RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 THSD7AQ9UPZ6 1657 aa10.92□□□□□ -0.66
CCDC40-215ENST00000576033 TNNT2P45379 298 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-215ENST00000576033 QTRT2Q9H974 415 aaKnown RBP10.91□□□□□ -0.66
CCDC40-215ENST00000576033 FAM208AQ9UK61 1670 aaKnown RBP10.91□□□□□ -0.66
CCDC40-215ENST00000576033 MAP3K19Q56UN5 1328 aa10.9□□□□□ -0.66
CCDC40-215ENST00000576033 LARP1Q6PKG0 1096 aaKnown RBP10.9□□□□□ -0.66
CCDC40-215ENST00000576033 ARHGEF25Q86VW2 580 aa10.9□□□□□ -0.66
CCDC40-215ENST00000576033 UNC5CLQ8IV45 518 aa10.9□□□□□ -0.66
CCDC40-215ENST00000576033 COG3Q96JB2 828 aa10.9□□□□□ -0.66
CCDC40-215ENST00000576033 LRRC37A3O60309 1634 aa10.9□□□□□ -0.66
CCDC40-215ENST00000576033 AMER1Q5JTC6 1135 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-215ENST00000576033 ZNF772Q68DY9 489 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-215ENST00000576033 EMILIN1Q9Y6C2 1016 aa10.89□□□□□ -0.67
CCDC40-215ENST00000576033 AATKQ6ZMQ8 1374 aa10.89□□□□□ -0.67
CCDC40-215ENST00000576033 ABCC6O95255 1503 aa10.89□□□□□ -0.67
CCDC40-215ENST00000576033 CGNL1Q0VF96 1302 aa10.88□□□□□ -0.67
CCDC40-215ENST00000576033 PER1O15534 1290 aaPredicted RBP10.88□□□□□ -0.67
CCDC40-215ENST00000576033 CC2D1BQ5T0F9 858 aaKnown RBP10.88□□□□□ -0.67
CCDC40-215ENST00000576033 USP35Q9P2H5 1018 aa10.88□□□□□ -0.67
CCDC40-215ENST00000576033 CCDC9Q9Y3X0 531 aaKnown RBP10.88□□□□□ -0.67
CCDC40-215ENST00000576033 KCNH5Q8NCM2 988 aa10.87□□□□□ -0.67
CCDC40-215ENST00000576033 LTV1Q96GA3 475 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-215ENST00000576033 TRPC5Q9UL62 973 aaPredicted RBP10.87□□□□□ -0.67
CCDC40-215ENST00000576033 SHANK3Q9BYB0 1731 aa10.87□□□□□ -0.67
CCDC40-215ENST00000576033 RXRBP28702 533 aa10.86□□□□□ -0.67
CCDC40-215ENST00000576033 VPS72Q15906 364 aa10.86□□□□□ -0.67
CCDC40-215ENST00000576033 FAM98CQ17RN3 349 aaKnown RBP10.86□□□□□ -0.67
CCDC40-215ENST00000576033 GJD4Q96KN9 370 aaPredicted RBP10.86□□□□□ -0.67
CCDC40-215ENST00000576033 PARP4Q9UKK3 1724 aaKnown RBP10.86□□□□□ -0.67
CCDC40-215ENST00000576033 SPATA31A5Q5VU36 1347 aa10.85□□□□□ -0.67
CCDC40-215ENST00000576033 SPATA31A7Q8IWB4 1347 aa10.85□□□□□ -0.67
CCDC40-215ENST00000576033 HOXC9P31274 260 aa10.85□□□□□ -0.67
CCDC40-215ENST00000576033 DDX10Q13206 875 aaKnown RBP10.85□□□□□ -0.67
CCDC40-215ENST00000576033 KNSTRNQ9Y448 316 aa10.85□□□□□ -0.67
CCDC40-215ENST00000576033 ERBB3P21860 1342 aa10.84□□□□□ -0.67
CCDC40-215ENST00000576033 SPATA31A1Q5TZJ5 1347 aa10.84□□□□□ -0.67
CCDC40-215ENST00000576033 CRB1P82279 1406 aa10.84□□□□□ -0.67
CCDC40-215ENST00000576033 SMG6Q86US8 1419 aaKnown RBP10.84□□□□□ -0.67
CCDC40-215ENST00000576033 PPM1GO15355 546 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-215ENST00000576033 RBM6P78332 1123 aaKnown RBP10.84□□□□□ -0.67
CCDC40-215ENST00000576033 HSP90AB2PQ58FF8 381 aa10.84□□□□□ -0.67
CCDC40-215ENST00000576033 USHBP1Q8N6Y0 703 aa10.84□□□□□ -0.67
CCDC40-215ENST00000576033 ANKRD24Q8TF21 1146 aa10.84□□□□□ -0.67
CCDC40-215ENST00000576033 NSD2O96028 1365 aa10.84□□□□□ -0.67
CCDC40-215ENST00000576033 CDK12Q9NYV4 1490 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-215ENST00000576033 RGPD1P0DJD0 1748 aa10.84□□□□□ -0.67
CCDC40-215ENST00000576033 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
CCDC40-215ENST00000576033 WDR17Q8IZU2 1322 aa10.84□□□□□ -0.67
CCDC40-215ENST00000576033 RTL1A6NKG5 1358 aa10.83□□□□□ -0.68
CCDC40-215ENST00000576033 EVA1CP58658 441 aa10.83□□□□□ -0.68
CCDC40-215ENST00000576033 FAM182BQ5T319 152 aa10.83□□□□□ -0.68
CCDC40-215ENST00000576033 POLKQ9UBT6 870 aa10.83□□□□□ -0.68
CCDC40-215ENST00000576033 MEGF6O75095 1541 aa10.83□□□□□ -0.68
CCDC40-215ENST00000576033 DISP2A7MBM2 1401 aa10.83□□□□□ -0.68
CCDC40-215ENST00000576033 COL3A1P02461 1466 aaPredicted RBP10.82□□□□□ -0.68
CCDC40-215ENST00000576033 FLT4P35916 1363 aa10.82□□□□□ -0.68
CCDC40-215ENST00000576033 CSB-PGBD3P0DP91 1061 aa10.82□□□□□ -0.68
CCDC40-215ENST00000576033 AMPHP49418 695 aa10.82□□□□□ -0.68
CCDC40-215ENST00000576033 TOM1L2Q6ZVM7 507 aa10.82□□□□□ -0.68
CCDC40-215ENST00000576033 MORC1Q86VD1 984 aa10.82□□□□□ -0.68
CCDC40-215ENST00000576033 IP6K1Q92551 441 aa10.82□□□□□ -0.68
CCDC40-215ENST00000576033 A0A0G2JS52 829 aa10.81□□□□□ -0.68
CCDC40-215ENST00000576033 MYT1Q01538 1121 aa10.81□□□□□ -0.68
CCDC40-215ENST00000576033 SEPT12Q8IYM1 358 aa10.81□□□□□ -0.68
CCDC40-215ENST00000576033 TNS1Q9HBL0 1735 aaKnown RBP10.8□□□□□ -0.68
CCDC40-215ENST00000576033 INSRP06213 1382 aa10.79□□□□□ -0.68
CCDC40-215ENST00000576033 DIEXFQ68CQ4 756 aaKnown RBP10.79□□□□□ -0.68
CCDC40-215ENST00000576033 NLRP2Q9NX02 1062 aa10.79□□□□□ -0.68
CCDC40-215ENST00000576033 PKD1L3Q7Z443 1732 aa10.78□□□□□ -0.68
CCDC40-215ENST00000576033 EIF4A2Q14240 407 aaKnown RBP10.78□□□□□ -0.68
CCDC40-215ENST00000576033 NBPF6Q5VWK0 638 aa10.78□□□□□ -0.68
CCDC40-215ENST00000576033 TCP11L2Q8N4U5 519 aa10.78□□□□□ -0.68
CCDC40-215ENST00000576033 NBPF4Q96M43 638 aa10.78□□□□□ -0.68
CCDC40-215ENST00000576033 DOT1LQ8TEK3 1739 aa10.78□□□□□ -0.68
CCDC40-215ENST00000576033 TOGARAM1Q9Y4F4 1720 aa10.78□□□□□ -0.68
CCDC40-215ENST00000576033 NPC1L1Q9UHC9 1359 aa10.77□□□□□ -0.68
CCDC40-215ENST00000576033 SBF2Q86WG5 1849 aa10.77□□□□□ -0.68
CCDC40-215ENST00000576033 TNS2Q63HR2 1409 aa10.77□□□□□ -0.68
CCDC40-215ENST00000576033 CARD10Q9BWT7 1032 aa10.77□□□□□ -0.69
CCDC40-215ENST00000576033 PARD3Q8TEW0 1356 aa10.77□□□□□ -0.69
CCDC40-215ENST00000576033 NCAPD2Q15021 1401 aa10.76□□□□□ -0.69
CCDC40-215ENST00000576033 MTHFSP49914 203 aa10.76□□□□□ -0.69
CCDC40-215ENST00000576033 ONECUT3O60422 494 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-215ENST00000576033 PPP2R1AP30153 589 aa10.75□□□□□ -0.69
CCDC40-215ENST00000576033 BARGINQ6ZT62 677 aa10.75□□□□□ -0.69
CCDC40-215ENST00000576033 AEBP1Q8IUX7 1158 aa10.75□□□□□ -0.69
CCDC40-215ENST00000576033 KIF24Q5T7B8 1368 aa10.75□□□□□ -0.69
CCDC40-215ENST00000576033 EYA1Q99502 592 aa10.74□□□□□ -0.69
CCDC40-215ENST00000576033 OVOS2A0A0G2JMS6 1433 aa10.74□□□□□ -0.69
CCDC40-215ENST00000576033 VIRMAQ69YN4 1812 aaKnown RBP10.73□□□□□ -0.69
CCDC40-215ENST00000576033 PTF1AQ7RTS3 328 aa10.73□□□□□ -0.69
CCDC40-215ENST00000576033 KRT27Q7Z3Y8 459 aa10.73□□□□□ -0.69
CCDC40-215ENST00000576033 NHSQ6T4R5 1651 aa10.73□□□□□ -0.69
CCDC40-215ENST00000576033 IL13P35225 146 aa10.72□□□□□ -0.69
CCDC40-215ENST00000576033 MARCH10Q8NA82 808 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-215ENST00000576033 SOCS7O14512 581 aa10.71□□□□□ -0.69
CCDC40-215ENST00000576033 HMOX1P09601 288 aa10.71□□□□□ -0.69
CCDC40-215ENST00000576033 IL2RBP14784 551 aa10.71□□□□□ -0.69
CCDC40-215ENST00000576033 IGSF1Q8N6C5 1336 aa10.71□□□□□ -0.69
CCDC40-215ENST00000576033 UPF1Q92900 1129 aaKnown RBP eCLIP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms