPredicted RBP2.14□□□□□ -2.07
SNORD53B-201ENST00000577887 RGPD8O14715 1765 aaPredicted RBP2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 BRWD3Q6RI45 1802 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 ZPR1O75312 459 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 RFC4P35249 363 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 ATP6V1AP38606 617 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 PRIM1P49642 420 aaKnown RBP2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 PLEKHO1Q53GL0 409 aaPredicted RBP2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 NME9Q86XW9 330 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 IFNL2Q8IZJ0 200 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 TTC5Q8N0Z6 440 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 ZNF526Q8TF50 670 aaPredicted RBP2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 RBM42Q9BTD8 480 aaKnown RBP2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 BCS1LQ9Y276 419 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 RTCBQ9Y3I0 505 aaKnown RBP2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 KNSTRNQ9Y448 316 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 TNS2Q63HR2 1409 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 EDC4Q6P2E9 1401 aaKnown RBP2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 KDM2BQ8NHM5 1336 aa2.13□□□□□ -2.07
SNORD53B-201ENST00000577887 ALS2Q96Q42 1657 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 QRICH2Q9H0J4 1663 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 RTL1A6NKG5 1358 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 KIAA1210Q9ULL0 1709 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 GNPATO15228 680 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 FCHSD2O94868 740 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 SSFA2P28290 1259 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 GTF2E1P29083 439 aaPredicted RBP2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 HOXC9P31274 260 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 APLP1P51693 650 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 CABP4P57796 275 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 EIF4G2P78344 907 aaKnown RBP eCLIP2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 TRIM26Q12899 539 aaPredicted RBP2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 AMOTQ4VCS5 1084 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 TRAPPC3LQ5T215 181 aa2.12□□□□□ -2.07
SNORD53B-201ENST00000577887 MSL1Q68DK7 614 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms