RNA–Protein interactions for RNA: ENST00000577536.1

CDH8-204, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 324 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-204ENST00000577536 ZFAND3Q9H8U3 227 aa6.51□□□□□ -1.37
CDH8-204ENST00000577536 ZC3H4Q9UPT8 1303 aaKnown RBP6.5□□□□□ -1.37
CDH8-204ENST00000577536 FSHRP23945 695 aa6.5□□□□□ -1.37
CDH8-204ENST00000577536 VEGFBP49765 207 aa6.5□□□□□ -1.37
CDH8-204ENST00000577536 ITPKCQ96DU7 683 aa6.5□□□□□ -1.37
CDH8-204ENST00000577536 HMX1Q9NP08 348 aaPredicted RBP6.5□□□□□ -1.37
CDH8-204ENST00000577536 SCARF1Q14162 830 aa6.49□□□□□ -1.37
CDH8-204ENST00000577536 EPS8L1Q8TE68 723 aa6.49□□□□□ -1.37
CDH8-204ENST00000577536 PTK2Q05397 1052 aa6.48□□□□□ -1.37
CDH8-204ENST00000577536 TPRNQ4KMQ1 711 aa6.48□□□□□ -1.37
CDH8-204ENST00000577536 ZBTB33Q86T24 672 aa6.48□□□□□ -1.37
CDH8-204ENST00000577536 KCTD17Q8N5Z5 321 aa6.48□□□□□ -1.37
CDH8-204ENST00000577536 PNMA1Q8ND90 353 aa6.48□□□□□ -1.37
CDH8-204ENST00000577536 SLC10A4Q96EP9 437 aa6.48□□□□□ -1.37
CDH8-204ENST00000577536 PURBQ96QR8 312 aaKnown RBP6.48□□□□□ -1.37
CDH8-204ENST00000577536 GPSM3Q9Y4H4 160 aa6.48□□□□□ -1.37
CDH8-204ENST00000577536 TMEM259Q4ZIN3 620 aa6.47□□□□□ -1.37
CDH8-204ENST00000577536 CCDC116Q8IYX3 515 aa6.47□□□□□ -1.37
CDH8-204ENST00000577536 OCSTAMPQ9BR26 566 aa6.47□□□□□ -1.37
CDH8-204ENST00000577536 CDV3Q9UKY7 258 aaKnown RBP6.47□□□□□ -1.37
CDH8-204ENST00000577536 EMILIN1Q9Y6C2 1016 aa6.47□□□□□ -1.37
CDH8-204ENST00000577536 MEIOBQ8N635 442 aa6.46□□□□□ -1.38
CDH8-204ENST00000577536 KCTD15Q96SI1 283 aaPredicted RBP6.46□□□□□ -1.38
CDH8-204ENST00000577536 NXF1Q9UBU9 619 aaKnown RBP6.46□□□□□ -1.38
CDH8-204ENST00000577536 ADAM32Q8TC27 787 aa6.45□□□□□ -1.38
CDH8-204ENST00000577536 UPP2O95045 317 aa6.44□□□□□ -1.38
CDH8-204ENST00000577536 C6orf118Q5T5N4 469 aa6.44□□□□□ -1.38
CDH8-204ENST00000577536 PPP1R26Q5T8A7 1209 aaPredicted RBP6.44□□□□□ -1.38
CDH8-204ENST00000577536 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
CDH8-204ENST00000577536 IRF7Q92985 503 aa6.44□□□□□ -1.38
CDH8-204ENST00000577536 TRIM34Q9BYJ4 488 aa6.44□□□□□ -1.38
CDH8-204ENST00000577536 BMP2P12643 396 aa6.43□□□□□ -1.38
CDH8-204ENST00000577536 NPAS3Q8IXF0 933 aa6.43□□□□□ -1.38
CDH8-204ENST00000577536 PGPEP1Q9NXJ5 209 aa6.43□□□□□ -1.38
CDH8-204ENST00000577536 SOBPA7XYQ1 873 aa6.42□□□□□ -1.38
CDH8-204ENST00000577536 DHX9Q08211 1270 aaKnown RBP6.42□□□□□ -1.38
CDH8-204ENST00000577536 GJD4Q96KN9 370 aaPredicted RBP6.42□□□□□ -1.38
CDH8-204ENST00000577536 TSEN34Q9BSV6 310 aaKnown RBP6.42□□□□□ -1.38
CDH8-204ENST00000577536 ERBB4Q15303 1308 aa6.42□□□□□ -1.38
CDH8-204ENST00000577536 H3BM21 787 aa6.41□□□□□ -1.38
CDH8-204ENST00000577536 MAN1A2O60476 641 aa6.41□□□□□ -1.38
CDH8-204ENST00000577536 CBLBQ13191 982 aa6.41□□□□□ -1.38
CDH8-204ENST00000577536 NBPF20Q3BBV1 942 aa6.41□□□□□ -1.38
CDH8-204ENST00000577536 INTS6LQ5JSJ4 861 aaKnown RBP6.41□□□□□ -1.38
CDH8-204ENST00000577536 Q6ZVU0 165 aa6.41□□□□□ -1.38
CDH8-204ENST00000577536 DZIP3Q86Y13 1208 aaKnown RBP6.4□□□□□ -1.38
CDH8-204ENST00000577536 SOS2Q07890 1332 aaPredicted RBP6.4□□□□□ -1.39
CDH8-204ENST00000577536 BANK1Q8NDB2 785 aa6.39□□□□□ -1.39
CDH8-204ENST00000577536 ZBBXA8MT70 800 aa6.38□□□□□ -1.39
CDH8-204ENST00000577536 RAB15P59190 212 aa6.38□□□□□ -1.39
CDH8-204ENST00000577536 DNMT3LQ9UJW3 386 aa6.38□□□□□ -1.39
CDH8-204ENST00000577536 TTLL8A6PVC2 850 aa6.37□□□□□ -1.39
CDH8-204ENST00000577536 ESPNB1AK53 854 aa6.37□□□□□ -1.39
CDH8-204ENST00000577536 SOCS7O14512 581 aa6.37□□□□□ -1.39
CDH8-204ENST00000577536 SPINT1O43278 529 aa6.37□□□□□ -1.39
CDH8-204ENST00000577536 FBXO45P0C2W1 286 aa6.37□□□□□ -1.39
CDH8-204ENST00000577536 TMPRSS4Q9NRS4 437 aa6.37□□□□□ -1.39
CDH8-204ENST00000577536 ERVH48-1M5A8F1 160 aa6.36□□□□□ -1.39
CDH8-204ENST00000577536 ZNF784Q8NCA9 323 aaPredicted RBP6.36□□□□□ -1.39
CDH8-204ENST00000577536 MTMR14Q8NCE2 650 aa6.36□□□□□ -1.39
CDH8-204ENST00000577536 AGBL1Q96MI9 1066 aa6.36□□□□□ -1.39
CDH8-204ENST00000577536 GSK3AP49840 483 aa6.35□□□□□ -1.39
CDH8-204ENST00000577536 KCNMA1Q12791 1236 aa6.35□□□□□ -1.39
CDH8-204ENST00000577536 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.35□□□□□ -1.39
CDH8-204ENST00000577536 SEPT12Q8IYM1 358 aa6.35□□□□□ -1.39
CDH8-204ENST00000577536 PCDHB9Q9Y5E1 797 aa6.35□□□□□ -1.39
CDH8-204ENST00000577536 NDUFB9Q9Y6M9 179 aa6.35□□□□□ -1.39
CDH8-204ENST00000577536 FIGNL2A6NMB9 653 aa6.34□□□□□ -1.39
CDH8-204ENST00000577536 APBB1O00213 710 aa6.34□□□□□ -1.39
CDH8-204ENST00000577536 GPR37L1O60883 481 aa6.34□□□□□ -1.39
CDH8-204ENST00000577536 LILRA1O75019 489 aa6.34□□□□□ -1.39
CDH8-204ENST00000577536 VSIG8P0DPA2 414 aa6.34□□□□□ -1.39
CDH8-204ENST00000577536 RELBQ01201 579 aa6.34□□□□□ -1.39
CDH8-204ENST00000577536 SNRKQ9NRH2 765 aa6.34□□□□□ -1.39
CDH8-204ENST00000577536 PPFIA3O75145 1194 aa6.33□□□□□ -1.4
CDH8-204ENST00000577536 GIGYF1O75420 1035 aaPredicted RBP6.33□□□□□ -1.4
CDH8-204ENST00000577536 ADH1AP07327 375 aa6.33□□□□□ -1.4
CDH8-204ENST00000577536 NR1H3Q13133 447 aa6.33□□□□□ -1.4
CDH8-204ENST00000577536 INSM2Q96T92 566 aaPredicted RBP6.33□□□□□ -1.4
CDH8-204ENST00000577536 ADD1P35611 737 aaKnown RBP6.32□□□□□ -1.4
CDH8-204ENST00000577536 CTSOP43234 321 aaPredicted RBP6.32□□□□□ -1.4
CDH8-204ENST00000577536 PTSQ03393 145 aa6.32□□□□□ -1.4
CDH8-204ENST00000577536 XP32Q5T750 250 aa6.32□□□□□ -1.4
CDH8-204ENST00000577536 TMEM151AQ8N4L1 468 aa6.32□□□□□ -1.4
CDH8-204ENST00000577536 TRIM52Q96A61 297 aa6.32□□□□□ -1.4
CDH8-204ENST00000577536 ZNF395Q9H8N7 513 aaPredicted RBP6.32□□□□□ -1.4
CDH8-204ENST00000577536 CYLDQ9NQC7 956 aa6.32□□□□□ -1.4
CDH8-204ENST00000577536 GDF11O95390 407 aa6.31□□□□□ -1.4
CDH8-204ENST00000577536 MCCD1P59942 119 aaPredicted RBP6.31□□□□□ -1.4
CDH8-204ENST00000577536 CCDC125Q86Z20 511 aa6.31□□□□□ -1.4
CDH8-204ENST00000577536 KDF1Q8NAX2 398 aaPredicted RBP6.31□□□□□ -1.4
CDH8-204ENST00000577536 ZNF592Q92610 1267 aa6.31□□□□□ -1.4
CDH8-204ENST00000577536 POLMQ9NP87 494 aaPredicted RBP6.31□□□□□ -1.4
CDH8-204ENST00000577536 ZNF330Q9Y3S2 320 aaPredicted RBP6.31□□□□□ -1.4
CDH8-204ENST00000577536 PTGIRP43119 386 aa6.3□□□□□ -1.4
CDH8-204ENST00000577536 RNF20Q5VTR2 975 aa6.3□□□□□ -1.4
CDH8-204ENST00000577536 RNF217Q8TC41 542 aa6.3□□□□□ -1.4
CDH8-204ENST00000577536 PRKCSHP14314 528 aaPredicted RBP6.29□□□□□ -1.4
CDH8-204ENST00000577536 RASSF7Q02833 373 aa6.29□□□□□ -1.4
CDH8-204ENST00000577536 SLC35F4A4IF30 521 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms