RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MSH6P52701 1360 aa9.45□□□□□ -0.9
NUP88-212ENST00000576708 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
NUP88-212ENST00000576708 SLAIN2Q9P270 581 aa9.44□□□□□ -0.9
NUP88-212ENST00000576708 PTPRUQ92729 1446 aa9.43□□□□□ -0.9
NUP88-212ENST00000576708 PSDA5PKW4 1024 aaPredicted RBP9.43□□□□□ -0.9
NUP88-212ENST00000576708 C6orf132Q5T0Z8 1188 aa9.43□□□□□ -0.9
NUP88-212ENST00000576708 C14orf37Q86TY3 774 aa9.43□□□□□ -0.9
NUP88-212ENST00000576708 RRBP1Q9P2E9 1410 aaKnown RBP9.42□□□□□ -0.9
NUP88-212ENST00000576708 GPR37O15354 613 aa9.42□□□□□ -0.9
NUP88-212ENST00000576708 ZNF326Q5BKZ1 582 aaKnown RBP9.42□□□□□ -0.9
NUP88-212ENST00000576708 AMOTL2Q9Y2J4 779 aa9.42□□□□□ -0.9
NUP88-212ENST00000576708 NAIPQ13075 1403 aa9.41□□□□□ -0.9
NUP88-212ENST00000576708 POTEAQ6S8J7 498 aa9.41□□□□□ -0.9
NUP88-212ENST00000576708 SPHKAPQ2M3C7 1700 aa9.4□□□□□ -0.9
NUP88-212ENST00000576708 FCHSD2O94868 740 aa9.4□□□□□ -0.9
NUP88-212ENST00000576708 PTGDRQ13258 359 aa9.4□□□□□ -0.9
NUP88-212ENST00000576708 TRIM52Q96A61 297 aa9.4□□□□□ -0.9
NUP88-212ENST00000576708 BCL2L12Q9HB09 334 aa9.4□□□□□ -0.9
NUP88-212ENST00000576708 NPDC1Q9NQX5 325 aaPredicted RBP9.4□□□□□ -0.9
NUP88-212ENST00000576708 NRXN3Q9Y4C0 1643 aa9.4□□□□□ -0.9
NUP88-212ENST00000576708 PHLPP1O60346 1717 aa9.39□□□□□ -0.91
NUP88-212ENST00000576708 CLTCL1P53675 1640 aa9.39□□□□□ -0.91
NUP88-212ENST00000576708 DIP2AQ14689 1571 aa9.39□□□□□ -0.91
NUP88-212ENST00000576708 ZMYND10O75800 440 aa9.39□□□□□ -0.91
NUP88-212ENST00000576708 FECHP22830 423 aa9.39□□□□□ -0.91
NUP88-212ENST00000576708 HS3ST6Q96QI5 342 aa9.39□□□□□ -0.91
NUP88-212ENST00000576708 KCNK17Q96T54 332 aa9.39□□□□□ -0.91
NUP88-212ENST00000576708 C19orf44Q9H6X5 657 aa9.39□□□□□ -0.91
NUP88-212ENST00000576708 TRPM2O94759 1503 aa9.39□□□□□ -0.91
NUP88-212ENST00000576708 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.39□□□□□ -0.91
NUP88-212ENST00000576708 METP08581 1390 aa9.38□□□□□ -0.91
NUP88-212ENST00000576708 PIK3R4Q99570 1358 aa9.38□□□□□ -0.91
NUP88-212ENST00000576708 ATF3P18847 181 aa9.38□□□□□ -0.91
NUP88-212ENST00000576708 COL9A1P20849 921 aa9.38□□□□□ -0.91
NUP88-212ENST00000576708 AXIN2Q9Y2T1 843 aa9.38□□□□□ -0.91
NUP88-212ENST00000576708 NCOA3Q9Y6Q9 1424 aa9.38□□□□□ -0.91
NUP88-212ENST00000576708 NEXMIFQ5QGS0 1516 aa9.37□□□□□ -0.91
NUP88-212ENST00000576708 PTPREP23469 700 aa9.37□□□□□ -0.91
NUP88-212ENST00000576708 PSEN2P49810 448 aa9.37□□□□□ -0.91
NUP88-212ENST00000576708 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
NUP88-212ENST00000576708 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
NUP88-212ENST00000576708 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
NUP88-212ENST00000576708 COL16A1Q07092 1604 aaPredicted RBP9.37□□□□□ -0.91
NUP88-212ENST00000576708 SETBP1Q9Y6X0 1596 aa9.37□□□□□ -0.91
NUP88-212ENST00000576708 JCADQ9P266 1359 aa9.37□□□□□ -0.91
NUP88-212ENST00000576708 BRINP3Q76B58 766 aa9.36□□□□□ -0.91
NUP88-212ENST00000576708 KRI1Q8N9T8 703 aaKnown RBP9.36□□□□□ -0.91
NUP88-212ENST00000576708 XRN1Q8IZH2 1706 aaKnown RBP9.36□□□□□ -0.91
NUP88-212ENST00000576708 LRP6O75581 1613 aa9.35□□□□□ -0.91
NUP88-212ENST00000576708 HFM1A2PYH4 1435 aa9.35□□□□□ -0.91
NUP88-212ENST00000576708 GNPATO15228 680 aa9.35□□□□□ -0.91
NUP88-212ENST00000576708 HIC1Q14526 733 aa9.35□□□□□ -0.91
NUP88-212ENST00000576708 DDX17Q92841 729 aaKnown RBP9.34□□□□□ -0.91
NUP88-212ENST00000576708 MST1RQ04912 1400 aa9.33□□□□□ -0.92
NUP88-212ENST00000576708 NUTM2BA6NNL0 878 aaPredicted RBP9.33□□□□□ -0.92
NUP88-212ENST00000576708 NUTM2EB1AL46 878 aaPredicted RBP9.33□□□□□ -0.92
NUP88-212ENST00000576708 PADI6Q6TGC4 694 aa9.33□□□□□ -0.92
NUP88-212ENST00000576708 NUTM2AQ8IVF1 878 aaPredicted RBP9.33□□□□□ -0.92
NUP88-212ENST00000576708 ZNF687Q8N1G0 1237 aa9.33□□□□□ -0.92
NUP88-212ENST00000576708 AHDC1Q5TGY3 1603 aaPredicted RBP9.33□□□□□ -0.92
NUP88-212ENST00000576708 KIF1BO60333 1816 aa9.33□□□□□ -0.92
NUP88-212ENST00000576708 PPP1R3GB7ZBB8 358 aa9.32□□□□□ -0.92
NUP88-212ENST00000576708 MEX3CQ5U5Q3 659 aaKnown RBP9.32□□□□□ -0.92
NUP88-212ENST00000576708 DMRTA1Q5VZB9 504 aa9.32□□□□□ -0.92
NUP88-212ENST00000576708 ASXL1Q8IXJ9 1541 aa9.31□□□□□ -0.92
NUP88-212ENST00000576708 ARHGAP33O14559 1287 aa9.31□□□□□ -0.92
NUP88-212ENST00000576708 FAM161AQ3B820 660 aa9.31□□□□□ -0.92
NUP88-212ENST00000576708 CDCA7LQ96GN5 454 aa9.31□□□□□ -0.92
NUP88-212ENST00000576708 ROBO2Q9HCK4 1378 aa9.31□□□□□ -0.92
NUP88-212ENST00000576708 NALCNQ8IZF0 1738 aa9.31□□□□□ -0.92
NUP88-212ENST00000576708 DCCP43146 1447 aa9.31□□□□□ -0.92
NUP88-212ENST00000576708 ADGRL3Q9HAR2 1447 aa9.31□□□□□ -0.92
NUP88-212ENST00000576708 SPATA31A6Q5VVP1 1343 aa9.31□□□□□ -0.92
NUP88-212ENST00000576708 PRSS12P56730 875 aa9.3□□□□□ -0.92
NUP88-212ENST00000576708 PROX2Q3B8N5 592 aa9.3□□□□□ -0.92
NUP88-212ENST00000576708 RGL3Q3MIN7 710 aa9.3□□□□□ -0.92
NUP88-212ENST00000576708 SETD1AO15047 1707 aaKnown RBP9.3□□□□□ -0.92
NUP88-212ENST00000576708 ADGRF5Q8IZF2 1346 aa9.3□□□□□ -0.92
NUP88-212ENST00000576708 ORAI2Q96SN7 254 aa9.29□□□□□ -0.92
NUP88-212ENST00000576708 MPHOSPH9Q99550 1183 aa9.29□□□□□ -0.92
NUP88-212ENST00000576708 FAM198AQ9UFP1 575 aa9.29□□□□□ -0.92
NUP88-212ENST00000576708 SHPRHQ149N8 1683 aa9.29□□□□□ -0.92
NUP88-212ENST00000576708 RPGRIP1LQ68CZ1 1315 aa9.29□□□□□ -0.92
NUP88-212ENST00000576708 MAP2K5Q13163 448 aa9.28□□□□□ -0.92
NUP88-212ENST00000576708 CCDC102AQ96A19 550 aa9.28□□□□□ -0.92
NUP88-212ENST00000576708 TSKSQ9UJT2 592 aa9.28□□□□□ -0.92
NUP88-212ENST00000576708 MINK1Q8N4C8 1332 aaPredicted RBP9.28□□□□□ -0.92
NUP88-212ENST00000576708 C1orf167Q5SNV9 1468 aa9.28□□□□□ -0.92
NUP88-212ENST00000576708 NHSL1Q5SYE7 1610 aa9.27□□□□□ -0.92
NUP88-212ENST00000576708 PPLO60437 1756 aa9.27□□□□□ -0.92
NUP88-212ENST00000576708 IRF6O14896 467 aa9.27□□□□□ -0.93
NUP88-212ENST00000576708 STK26Q9P289 416 aa9.27□□□□□ -0.93
NUP88-212ENST00000576708 SETD5Q9C0A6 1442 aa9.27□□□□□ -0.93
NUP88-212ENST00000576708 PNPLA6Q8IY17 1366 aa9.26□□□□□ -0.93
NUP88-212ENST00000576708 CCDC144AA2RUR9 1427 aa9.26□□□□□ -0.93
NUP88-212ENST00000576708 PTCH1Q13635 1447 aa9.26□□□□□ -0.93
NUP88-212ENST00000576708 PBX2P40425 430 aa9.26□□□□□ -0.93
NUP88-212ENST00000576708 ZNF772Q68DY9 489 aaPredicted RBP9.26□□□□□ -0.93
NUP88-212ENST00000576708 TMEM132EQ6IEE7 984 aa9.26□□□□□ -0.93
NUP88-212ENST00000576708 WAPLQ7Z5K2 1190 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms