RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 HSPA1AP0DMV8 641 aaKnown RBP11.04□□□□□ -0.64
RAB40B-210ENST00000576148 HSPA1BP0DMV9 641 aaKnown RBP11.04□□□□□ -0.64
RAB40B-210ENST00000576148 CDCA7Q9BWT1 371 aaPredicted RBP11.04□□□□□ -0.64
RAB40B-210ENST00000576148 POGKQ9P215 609 aa11.04□□□□□ -0.64
RAB40B-210ENST00000576148 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
RAB40B-210ENST00000576148 KNDC1Q76NI1 1749 aa11.03□□□□□ -0.64
RAB40B-210ENST00000576148 CPDO75976 1380 aa11.03□□□□□ -0.64
RAB40B-210ENST00000576148 EIF3AQ14152 1382 aaKnown RBP11.03□□□□□ -0.64
RAB40B-210ENST00000576148 TOM1L2Q6ZVM7 507 aa11.02□□□□□ -0.65
RAB40B-210ENST00000576148 C16orf71Q8IYS4 520 aaPredicted RBP11.02□□□□□ -0.65
RAB40B-210ENST00000576148 AKT1S1Q96B36 256 aa11.02□□□□□ -0.65
RAB40B-210ENST00000576148 WDR90Q96KV7 1748 aa11.01□□□□□ -0.65
RAB40B-210ENST00000576148 FSTL1Q12841 308 aa11.01□□□□□ -0.65
RAB40B-210ENST00000576148 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
RAB40B-210ENST00000576148 TFCP2L1Q9NZI6 479 aa11.01□□□□□ -0.65
RAB40B-210ENST00000576148 CD2APQ9Y5K6 639 aa11.01□□□□□ -0.65
RAB40B-210ENST00000576148 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
RAB40B-210ENST00000576148 PPLO60437 1756 aa11□□□□□ -0.65
RAB40B-210ENST00000576148 COL5A2P05997 1499 aaPredicted RBP11□□□□□ -0.65
RAB40B-210ENST00000576148 EXOC5O00471 708 aa11□□□□□ -0.65
RAB40B-210ENST00000576148 LRRC4BQ9NT99 713 aa11□□□□□ -0.65
RAB40B-210ENST00000576148 TOPAZ1Q8N9V7 1692 aa11□□□□□ -0.65
RAB40B-210ENST00000576148 PRR36Q9H6K5 1346 aa11□□□□□ -0.65
RAB40B-210ENST00000576148 PCNTO95613 3336 aa11□□□□□ -0.65
RAB40B-210ENST00000576148 LRRC37A3O60309 1634 aa10.99□□□□□ -0.65
RAB40B-210ENST00000576148 RGL3Q3MIN7 710 aa10.99□□□□□ -0.65
RAB40B-210ENST00000576148 HIRIP3Q9BW71 556 aaPredicted RBP10.99□□□□□ -0.65
RAB40B-210ENST00000576148 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
RAB40B-210ENST00000576148 ZBTB7CA1YPR0 619 aa10.98□□□□□ -0.65
RAB40B-210ENST00000576148 MSH5O43196 834 aa10.98□□□□□ -0.65
RAB40B-210ENST00000576148 GCP02774 474 aa10.98□□□□□ -0.65
RAB40B-210ENST00000576148 ABTB2Q8N961 1025 aa10.98□□□□□ -0.65
RAB40B-210ENST00000576148 ACSBG1Q96GR2 724 aa10.98□□□□□ -0.65
RAB40B-210ENST00000576148 NMRK2Q9NPI5 230 aa10.98□□□□□ -0.65
RAB40B-210ENST00000576148 PAPPAQ13219 1627 aa10.98□□□□□ -0.65
RAB40B-210ENST00000576148 SLC27A3Q5K4L6 730 aa10.97□□□□□ -0.65
RAB40B-210ENST00000576148 C14orf93Q9H972 538 aaKnown RBP10.97□□□□□ -0.65
RAB40B-210ENST00000576148 BRD4O60885 1362 aaPredicted RBP10.97□□□□□ -0.65
RAB40B-210ENST00000576148 LMO7Q8WWI1 1683 aa10.97□□□□□ -0.65
RAB40B-210ENST00000576148 TULP4Q9NRJ4 1543 aa10.96□□□□□ -0.65
RAB40B-210ENST00000576148 TNS2Q63HR2 1409 aa10.96□□□□□ -0.65
RAB40B-210ENST00000576148 MINK1Q8N4C8 1332 aaPredicted RBP10.96□□□□□ -0.65
RAB40B-210ENST00000576148 WASLO00401 505 aaPredicted RBP10.96□□□□□ -0.65
RAB40B-210ENST00000576148 PIK3C2GO75747 1445 aa10.95□□□□□ -0.66
RAB40B-210ENST00000576148 ITGAEP38570 1179 aa10.95□□□□□ -0.66
RAB40B-210ENST00000576148 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
RAB40B-210ENST00000576148 COL24A1Q17RW2 1714 aa10.95□□□□□ -0.66
RAB40B-210ENST00000576148 ARHGEF28Q8N1W1 1705 aaKnown RBP10.95□□□□□ -0.66
RAB40B-210ENST00000576148 USP6P35125 1406 aa10.94□□□□□ -0.66
RAB40B-210ENST00000576148 USP19O94966 1318 aa10.94□□□□□ -0.66
RAB40B-210ENST00000576148 WDR17Q8IZU2 1322 aa10.93□□□□□ -0.66
RAB40B-210ENST00000576148 IGSF1Q8N6C5 1336 aa10.93□□□□□ -0.66
RAB40B-210ENST00000576148 MLLT1Q03111 559 aaPredicted RBP10.93□□□□□ -0.66
RAB40B-210ENST00000576148 CFAP70Q5T0N1 1121 aa10.93□□□□□ -0.66
RAB40B-210ENST00000576148 MSL1Q68DK7 614 aa10.93□□□□□ -0.66
RAB40B-210ENST00000576148 NUDT16Q96DE0 195 aaKnown RBP10.92□□□□□ -0.66
RAB40B-210ENST00000576148 CARD10Q9BWT7 1032 aa10.92□□□□□ -0.66
RAB40B-210ENST00000576148 AKAP12Q02952 1782 aa10.91□□□□□ -0.66
RAB40B-210ENST00000576148 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
RAB40B-210ENST00000576148 COL23A1Q86Y22 540 aaPredicted RBP10.91□□□□□ -0.66
RAB40B-210ENST00000576148 ACEP12821 1306 aa10.9□□□□□ -0.66
RAB40B-210ENST00000576148 SMC1BQ8NDV3 1235 aa10.9□□□□□ -0.66
RAB40B-210ENST00000576148 PRDM10Q9NQV6 1147 aa10.9□□□□□ -0.66
RAB40B-210ENST00000576148 NHSQ6T4R5 1651 aa10.89□□□□□ -0.67
RAB40B-210ENST00000576148 KCNQ4P56696 695 aa10.89□□□□□ -0.67
RAB40B-210ENST00000576148 SLC4A1APQ9BWU0 796 aaKnown RBP10.89□□□□□ -0.67
RAB40B-210ENST00000576148 TRAK1Q9UPV9 953 aa10.89□□□□□ -0.67
RAB40B-210ENST00000576148 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
RAB40B-210ENST00000576148 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
RAB40B-210ENST00000576148 KDM2BQ8NHM5 1336 aa10.87□□□□□ -0.67
RAB40B-210ENST00000576148 ABHD8Q96I13 439 aa10.87□□□□□ -0.67
RAB40B-210ENST00000576148 POLR3AO14802 1390 aaPredicted RBP10.87□□□□□ -0.67
RAB40B-210ENST00000576148 SPATA31E1Q6ZUB1 1445 aa10.86□□□□□ -0.67
RAB40B-210ENST00000576148 ARHGAP27Q6ZUM4 889 aa10.86□□□□□ -0.67
RAB40B-210ENST00000576148 RRAGCQ9HB90 399 aa10.86□□□□□ -0.67
RAB40B-210ENST00000576148 FOXN1O15353 648 aa10.85□□□□□ -0.67
RAB40B-210ENST00000576148 RGS19P49795 217 aa10.85□□□□□ -0.67
RAB40B-210ENST00000576148 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
RAB40B-210ENST00000576148 CCDC7Q96M83 1385 aa10.85□□□□□ -0.67
RAB40B-210ENST00000576148 PLEKHG3A1L390 1219 aa10.84□□□□□ -0.67
RAB40B-210ENST00000576148 CTCFP49711 727 aaPredicted RBP10.84□□□□□ -0.67
RAB40B-210ENST00000576148 NLRP6P59044 892 aa10.84□□□□□ -0.67
RAB40B-210ENST00000576148 FLAD1Q8NFF5 587 aa10.84□□□□□ -0.67
RAB40B-210ENST00000576148 CCNL1Q9UK58 526 aaPredicted RBP10.84□□□□□ -0.67
RAB40B-210ENST00000576148 BTAF1O14981 1849 aa10.84□□□□□ -0.67
RAB40B-210ENST00000576148 PLEKHG2Q9H7P9 1386 aa10.83□□□□□ -0.68
RAB40B-210ENST00000576148 AIDAQ96BJ3 306 aa10.83□□□□□ -0.68
RAB40B-210ENST00000576148 PPIP5K1Q6PFW1 1433 aa10.83□□□□□ -0.68
RAB40B-210ENST00000576148 WNK3Q9BYP7 1800 aa10.82□□□□□ -0.68
RAB40B-210ENST00000576148 CCDC85CA6NKD9 419 aa10.82□□□□□ -0.68
RAB40B-210ENST00000576148 C9orf131Q5VYM1 1079 aa10.82□□□□□ -0.68
RAB40B-210ENST00000576148 SYTL4Q96C24 671 aaPredicted RBP10.82□□□□□ -0.68
RAB40B-210ENST00000576148 CDK19Q9BWU1 502 aa10.82□□□□□ -0.68
RAB40B-210ENST00000576148 BCS1LQ9Y276 419 aa10.82□□□□□ -0.68
RAB40B-210ENST00000576148 CICQ96RK0 1608 aaPredicted RBP10.82□□□□□ -0.68
RAB40B-210ENST00000576148 C10orf71Q711Q0 1435 aa10.82□□□□□ -0.68
RAB40B-210ENST00000576148 TRPM1Q7Z4N2 1603 aa10.81□□□□□ -0.68
RAB40B-210ENST00000576148 IL2RBP14784 551 aa10.81□□□□□ -0.68
RAB40B-210ENST00000576148 HMGB2P26583 209 aaKnown RBP10.81□□□□□ -0.68
RAB40B-210ENST00000576148 ITSN1Q15811 1721 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms