RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 CGNL1Q0VF96 1302 aa13.49□□□□□ -0.25
NDE1-212ENST00000577101 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
NDE1-212ENST00000577101 FAM208AQ9UK61 1670 aaKnown RBP13.48□□□□□ -0.25
NDE1-212ENST00000577101 THSD7AQ9UPZ6 1657 aa13.48□□□□□ -0.25
NDE1-212ENST00000577101 RRS1Q15050 365 aaKnown RBP13.48□□□□□ -0.25
NDE1-212ENST00000577101 QTRT2Q9H974 415 aaKnown RBP13.48□□□□□ -0.25
NDE1-212ENST00000577101 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
NDE1-212ENST00000577101 ZNF772Q68DY9 489 aaPredicted RBP13.47□□□□□ -0.25
NDE1-212ENST00000577101 RGS12O14924 1447 aa13.47□□□□□ -0.25
NDE1-212ENST00000577101 NSD2O96028 1365 aa13.46□□□□□ -0.25
NDE1-212ENST00000577101 VPS72Q15906 364 aa13.46□□□□□ -0.25
NDE1-212ENST00000577101 LARP1Q6PKG0 1096 aaKnown RBP13.46□□□□□ -0.25
NDE1-212ENST00000577101 EMILIN1Q9Y6C2 1016 aa13.46□□□□□ -0.25
NDE1-212ENST00000577101 SMG6Q86US8 1419 aaKnown RBP13.46□□□□□ -0.26
NDE1-212ENST00000577101 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
NDE1-212ENST00000577101 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
NDE1-212ENST00000577101 KNSTRNQ9Y448 316 aa13.45□□□□□ -0.26
NDE1-212ENST00000577101 SPATA31A5Q5VU36 1347 aa13.44□□□□□ -0.26
NDE1-212ENST00000577101 SPATA31A7Q8IWB4 1347 aa13.44□□□□□ -0.26
NDE1-212ENST00000577101 HOXC9P31274 260 aa13.44□□□□□ -0.26
NDE1-212ENST00000577101 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
NDE1-212ENST00000577101 GJD4Q96KN9 370 aaPredicted RBP13.44□□□□□ -0.26
NDE1-212ENST00000577101 STRN4Q9NRL3 753 aa13.44□□□□□ -0.26
NDE1-212ENST00000577101 POLKQ9UBT6 870 aa13.44□□□□□ -0.26
NDE1-212ENST00000577101 SPATA31A1Q5TZJ5 1347 aa13.43□□□□□ -0.26
NDE1-212ENST00000577101 CC2D1BQ5T0F9 858 aaKnown RBP13.43□□□□□ -0.26
NDE1-212ENST00000577101 IP6K1Q92551 441 aa13.43□□□□□ -0.26
NDE1-212ENST00000577101 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
NDE1-212ENST00000577101 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
NDE1-212ENST00000577101 ERBB3P21860 1342 aa13.42□□□□□ -0.26
NDE1-212ENST00000577101 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
NDE1-212ENST00000577101 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
NDE1-212ENST00000577101 PARP4Q9UKK3 1724 aaKnown RBP13.42□□□□□ -0.26
NDE1-212ENST00000577101 BLMP54132 1417 aaPredicted RBP13.42□□□□□ -0.26
NDE1-212ENST00000577101 CRB1P82279 1406 aa13.42□□□□□ -0.26
NDE1-212ENST00000577101 ZNF316A6NFI3 1004 aaPredicted RBP13.42□□□□□ -0.26
NDE1-212ENST00000577101 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
NDE1-212ENST00000577101 RBM6P78332 1123 aaKnown RBP13.42□□□□□ -0.26
NDE1-212ENST00000577101 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
NDE1-212ENST00000577101 WDR17Q8IZU2 1322 aa13.41□□□□□ -0.26
NDE1-212ENST00000577101 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
NDE1-212ENST00000577101 DISP2A7MBM2 1401 aa13.4□□□□□ -0.26
NDE1-212ENST00000577101 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
NDE1-212ENST00000577101 RXRBP28702 533 aa13.4□□□□□ -0.26
NDE1-212ENST00000577101 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
NDE1-212ENST00000577101 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
NDE1-212ENST00000577101 INSRP06213 1382 aa13.4□□□□□ -0.26
NDE1-212ENST00000577101 FLT4P35916 1363 aa13.4□□□□□ -0.26
NDE1-212ENST00000577101 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
NDE1-212ENST00000577101 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
NDE1-212ENST00000577101 KIF24Q5T7B8 1368 aa13.39□□□□□ -0.27
NDE1-212ENST00000577101 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
NDE1-212ENST00000577101 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
NDE1-212ENST00000577101 AMPHP49418 695 aa13.38□□□□□ -0.27
NDE1-212ENST00000577101 EVA1CP58658 441 aa13.37□□□□□ -0.27
NDE1-212ENST00000577101 FAM98CQ17RN3 349 aaKnown RBP13.37□□□□□ -0.27
NDE1-212ENST00000577101 LTV1Q96GA3 475 aaPredicted RBP13.37□□□□□ -0.27
NDE1-212ENST00000577101 USP35Q9P2H5 1018 aa13.37□□□□□ -0.27
NDE1-212ENST00000577101 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
NDE1-212ENST00000577101 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
NDE1-212ENST00000577101 CCDC9Q9Y3X0 531 aaKnown RBP13.36□□□□□ -0.27
NDE1-212ENST00000577101 MEGF6O75095 1541 aa13.35□□□□□ -0.27
NDE1-212ENST00000577101 BARGINQ6ZT62 677 aa13.35□□□□□ -0.27
NDE1-212ENST00000577101 TOM1L2Q6ZVM7 507 aa13.35□□□□□ -0.27
NDE1-212ENST00000577101 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
NDE1-212ENST00000577101 CARD10Q9BWT7 1032 aa13.35□□□□□ -0.27
NDE1-212ENST00000577101 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
NDE1-212ENST00000577101 PKD1L3Q7Z443 1732 aa13.34□□□□□ -0.27
NDE1-212ENST00000577101 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
NDE1-212ENST00000577101 MTHFSP49914 203 aa13.34□□□□□ -0.27
NDE1-212ENST00000577101 EIF4A2Q14240 407 aaKnown RBP13.34□□□□□ -0.27
NDE1-212ENST00000577101 TCP11L2Q8N4U5 519 aa13.34□□□□□ -0.27
NDE1-212ENST00000577101 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
NDE1-212ENST00000577101 PPP2R1AP30153 589 aa13.33□□□□□ -0.28
NDE1-212ENST00000577101 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
NDE1-212ENST00000577101 EYA1Q99502 592 aa13.32□□□□□ -0.28
NDE1-212ENST00000577101 NLRP2Q9NX02 1062 aa13.32□□□□□ -0.28
NDE1-212ENST00000577101 THRAP3Q9Y2W1 955 aaKnown RBP13.32□□□□□ -0.28
NDE1-212ENST00000577101 IL13P35225 146 aa13.31□□□□□ -0.28
NDE1-212ENST00000577101 FAM182BQ5T319 152 aa13.31□□□□□ -0.28
NDE1-212ENST00000577101 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
NDE1-212ENST00000577101 IGSF1Q8N6C5 1336 aa13.3□□□□□ -0.28
NDE1-212ENST00000577101 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
NDE1-212ENST00000577101 TNS2Q63HR2 1409 aa13.29□□□□□ -0.28
NDE1-212ENST00000577101 TOGARAM1Q9Y4F4 1720 aa13.28□□□□□ -0.28
NDE1-212ENST00000577101 VIRMAQ69YN4 1812 aaKnown RBP13.28□□□□□ -0.28
NDE1-212ENST00000577101 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
NDE1-212ENST00000577101 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.29
NDE1-212ENST00000577101 EP400Q96L91 3159 aa13.27□□□□□ -0.29
NDE1-212ENST00000577101 IL2RBP14784 551 aa13.26□□□□□ -0.29
NDE1-212ENST00000577101 KDRP35968 1356 aa13.26□□□□□ -0.29
NDE1-212ENST00000577101 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
NDE1-212ENST00000577101 MARCH10Q8NA82 808 aaPredicted RBP13.26□□□□□ -0.29
NDE1-212ENST00000577101 DOT1LQ8TEK3 1739 aa13.26□□□□□ -0.29
NDE1-212ENST00000577101 A0A0G2JS52 829 aa13.24□□□□□ -0.29
NDE1-212ENST00000577101 MYT1Q01538 1121 aa13.24□□□□□ -0.29
NDE1-212ENST00000577101 RALBP1Q15311 655 aa13.24□□□□□ -0.29
NDE1-212ENST00000577101 CCDC184Q52MB2 194 aa13.24□□□□□ -0.29
NDE1-212ENST00000577101 ITGB4P16144 1822 aa13.24□□□□□ -0.29
NDE1-212ENST00000577101 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms